Anoplopoma fimbria (sablefish): 129113743
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Entry
129113743 CDS
T09102
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129113743
Transcription factors [BR:
afb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129113743
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Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
129113743
NCBI-ProteinID:
XP_054482180
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Position
24:20188268..20211289
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AA seq
877 aa
AA seq
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MKGGGRGKEPPVAGEVTGKRPKRKCLQWHPLLSKKALDFSEEEEEEDEEELEKQPVLCGQ
DQESQVQCGSTTEEVEEDSNEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILAD
WWAVLEPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTSKPVKSPSCQPVSNPRKKVWSFS
SNSTKDSSTAKKVPKTDSMPQLNFAMADPTKMGGLSMLLLAGEHALTNREIPSSTKPSLP
DTASEGNSFPGDEEEMLSGTIPNRVPDLTESRVKCASSPLAESSLSTSPEGKPCRQSALF
QLAEMCLASEAGKMDSAVSQQPEDSSSTASLQQTTVKPEIKEETQDRDDCPPCSHTSAPL
PSLSPVTSTSTDAIPSQLSSQNARVKNKSKKKEVAKSSDTDEIPCSAKKIVKKCNLAESN
MDSVFSTIEAVAKWACNDTEEKPKNKIQSSPSGGNSGVPKKKSKPKVKTLVQDKEEDMEE
DSGQCRQHSASEVEMMEEATDVSPKTETEEAGISTELQGGVVEPHLSPCSPSPAKLKEED
KGKERSSEGTYDSNAESHGSRKSERSCKGALYKTLVSEGMLTSLRANIDRGKRGALRASD
HDANWSDDSWTVSQIGPNNPKKLKKSKSKEECSQGLGKLEEEFERKFNSLPQYSPMTFDK
KGTAVTKKKKTDSPVVQEEVSKAGKGPSPSQKKTSFHKIVRKHKHKKERPGAVDKAVGQS
DSTTPDSASKAKSCAPVAIMCPDVQGTASMEMLVGSQKRKARKTKITHLVRTADGSVSPV
EEDKTRDLNQEEDKKPLPQQNLCNEKGCYSNPRAEEEEEAEETDRSTAPQELPAFFSLAA
LAEVAAMENVHRGQRGLAENPKKELAQTPVLISCADQ
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcggaggaaggggaaaggagccacctgttgcaggggaggtcactggcaaacgc
cccaaacgcaagtgcctgcagtggcacccacttctctccaaaaaggctcttgatttctct
gaggaggaggaagaggaggatgaagaggagctggagaagcagccagtgctgtgtggccag
gatcaggagtcacaggtgcagtgtggaagcacaacagaggaagtggaggaggactcgaat
gaacagcgggcacggcggccgatgaatgccttcctcctcttctgtaaacgccaccgctcc
ctggtgcggcaggaacacccgcgcttggataaccgcggtgccaccaagatcctggctgac
tggtgggctgtgctggagcccaaagagaagcagaaatacactgacatggccaaggagtac
aaggatgcctttatgaaggcgaacccgggctacaagtggtgtcccaccaccagcaaacca
gttaagagcccttcctgtcagccagtcagcaacccccgcaaaaaagtttggtccttctct
tccaactcaaccaaggactcctccactgccaaaaaagtgcccaaaactgacagcatgcca
cagttaaactttgccatggcagatcctacaaagatgggaggccttagcatgctgctgcta
gctggggaacatgccctcacaaacagagagatcccttcaagcactaaacctagtttacct
gacaccgccagcgaagggaactcctttccaggggacgaggaagagatgttgtctgggaca
ataccgaacagggtgcctgaccttactgagagcagggttaagtgtgcctcttccccactg
gcagagtcatctctctccacgtcacctgaaggaaagccatgcagacagtctgctctcttc
cagcttgctgagatgtgcttagcgtctgaagctggaaagatggacagcgcagtgtctcag
cagcctgaggacagctcctccacagcctctctccagcaaaccacagtcaagccagagatc
aaggaggagacacaagacagagacgactgccccccctgctctcacacatcagccccctta
ccttcgctctcccctgtcacttctacctccactgatgccattccctcacaactcagcagc
caaaacgcacgtgtcaaaaacaagagcaagaagaaagaggtggccaagtcaagcgatacc
gatgagatcccctgctcagcaaagaagatcgtcaagaagtgtaacctggccgagtcaaac
atggacagtgtcttcagtacgattgaggcagtggcaaaatgggcctgtaacgacacggag
gaaaagcccaagaacaagatccagagcagtcctagtggtgggaactctggtgtgcccaaa
aagaagagtaagcccaaagtcaagaccttagtccaagacaaagaggaggacatggaggag
gacagcgggcagtgtcggcagcacagtgcctctgaggtggaaatgatggaagaggcgacc
gacgtcagtcccaagacggagacagaagaagcaggtataagcacagagctgcagggcggc
gtggtagagccccacctctccccctgcagcccttcccctgctaaactcaaagaggaggac
aaggggaaggagaggtcgagcgaggggacctatgactccaacgcagagagccacggctcc
aggaagtcagagcggagctgtaaaggagccctgtacaaaaccctggtctctgagggaatg
ctgacttcactgagagccaacatcgaccgaggtaaaagaggtgctctccgtgcctctgat
catgatgcaaactggagtgatgacagctggacagtttctcagataggacctaacaacccc
aagaagctgaagaagtccaagtccaaagaagaatgttcacagggcctagggaaactggag
gaggagtttgaaaggaagtttaacagcctgccacagtacagcccaatgacatttgataag
aaagggaccgctgtcacaaagaagaagaagacagacagccccgtcgtacaagaggaggtc
tctaaagccgggaaagggccatctccatctcagaaaaagacttcattccacaagattgtt
aggaagcacaaacacaaaaaggagagaccaggtgcagtggacaaagcagtgggacagagt
gactccaccacgccggattcagcttcaaaagccaaatcatgtgcccccgttgccataatg
tgcccagacgtccagggcaccgctagtatggagatgctagttggtagccagaagaggaag
gccaggaagaccaagatcacacacttggtgcgcacagctgacggcagtgtgtctccggtc
gaggaggataaaactagggacctgaaccaggaagaggataagaagccattaccccaacag
aatttatgcaatgaaaaagggtgctacagtaatcccagagcagaggaggaagaggaggca
gaggagacagacaggagcaccgcaccacaagagctacctgctttcttcagcctggcagcc
ctcgctgaggtagcagccatggaaaacgttcacagaggccagagaggcttggctgagaat
ccgaagaaggagcttgcccagactccagtcctcatctcctgcgctgatcagtga
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