Anoplopoma fimbria (sablefish): 129113706
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Entry
129113706 CDS
T09102
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129113706
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
afb03310
]
129113706
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129113706
Nuclear receptors [BR:
afb03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
129113706
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129113706
NCBI-ProteinID:
XP_054482127
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All DBs
Position
3:24401443..24417330
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AA seq
503 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKSQECVGSAGGGTTALSIP
KEDGVCGGGGEDSEEGLSRSYSSGASSSTLSDLDDIAALPDLFDLPLTPDEASEYCSLEL
LGGGASTGNTSNSSPASSSSSSLSNQNSPQQTMLDGADATGIQLLHTHSLTHPLLEHTHA
LLDHLPDDCSITDLERITQSILKSHLETCQYSAEDMKRFTWAQYTPEETRSFQNKSAEWM
WQQCAHHITNAVQYVVEFAKRIAGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNVNNSTI
FFNGKFALAQFFKALGCDDLVSAVFDLGKGLCRLQLSDEEMALLSAVVLLSPDRPWLTEG
QKIQKLQEKVYLALQHSLHKSGASDEKLDKMVSKLPIMKSICNLHIDKLEFFRLVHPETA
YSFPPLYREVFGSEMSLPDSTNR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcagatcgaggtcatcccctgtaagatctgtggggacaagtcctcaggaatc
cactatggagtcatcacatgtgaagggtgcaagggtttcttccggcgcagccagcagaac
aatgccatgtactcttgttcccgccagaggaactgcctgatcgaccgaactaaccgcaac
cgctgccagcactgtcgcctacagaagtgtctggctttgggcatgagcagagatgcggtc
aaatttggtcgtatgtccaagaagcagcgtgacagcctatacgccgaagtgcaaaagcat
caaaagtcccaggagtgtgtgggctccgctggcgggggcaccactgctctgtccataccc
aaggaggacggcgtctgtggcggtggcggagaggatagtgaagagggtctgagccggtcc
tacagcagcggggcctccagctccaccctcagcgatctggatgacatcgcagcgctgccc
gacctgtttgacctgccgctgacccccgacgaggccagcgagtactgcagtctggagctg
ctcggcggtggagccagcaccgggaacacctccaactcgtcgccagcttcttcctcgtcg
tcgtctttgtccaatcagaattccccgcagcagactatgctggacggggcagacgccacc
gggatccagctcttgcatacacactctctcacgcatccgctgctggaacacacacatgca
ctgctggaccatctgcctgatgactgctcaataacagaccttgagcgcatcactcagagt
attctcaagtctcacttggaaacgtgtcagtacagcgctgaggacatgaaaagattcacc
tgggcacaatatacacctgaggaaacgcgttcttttcaaaacaagtcagctgagtggatg
tggcagcagtgtgcacaccacattaccaatgccgttcagtatgtggtggagtttgccaaa
cgcatcgctggcttcatggacctgtgccagaatgatcagattatattgctgaaagcaggc
tgtctggaggtcctgctgatacgcatgtgccgagctttcaacgtcaacaacagcaccatt
ttcttcaatggaaagtttgccctggctcagttcttcaaagcacttggttgtgatgacctg
gtcagtgcagtgtttgacctgggaaaaggactctgccgtctacagctatctgatgaagag
atggccctgttaagcgctgtcgttcttctttctccagatcggccctggctaacagaaggc
cagaagattcagaagctccaggagaaggtctacctggctctgcagcacagtctacacaag
agtggagcttcagacgagaaactggacaagatggtgtccaagctgcccataatgaagtct
atctgtaacctccacatagataaactggagtttttccgtttggtccacccagagaccgcc
tacagtttcccaccgctgtaccgggaagtgtttggcagcgagatgtctctgccggactcc
accaaccgctag
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