Anoplopoma fimbria (sablefish): 129113796
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Entry
129113796 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
KO
K18440
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129113796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129113796
Membrane trafficking [BR:
afb04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
129113796
Endosome - Golgi transport
Arf GTPase associated proteins
129113796
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
129113796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
ArfGap
PH
Zf_1st_IFT121
Motif
Other DBs
NCBI-GeneID:
129113796
NCBI-ProteinID:
XP_054482249
LinkDB
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Position
24:147301..167843
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AA seq
1183 aa
AA seq
DB search
MDLRLWGSLIGPCLWSMWEAPPGLGHMITVCSPPDDSSPPSPLPVPKPRSRYMRDSLSSA
SSLDRDVIGENLQTVFSNGAHLSTGEGAPPLPSLGGSDRGAVFPTLAGVTDMIASSIPSL
AGFAASIGGQAPSSPTPSAPPSIDSVANSIASHIPSLAGTASAVANPAAALNSASNSAPV
PAANTVSLESIISSLANIPSLAVIVSSVANPAVSSMSTSAHPLTXPRGGASHTDVGALSQ
LVMSALDQNTGFSLPPLEGAAEPAEDVCKRSPHTIKEESPYVTMLACWASQDEADTDSSN
EEEDTGASPAPSGAEGPMEGDPASNPSSNTKDRPSNPSGRLVPSRPAPPPPHPQGQSGKP
LKQKIPRAATIRVSRKKGGSGTSTTQNAVVRTSWLDVWKGFRHNVLWATLDGQLMSLWKK
RSNRFSEVLFHVSSITNVKKQDKGRFSVYFKKKHYDFMAHNEEVQKGWVTSLLATRGQPS
PSPPELHGSITIKDPRSRAYAAIWGHDLWIYPNKESFQLGIASCSVPLNVATVKSTGKHS
FTLITPYRSFNLSVDSSKELSVWLDSLSSFIHSALSSSHVALRIWENPDNKVCGDCGSAN
PEWASVNLLLVICQACAGQHRALGSNLSKVRSLMMDKKIWTEPLIQLFVTHGNRLANQVW
APAVPAADQLSPGSSDEERSKFIQDKYSRGVYRRVHALTSSRSLMDQRLRQVVCGDDVEE
TMSLICSGAKVCQTDPQSPSPILLAERAGQALQTELLRLNEYTDVPPFLSQRPDSAPSGR
IHTLIVRREEEELHGKLEEDRFLFSLENDSAACDVLDLREVLSVFLRDGAAHQFEMVTLS
NQLICAADTEEALVNHLVHILKVILPGGVSYAEVGGASAVSRVRVVKVGGASSHCDAWLL
LLEDGVSLHPVQRQTQQTLRMDLDELSNHEMDPSENIITMATADRSVSLRFEEQHSCRSW
FSQLQRALTNQRAAPRRPPAANQSAAALPLYPVVDVFSRGSVPPAVERCISHITSFGLKV
EGVYRRCGLASKVTQLVEALMTSPNSAPLESDEQGVLDAGSALKQYVRQHEGLIPDTDRQ
QWIHAAMVADERSRFSSYRRLLRQLPDDNRATLNALFGHFYMVQLFSQVNRMSAQNLALV
LVPTLFQTLNQDLLRLTREFIIHHTLLFLTPEREEEEEQITVF
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagactgtgggggtccctgattggtccgtgtctctggtccatgtgggaagct
cctcctggtttaggtcacatgatcactgtctgttctcctccagatgactcctcccctccg
tctccacttcctgtcccgaagcctcgctctcgttacatgagagacagtctgagctccgcc
tcctctttggacagagatgtgatcggtgaaaatctacaaacagttttctctaatggggct
cacctgagcacaggtgaaggagctcctcctcttccttctctcggtgggtcggaccgcgga
gctgtcttcccgactttggccggcgttactgacatgatcgccagcagcatcccctcattg
gctggatttgccgcctccattggaggccaggcccccagttcccccactccctcagcccct
ccctccatagacagcgtggctaacagcatcgccagccacatacctagcttagcaggaact
gctagcgctgtggctaaccctgctgctgcgttaaactccgcctccaacagcgcacctgta
cctgctgctaacactgttagcttagaaagcatcattagctcattagctaacatacccagt
ttagcggtaattgttagcagtgtggctaatcctgctgtcagctccatgagcacatcagcc
caccccctcactnngccgaggggcggagcctcccacacagatgttggagcgttgtcacag
ctggtgatgtcagcgctggaccagaacacaggattctcattacctccactagagggagca
gccgagccggcagaggacgtctgtaaacgttctcctcacaccatcaaagaagaaagcccg
tacgtcaccatgttggcgtgttgggcgagccaagacgaagctgacaccgactcatccaat
gaggaggaggataccggagctagccccgccccctctggagctgaaggaccaatggaagga
gatcctgcttctaacccgtcctctaataccaaagaccgcccgtccaacccttcagggcgt
ctggtccccagcaggccggccccgccccctccgcatcctcagggccaatcagggaagcct
ctgaaacagaagattcccagagcggcaacaatccgagtgtcccggaagaaaggaggaagt
ggaacctcaacgacacagaacgccgtggtgagaaccagctggctggacgtctggaaggga
ttcagacataatgttttatgggcgacgttggacggtcagctgatgtctctgtggaaaaaa
cgctcaaaccggttcagtgaggtcctctttcacgtctccagcatcaccaacgtgaagaaa
caggacaaaggaagattctctgtttacttcaagaagaagcactatgacttcatggctcat
aatgaggaggttcagaaaggttgggtcacgtctctgctagcaacccgaggccagccaagc
ccctcccccccagagctccacggatcaatcaccatcaaggacccgcggagccgggcctac
gccgccatctggggtcacgacctctggatttaccccaacaaggagagcttccagctgggc
atcgcctcctgctccgtccccctgaacgtggccacggtgaaatctacagggaaacactct
tttaccctcatcactccatacaggagcttcaatctgtctgttgattcgtcgaaggagctc
tccgtgtggttggacagcctgtcctccttcattcacagcgctctgtccagcagccatgtg
gcgctgcgtatctgggaaaaccccgacaacaaagtgtgcggtgactgcggctcggccaat
cctgagtgggcgtcggtcaacctgctgctggtcatctgtcaggcctgtgcaggtcagcat
cgagctctgggaagcaacctgtcgaaggtacgcagcctgatgatggacaagaagatctgg
actgaaccactcatacagctgtttgttacccacggtaaccggctggccaaccaggtgtgg
gctccggcagtgccggcggcggatcagttgagtccggggtcgtctgacgaagagaggtca
aagttcatccaggataaatacagcaggggcgtctacagacgagtccacgctctgacctcc
tcacgctctctgatggatcagaggctgcgtcaggtggtttgtggagacgacgtagaagaa
acgatgtctctgatctgttcaggagcaaaggtgtgtcagacggaccctcagagcccctcc
cccatcctgctggctgagagggccggtcaggctctgcagaccgagctgctccgcctcaac
gagtacacagatgtcccacctttcctgtcccagagacctgactccgccccctcaggtagg
atacatacactaatagtgaggagagaagaggaggagcttcacggtaaactagaggaagat
cgtttcctgttctcgttagaaaacgactctgcagcgtgtgacgttctcgacctgagagaa
gttctgtctgtgttcctcagagacggagcagctcatcagtttgagatggtgactctgagc
aatcagctgatctgtgctgccgacactgaggaggctctggtgaatcacctggtccacatt
ctgaaggtgattctcccagggggcgtgtcttacgcagaggtgggaggagcttctgccgtc
agtagagtgcgtgtagttaaagtgggcggtgcctcgagtcactgtgatgcctggttgttg
ctgttggaggacggagtcagtcttcatcccgtccagagacaaacacagcagactctgagg
atggatcttgacgagctcagtaaccatgaaatggatccatctgaaaacatcatcaccatg
gcgacggcagacaggagcgtgtcgttgcgtttcgaggaacagcacagctgtcgctcctgg
ttcagccagctgcagagagctctgaccaatcagagagcagctccgcggcgtcctccggca
gccaatcagagcgcggcggctctgcccctgtacccggtggtggacgtgttctccaggggc
tcggtcccgccggccgtggaacgctgcatctcccacatcaccagcttcggtctgaaggtg
gagggcgtgtaccgccgctgtggcctcgcctccaaagtcacccagctggtggaggctctg
atgacatcacctaactccgcccctctggagagtgacgagcagggagttctggacgccggc
tccgccctcaaacaatatgtccgccagcacgagggtttgatccccgacacagacagacag
cagtggatccacgctgcaatggttgcagacgaacgctccaggttttcatcttaccgacgg
ttgctacggcaactgcctgacgacaaccgagcaacactgaacgcactgtttggacacttc
tacatggtccagctgttctctcaggtcaacaggatgtcggctcagaacctggctctggtt
ctggtcccgactctgtttcagactctgaaccaggatctgctccgactcaccagagagttc
atcatccaccacacgctgctgttcctgacacctgagagagaggaggaggaagaacagatc
actgtgttctga
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