Anoplopoma fimbria (sablefish): 129113710
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Entry
129113710 CDS
T09102
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129113710 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129113710 (nfrkb)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
129113710 (nfrkb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
129113710
NCBI-ProteinID:
XP_054482129
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Position
24:11233495..11242456
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AA seq
1290 aa
AA seq
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MDALTHMLTDSLDPKEEEEEEEEEEEEEEDDGQITEECMLGNCRLNLPEDLLEDPEIFFS
VLSANTWSEVLSDSQRQHLRQFLPEFPDNNVAEQDSTISDLFNNRNFNFGNPLHLAQKQF
RDGYFNPEVVKYRQLCAKSQRKRQLYSLQQYYHKLLKHILVSRKELLEFAVHSGLDFPPK
RKLPTKTQAEMREPRVRRRLSRILKEVKTECGDSNASSDDDDISLWAPAPQSPSSPTPTV
SLRVLPSLSTQDMKTTEGIELGEQDLKAMLHNHREKRKRQPNHPDLMTSDIHLGDILSRA
NIGRKGAVAFFDLSLPKKKIKDERRKKKMRTIKVESEEPCEILAPSDTPSAPTASIINSL
PDNPSTPLANIKEEIVEECQSSPAPVEEIAISFFSLLESILKAENFTSTSLLEDKVQIWQ
SSPASSLNVWFSSVPCWSDLVLQALQFLAGETKDGMMALPSGFSPFVEFADESQQWSWIG
PTQDTEKDISALCQLWLDSKDLVIKTENEDMLEMTSPIPRVSTDYVVRPSTGDERQVFQI
QEQQRYNQPHKAFTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLV
RDAAARLPNGEGTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIG
RKLWIYLHRSRSQEEFERIHQAQAAAAKARKALQQKPKPASKPKSGSKDGGGKTPGCLDG
GQDVVSNPMSPTPTTPTPNTPGTPKSPLPCTAPTPIKTGVPDSIKTSTGVLLVSPPSLPQ
LGTILPTSQACPPVSQPVTSQHTARIVSHLAAGSLPQVRVVSAQPGLVSSAGSQQATLVH
QTPHQIRMPVSMANKGITQTVVSVPLRSQSASSPVHVSTTRSVSTVAVAKPQARSPGSLV
NNPASPAILQGVAGTSIKQVSITGQLGMKTAGGGGIPITATNLRIQGKDVLRLPPSSITT
DAKGQTVLRITPDMMATLAKSPVATVKLSPDFLGTAGTGSKSISATLHVTPPHSSPSSAS
GSTSCTGEVLTSKAGSVASSLLKAAGDTAIRLMPTLAVTMADQKSRTFTTVSSADKSGAT
IRIMPGLGVIPQKQGQTITVTTTTGSKTLTASTCANIVTMAASVVAGAKGITVAPGVSCS
PLTLGTATATVRQVPATVVTTQTGKLPTRITVPLSVLNQPLKSKSVVTTPMVKGSLNTNI
SSLGRNIILTTMPAGTKLIAGNKPVSFVTAQQFQQLQQQGQATQVRIQTVQAQQLQQHIA
TGSPKSVSTVVVTTAPSPKRAPDPPPAPKQ
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctcacccacatgctcactgactctctggatccaaaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagatgatggacaaatcacagaggaatgcatgctg
gggaactgtaggttaaaccttccagaggacctacttgaggaccctgaaatcttcttctct
gtgctgagtgcaaacacctggagtgaagtactgtcagactcccagagacagcacctgcgt
cagtttttgccagagtttcctgacaacaatgttgcggagcaggacagcaccatcagtgac
cttttcaacaacagaaacttcaactttggaaatccccttcatcttgcacagaaacaattc
agagatggttacttcaatcctgaggtggtcaagtacagacaattgtgtgccaagtcccag
agaaagagacagttgtactcccttcagcagtattaccacaagcttttgaagcacatcctt
gtctccagaaaggagctgctggagtttgccgttcacagtggtctggactttccccctaaa
agaaagttaccgaccaagactcaggctgaaatgcgggagccaagggtgagaagacgattg
agtcgcatattaaaggaggtcaaaactgagtgtggagacagcaatgcttcatctgatgat
gacgacatatcattatgggctccagcaccccaatcaccttcctctccgacacccactgtc
tcgctcagagttcttccaagcctctccacccaagacatgaagactactgaaggaatagaa
ctaggggagcaggacttaaaagccatgctgcataaccatcgggagaagaggaagcgacag
ccaaatcatccagacttgatgacctctgacatccaccttggagacatactctcaagagcg
aatatcggtcggaagggggctgtggcattttttgatctgtctctgcctaagaagaagatc
aaagatgagaggaggaagaagaaaatgaggacaataaaagtggaatctgaggagccctgt
gaaattcttgcaccctcagacaccccatcagctccaacggccagcatcatcaactccctg
ccagacaacccgtctactccactggccaacatcaaggaagagattgtggaggagtgtcag
agcagcccggctccagttgaggaaatagctatcagtttcttcagcttgttggagagcatc
ttaaaggccgaaaactttaccagcacttcattgttggaggataaagttcaaatatggcag
tcctctccagccagctccctcaatgtgtggttttcatccgtcccatgttggtccgacttg
gttcttcaagctctgcagtttcttgcaggagagactaaagatggcatgatggcactacct
agcggattttctccatttgtggaatttgctgatgaatctcagcagtggagctggatcggc
cccactcaggatacagagaaggatatcagtgcgctctgtcagttgtggctggactccaaa
gacttggttatcaagacagaaaatgaggacatgctagagatgacttctccgataccaaga
gtctcgactgattatgtggtgcggcccagcactggagatgagagacaagtgtttcaaatc
caggagcagcagcgatacaaccagccgcataaagccttcacctttaggatgcacggcttt
gaatctgtggtggggcctgtcaaaggggtgtttgataaggagatgtctctcaacaaagcc
agggagcacacattgctccgctcagaccgaccgccatatgtgaccattctctctctggtg
cgggacgcagcagccaggttaccaaatggagagggaacaagggcagagatctgtgagctg
ttgaaagactctcagttccttgctccagatgtcaccagtgcacaggtgaacaccgttgtc
agtggagccttggatagacttcactatgagaaagacccctgtgtgaagtacgacatcggc
cgcaagctctggatctacctgcaccgcagtcgcagtcaagaggagtttgagaggatccac
caggctcaagctgctgctgcaaaagcaagaaaagccctgcagcaaaaacctaaacctgca
tctaagcctaagtccggaagtaaagacggaggcggtaaaaccccgggatgtctggacgga
ggacaggatgtagtctccaatcccatgtccccaaccccaacaacacccaccccaaacaca
cccggaacccctaagtcacccttaccctgcacagcccccacaccaataaagaccggagtc
cctgattcaatcaaaaccagcacaggcgttcttcttgtgtctcctccctcgttgccccag
ctgggaaccatcttacccaccagtcaggcttgtccaccagtttcacagccagtcacatcc
caacacacggctcgcatagtgagtcacctggcggcaggctccctccctcaggtccgggtt
gtttctgctcagcctggtctggtttcttcagcaggaagtcagcaggccacgctggttcat
cagacccctcaccagatcaggatgcctgtgtcgatggcaaacaagggcattacacagaca
gtggtttctgtgcctctgaggagtcagtctgccagtagtccagtccatgtgtcaaccacc
cggtctgtgtccactgtagctgtggccaaacctcaagccagatcacctggtagcctggtg
aacaaccctgcttcccctgccattctgcaaggcgtcgccggcacaagtatcaaacaggtg
tccatcacaggccagctgggaatgaagactgccggtggaggaggaattccaataacggct
acaaacctgcgcatccagggtaaagacgtccttcgtcttccaccgtcctccatcaccaca
gacgccaaaggacagacggtgctgcggatcaccccggacatgatggcaactctcgccaaa
tccccagttgcaaccgtcaaactctcgcctgactttctgggtaccgccggcaccggcagc
aagagcatatccgccactctccatgtgacaccaccccactcgtcgccatcctctgcgtcc
ggctctacatcctgcacaggggaagtgctgacctctaaagcgggctccgttgcttccagc
ttgttgaaggccgcaggagacacggccatacgactgatgcccacattggcggtgaccatg
gctgaccaaaaatcaaggaccttcaccaccgtatcctccgccgacaagagtggagccacc
attaggataatgccgggcctcggtgtcattccacagaaacaaggtcagaccatcacagtg
acgaccaccaccggcagtaaaacgctcacggcctctacatgtgctaatatagtgaccatg
gctgccagtgttgtggctggagccaaggggatcacggtggctcctggagtctcgtgttca
cctctgactctagggacagctacagccactgtgcgacaggttcctgctacagtggtcacg
actcaaacggggaagttacctaccaggataactgtgcccctctccgttctgaaccaaccg
ctgaagagcaaaagtgttgtgacgacaccaatggtgaaaggaagtctcaacacaaatatc
agcagtctgggcaggaacatcatcctgaccacgatgcctgctggcacgaagctgatcgca
gggaacaaaccggtcagctttgtcacagcacagcagttccagcagcttcagcagcaagga
caggccacacaggttcgcatccagacggtccaggcgcagcagctccagcagcacattgca
acaggctccccgaaatctgtttccacagtcgtagtcacaacagcaccttcgcccaaacgt
gcccccgatcccccgcctgcacctaaacagtga
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