Anoplopoma fimbria (sablefish): 129113661
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Entry
129113661 CDS
T09102
Symbol
frem2a
Name
(RefSeq) FRAS1-related extracellular matrix protein 2a
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129113661 (frem2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
afb04091
]
129113661 (frem2a)
Lectins [BR:
afb04091
]
C-Type lectins
Lecticans
129113661 (frem2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Cadherin_4
DUF3377
Motif
Other DBs
NCBI-GeneID:
129113661
NCBI-ProteinID:
XP_054482057
LinkDB
All DBs
Position
24:complement(13339484..13390754)
Genome browser
AA seq
3125 aa
AA seq
DB search
MLLHRLLLCFSLTGIVLAQPDSSGLFYALRSELSEDAILVANNGIRVPFGRSVFIDPIND
LVIQTQPGDRCSITVLENDPLSQRPGHLSPKKFPCDFGPNDVTYVHYGSRSPARDRVRLQ
LRYDAQTETVIIPFMMEVEVVFTQLELLTKNMPLTVDNLKATSNPIDKKILEFTYDRDSY
KCEVTSLTSGSQLPRYGRLVDEGKLSKMMDCDEFTRADIRYEHTFERKSPNRDYVPMVVE
LHDKEGNLVTQEYFHLMIRIKEGEENTPPKPSFVSMMMMEISQFVMTALTPDMLAAEDAE
SDPDELIFNITSPLSYEEGYIVSTDDRNLPITSFYQRDLQDLKIAYKPPSLDSDTERIFQ
LEFEVVDTDGAISDPFAFMIVVKPMNSLAPVVTRNTGQLLYEGQSRPLFSAHNLEISDED
NLDTVTITVVDGLRHGALMVLGSHRKLFTPADLTTGVVVYQHDGSDTYSDNIVFKMSDGK
NEVEFLFPITIVPTDDEPPIINANTGLVLFKNQMMLISPLMLSAADIDSEDSTIKFTIVT
PFSTIGTVLLRQSDAPEDPSSWKFNAEDEVYEKEVQEWLQKDITDGKLFYKHTGPHSTDT
IMDQFVFTVQDDNDPPNESGESAFIIRVLPIDDIPPELYPGTTLQMTVQEFKLTHFNKEV
LRYTDLDSEDRDLKYTVIQPPMDTDENNPAVFGSLVLTDSPDTEVTEFTQAQINHHKISY
GPPDVELGITAHVVQFRYTVEDTAGNSVEGAFTIYLEPVNNKPPQITNTGFTVFERGMHI
ISIAELDATDLDTESKQITFTLSQPAKHGQVQAAFTDLEKKAVFRLEDISEGKISYSHGG
EETRSDEFQLDVSDGIHVVTVTVKVNVKPVDDETPTVNLPPGTIGSHMDVLENGATEITT
NVIQGHDDDTDDLLLTFIVEDPPAMGEILVKGVPATRFTQADIINGVVVYAHTGGEIGLS
SEQDGFNLTLTDMSDDWTVGGNKVNGVHVRVTILPVDSQAPEVGVGIQFSVIEGAKYAIG
PQHLNADDNDTPTDDILCTIIVQPTAGYVENVSPAPGSEKSRSGTAISAFTIRGIREGSI
HYVQSIHKGVEPVEDRFTFRCSDGINFSENHFFPIVIIPSNDEKPEIYLREIVVMEGMNV
VIDTPILNGADADVPPEELMFIISKPPKHGVILNQLSTGSVLVTNFTLEQIREASSIIYE
HDDSETTEDSFDVTLTDGKYSVQKTAKVMIIAVDDETPRMLINDGLEVEIGETKEINNKV
LKATDLDSDDSTLTYITQFGPAQGLLQRKTPSGSLENITLGMNFTQADIDAGLLLYTHNG
QEGIRDLLKFDVTDGMNPLIDRYFYITVGSIDMVFPDVVSKGVSLREGGRVTLTTDLLST
TDLNSPDENLIFTVTRAPVRGHLECTDTPGMPIVDFSQLQLAGSKIYYIHTSDDEVKMDS
FEFEVTDGYNPIFRTFRVSIVDVDNKKPVVTVNSLVVTEGQIKLITPFELTAEDQDTAEK
LLKFSVTQLPVHGKLLYNKSTPVTSFTKQDLNENLISYKHDGTESSEDSFSFTVTDGTHT
DFYVFPDTVFETRRPQTMKITIVASDNGIPQIVVNRGAPALKILATGHLGFPISPKVLRA
EDRDSTLASLVFHVTTQPKHGYIVNLAQGNNSIITFSQADIDDLNICYVLRNEENATSDL
FHFSVEDNGGNKLKGQQFRLDWAWISLEKEYYVVDEEDKFLEVVLRRRGYLGETSFIGIG
TQDGSAKKDEDFKGKSQRQVQFNPGQTRATWRVRILTDGKYEQAETFQILLSEPVMGVME
FPTTATVEILDPSDESTVFFPEQIHTVEEDVGELFIPVHRSGDISQELMVVCYTQQGSAS
GTIPTTVLSYSDYISRPEEHVSVLRFDKGEREKHCRVVIIDDSLYEGDESFNVTLSLPVG
GRLGMHYPTSKVNILEDMDDAPVFYFGEVKYHVDESDGYVEVKVWRTGTDLSKTATVTIR
SRKAEPVSAEAGIDYVGISRNLDFAPGVSMQTFRVTILDDLGQPELEGTENFELVLHMPV
NGILGEPGKATVFINDSVSDLPKVQFREPVYSGEESDGQITATVYRSGDIRHKSTVRCYT
RQGSAQVASDFDERPNTETSIITFLPGEREKPCILSLVDDTLFEEGEELRLVLGNPDSDS
QFGASTGALKETLVKIKDTDDKPIIRFLGTKFSVSEPKEAGAVATVRIPVVRVGDTSKVS
VVRVHTKDGSAISGEDYFPVSQDIEFKEGDKEHVVEVEVLFDGVREMREAFTLHLKPDEN
MVAETQVTKMIVYIEETNSMADVTFPSLPHVVSLLHYDDVARTPDNLLPPAGYPVICVTA
CSTKYPDYDKTGSICVSEHINNTLTHYRWLISAPAGPDGVTSPMREVDFDTFFTSSKMIT
LDSVYFQAGSRVQCAARAVNSNGDEGLELSSPIVTISQEEGMCQPRKMGTVGAEPFSAKL
RYTGAEDPKHPNLIKVTVTMPHIDGMLPVISTRPLMNFELTLSPDGTRVGNHRCSNLLDY
NEVTTGHSFITALTRSPESMGDTAPYQFSNSLRGNSTLRFYRNLNLEACLWEFTSYYHMS
ELLTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGSGGWQHFDLQSELRLTFVY
DTAILWKDGIGSPPKAELQGALYPTSMRINEQGRLVVNFRTRARFRGLFLESHSGGGIKR
TASFMSSMVMSVDHPGLTFNLTLVRSEPTYNQPVQQWTFTSDFAVRDYSGTYTVKLIPCT
TAQNMEYTLPPVCSPREPVTFDLDIRFQQVSDPVAVEFSLNTQMFLLSKRSLWLSDGSMG
FGQETDIAFSEGDTIYGRVMVDPVQNLGDSFFCSIEKVFLCTGADGYVPKYNPTKFEFGC
LADSPSLLYRFKIIDKAQPETQARVFGDVSFNAALAVDDPSAMSLVKQPGSDGFRVDSTA
MFQVAAGREWYIHTIYTVRSKENANRGIGKRSLEYHSLVSTSNDIALTSSSGKGQRSRRS
AGDEVPEIADDIGADNNRGTNIMHIALDRTKRQAGGSNELFKNGLEPSELNTEEEEEGLV
TMVGALVGLLLTVLIIVTIVLVLRSRQKDGKEGWREGVEEVVKGSVSTEPMLVVRMQDCH
NSSEV
NT seq
9378 nt
NT seq
+upstream
nt +downstream
nt
atgttgctccatagacttctcctgtgtttctcactaacaggtatcgttctcgcgcagccc
gacagctctggactattttacgcgctgagatctgaactgtcagaagatgcaatcttggtg
gccaacaacggaatacgtgttcctttcgggagatcggtcttcatcgatcccatcaatgat
ttggtgatccagacgcagccgggggaccggtgcagcatcaccgtcctggagaacgatcct
ctctcacagagaccggggcatctctcgcccaaaaagtttccgtgtgatttcggtcccaat
gacgtgacatacgtgcactacggctccaggagtccggctagagacagagtgcgtctgcag
ctcaggtatgacgcgcaaaccgaaaccgttatcatcccgtttatgatggaggttgaagta
gtttttactcagctagaattactcaccaaaaacatgcctctcactgttgataatctcaaa
gcgaccagtaaccccattgataagaagattttagagtttacttatgacagagactcttat
aaatgcgaggtcacatccctgactagtggcagccaactgccgagatatggaagactcgtt
gacgaggggaaactttccaaaatgatggattgtgatgaattcacacgagctgacatccgc
tatgagcacacgtttgaacgcaagtctcccaatagggactatgttcccatggttgtggag
ctgcatgataaggaagggaacttagtgacacaggagtatttccatcttatgattcgcatc
aaagagggggaggaaaacactcctcccaaacccagctttgtgtccatgatgatgatggag
atcagtcagtttgtcatgaccgccctcacgcctgatatgctcgccgctgaggatgccgag
tcagacccagatgagcttattttcaacatcacctctcccttatcttatgaggagggctac
atagtcagcactgatgacagaaacctccccatcacatcattctaccagagagacttgcaa
gatctgaaaattgcttacaagcccccctccctggactcagacactgagaggattttccag
cttgagtttgaggtggtagacacggacggggccatctcagacccctttgcctttatgata
gtcgtgaagccgatgaactctttggcccctgttgtgacacgtaacacgggtcagctgctg
tacgagggccagtctcggcctctcttcagcgcccacaacctggagatcagcgacgaagac
aacctggacacggtcaccatcacagtggtggacgggctgcgccacggggccctcatggtg
ctgggctcccacaggaaactcttcacacctgctgacctcacaacaggtgtcgttgtgtac
cagcacgatgggagcgacacatacagcgacaacatcgtctttaagatgtcagatggaaaa
aacgaagtagaattcctgtttcctattacaatcgttcccactgatgacgagccaccgatt
ataaacgccaacaccggcctggtgctattcaaaaaccagatgatgcttatatctcccctc
atgcttagcgccgcagatattgactctgaggactccactattaaattcaccattgtaact
cccttttccaccattggcacagtgctcttaagacagtcagatgccccggaggacccatcc
tcttggaaattcaatgctgaggatgaagtgtatgagaaggaggtgcaggagtggcttcag
aaagacatcactgatggaaagttattttacaagcacacaggccctcacagcacagatacc
atcatggatcagtttgtgttcacagttcaggatgacaacgacccccctaatgagtcagga
gagagtgcatttataattcgggttttacccatagatgacatcccccctgagctgtaccct
ggcaccaccctgcagatgactgttcaggagttcaagctcactcactttaacaaagaagtt
ctgcgctacaccgatttggactctgaggaccgtgacctcaaatatacagttatccagccc
ccgatggataccgatgaaaataacccagctgtgtttggttctttggttctgacagatagc
ccagacactgaagtcactgagttcacacaagctcaaattaaccaccataaaatctcctac
ggccccccggatgttgagctcggaattacagcccacgtggtgcagtttcgttacactgtt
gaagacacagctgggaacagcgtagaaggagctttcactatttacctcgagcccgtcaac
aacaaaccccctcagattacaaacacaggctttactgtgtttgaacgcggaatgcacatc
atcagtattgcggagctagacgccacagacctcgacacagagagcaaacagattacattt
actctgagccagcccgctaaacatggccaggtccaggctgcattcactgatctagagaaa
aaagcggttttcagacttgaggatatctcagaggggaagatatcgtacagtcatggtggg
gaggagacaaggagcgatgaatttcagctggatgtcagtgatgggattcatgttgtaacc
gtgacggtcaaagttaatgtaaagccggtcgatgatgaaactccaaccgtcaacttgcct
ccggggacaatcggctcacatatggatgtgctggaaaacggagccacagaaatcacaaca
aatgtcattcaaggccatgatgatgacacagatgacctcttgctgacctttattgtggaa
gatcccccagcaatgggtgaaatactggttaaaggagtgcctgcaacaaggtttacacag
gctgatattattaatggcgtagttgtgtatgcacacactggtggggagataggtctctcc
tctgagcaggatggcttcaatttgactctcacagacatgtccgatgattggacggtgggt
ggaaataaggtcaacggggtccatgttcgagtcactatccttcctgttgacagccaggcc
cctgaggtcggggttgggattcaatttagtgtcattgaaggggcgaaatacgccatcggc
cctcagcacttgaacgctgatgataatgacactccgacggatgatatcctttgcaccatc
attgtccagcccactgccggctatgtggaaaatgtatcacctgccccaggctcagaaaag
tccaggtcaggaacagctatcagtgctttcactatcagaggcatcagggaggggagtatc
cactatgtgcagagcattcacaaaggggtagagccagtggaagacaggttcacatttagg
tgctctgatgggatcaatttctcagagaaccatttcttcccaattgtcatcatcccatca
aatgatgaaaagccagagatttatttgagggagatagtcgtgatggagggaatgaacgtc
gtcatcgacactccaattctgaatggtgccgacgccgatgttccacctgaggagctgatg
ttcatcatttccaaacctcccaaacatggtgtcattttaaaccagctatccaccggctca
gttttggtgactaatttcactttagaacagattagggaggcatcaagtattatttatgag
cacgatgactcagagacaacggaggacagctttgatgtcactctgactgatggaaagtac
tctgtgcagaaaacagccaaggttatgatcattgctgtcgatgacgagacccccagaatg
ctcatcaacgacggcctggaggtggaaatcggggagaccaaagagatcaacaacaaagtg
ctcaaagcaacagatttagattcagatgacagtacgctcacatatatcacccagttcggg
cctgctcagggtctcctgcagaggaaaaccccatccgggtctctggagaacatcacgctg
ggcatgaatttcacacaagctgacatcgacgcagggcttttactctacacacacaacggt
caggagggcatccgagacttgcttaaatttgatgtcacagacggcatgaacccactaatt
gatcgttacttctacattactgtgggcagtattgacatggtgttccctgatgtggtcagt
aaaggtgtgtccctgagagaaggtggcagagtgactttgaccacagatcttctcagcact
actgatctcaacagccctgatgagaatttaatcttcactgtcacaagggcccctgtcaga
ggccacttggagtgtacagatactcctgggatgcccattgtggatttttctcagctccag
ctggctggcagtaagatttactacatccacacctcagacgatgaggtgaaaatggacagt
tttgaatttgaagtcactgacggctacaatcctattttcagaaccttcagagtctccata
gtggatgttgataataagaaacccgttgttactgtaaatagtttggttgtcacagaaggg
cagattaagctgattacaccatttgagctcaccgcagaggaccaggacacagccgaaaag
ctgctgaagttctcagtcacacagctgcctgttcatggtaaactcctttacaacaagtcc
acacccgtcaccagcttcaccaaacaagacctcaatgaaaaccttatcagctacaaacac
gacggaaccgaatcatcagaggactccttctcctttacagtcaccgatggcacacacact
gacttttacgttttcccggacactgtgttcgagactcggcgccctcagaccatgaagatc
accattgtggcttctgacaacggcatcccccagatcgtggtgaacagaggtgcacctgct
ttaaagatcttggccacgggtcacctggggttccccatcagccccaaagtgctgagagca
gaggacagagacagcaccctggcctccctggtgttccacgtcaccacgcagcccaaacat
ggctacatcgttaatctggcacaagggaacaactccatcatcacatttagtcaagctgat
attgatgacctgaacatctgctatgtgttgcggaatgaagaaaatgctacttctgatctc
ttccatttctccgttgaggataacggtgggaacaagctcaagggacagcagttccgtctg
gactgggcctggatctctctggagaaagagtactacgtggtggacgaggaggacaagttc
ctggaggtggtgctcaggcggagaggctacctgggagagacgtctttcattggcattggc
acccaggatggtagtgccaagaaggatgaggatttcaagggaaagtcccagaggcaggtc
cagttcaacccgggacagaccagagccacgtggcgggttcggatattgactgacgggaag
tatgagcaagcggagaccttccagattttgctatcggagccggtgatgggggtgatggag
ttccccaccacagcaacagttgagatcctggatcctagtgacgagtcgactgtgttcttc
cctgagcagatccacaccgtggaggaagatgttggcgagcttttcatcccggtgcaccgc
agtggagacatcagccaggagctcatggtggtctgctacactcagcagggttctgcctca
gggacgattccgacaaccgttctgtcttactcggactacatctcccgtccggaggagcat
gtcagcgtccttcgcttcgacaagggtgagagggagaagcactgtcgtgttgtgatcatc
gacgactctctgtacgagggagacgagagcttcaacgtcactctgtcactgcctgtcggg
gggcgtctgggaatgcactaccccaccagcaaagtcaatatcctggaagacatggatgat
gctccagtgttttactttggtgaggttaagtatcatgtggatgagagtgatggatatgtg
gaggttaaagtgtggaggacagggaccgatctgtccaagaccgccaccgtcaccatccgc
tctcgcaaggccgagcctgtctctgcagaagctggtattgactacgtgggcatcagtcgt
aacctggacttcgccccgggcgtcagcatgcagacgttcagggtcaccattctggatgac
ctgggacaaccagagctggaggggactgagaactttgagcttgtccttcatatgccagtg
aacggcatcctgggagaacctgggaaggctacagtcttcattaatgactctgtgtctgac
ttgccgaaggtacagttccgtgagccggtatacagtggagaggagagtgacggtcagatc
acagcaacagtgtaccgcagtggagacatcagacacaaatccactgttcgctgttacacc
cgtcagggctctgcacaggtcgcctctgactttgatgagcgaccaaacacagaaacatct
atcatcactttcttaccaggcgagagagagaagccatgtattctgtcactggttgatgac
acgctgttcgaggaaggagaagagctgcggttggtcttaggaaacccggatagcgattca
cagtttggagcatcaacgggagctctgaaagagacactagtgaaaataaaggacacagac
gacaaacccatcattcgttttttgggaaccaagttcagtgttagtgaaccgaaggaagcc
ggcgccgtggcaactgtgaggatccctgtggtaagagtgggtgacacatcaaaagtgtca
gtggtccgtgttcacaccaaagacgggtcagctatctcaggagaggactacttccccgtg
tctcaagacattgagttcaaagagggggataaggaacacgtggtggaggtggaggtgcta
tttgacggcgtccgagagatgagggaagcgtttactctccacctgaagcctgatgaaaac
atggtggctgaaactcaggtcactaaaatgatagtttacatcgaggagaccaacagcatg
gctgatgtcaccttcccctctctgcctcatgtggtatcactgctccattatgacgatgtc
gccaggacaccagacaacctccttccaccagccggctaccctgtcatctgtgtcacagct
tgcagcacgaaatacccagactatgacaagacgggctctatctgtgtcagcgagcacatc
aacaacaccttgacccactaccgctggctcatcagtgccccagctggccctgatggcgtc
accagtcccatgagggaggtggactttgacactttctttacgtcctccaagatgatcaca
ttggactcagtctacttccaggctggctccagggtccagtgtgctgctagagccgttaat
tctaatggggatgagggtttagagctcagtagccccatcgtcactatcagccaggaggaa
ggtatgtgtcaaccacgtaagatggggaccgttggcgctgagccgttctctgccaagcta
cgctacactggagcagaggacccgaaacaccctaacctcatcaaagtgactgtcaccatg
cctcatatagatggtatgcttccggtaatctccactcgccctctcatgaactttgaactg
actctgagtccagacggaacccgcgttggaaaccaccgctgctccaacttgcttgactac
aatgaggtcaccacaggtcacagcttcatcaccgctttgacgcgcagcccagaaagcatg
ggagacacagcaccctatcagttcagcaattctctgcggggtaacagcacattgcgcttc
tacaggaaccttaacctggaagcctgtctctgggagttcaccagctactaccacatgtcc
gagctgctcacagactgtggaggcaccatagggactgatggacaggtcctaaatctggtc
cagtcctatgtgactctgcgtgtgcctctctacgtgtcttatgtgttccactctcccgtg
ggatccggcggctggcagcactttgacctgcagtcagagctgcgcctcacttttgtgtat
gacacggcaattctctggaaggatggcatcggcagtcccccgaaggctgagttacagggt
gcattgtatccaacaagcatgcgcatcaatgaacagggacgtttggtggtaaacttccgc
accagggctcgtttcaggggtctgttcttggagtctcattctggaggcggaataaaacgt
actgcatccttcatgtcatccatggtgatgagtgtggaccaccccggcctgacctttaac
ctcaccttagtgaggagtgagcccacctacaaccagccagtccagcagtggaccttcacc
tctgactttgctgtgagagactactctgggacctacacagtgaagctgatcccctgcaca
acagcccagaatatggaatacactcttccacctgtctgcagtcccagagaaccagtcacc
ttcgatctagacatcagattccagcaagtgagtgacccggttgcagtggaattcagtctg
aacactcagatgttcttgctgtccaagaggagcttgtggctctctgatggctccatgggc
tttggtcaggagactgacatagccttttctgagggtgatacgatctacggccgtgtgatg
gtggaccctgtgcagaacctgggggactctttcttctgtagcatagagaaagtgttcctc
tgcaccggtgctgatggatatgtaccaaagtacaaccccactaagtttgaatttggctgc
ctggctgactccccctcactgctctatagattcaagattattgacaaggctcaaccagag
actcaggcacgtgtgtttggtgatgtcagttttaatgctgcgctggcagtggatgatcca
tcagccatgtccctcgtcaaacagcccgggtctgatggctttagggtcgactctacagcc
atgttccaggttgctgcaggccgtgagtggtacattcacactatttacacagtccgctcc
aaagagaatgctaacagaggaattggaaagcgcagcctggagtatcactccttggtttcc
acaagcaatgatatcgccttgacctcatcgagcggcaaaggtcaacgctccaggaggtcg
gctggtgatgaagtcccagagatagccgatgatatcggagcagacaacaaccgtggtacc
aatatcatgcacatcgctttggaccgcaccaagagacaggcaggggggtcgaatgagctg
ttcaaaaatgggcttgaacctagtgaactgaacacagaggaggaagaagaaggtctggtg
actatggtgggggcactggtggggctgctgctgaccgtcctcattattgtcaccattgta
ctggtgctgagatccagacagaaggatgggaaggagggatggagggagggggtggaggag
gtggtgaaagggtctgtcagtacagagcccatgttggtggtgaggatgcaagactgccac
aacagctcagaagtctga
DBGET
integrated database retrieval system
