KEGG   Anoplopoma fimbria (sablefish): 129113818
Entry
129113818         CDS       T09102                                 
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129113818 (zc3h12b)
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     129113818 (zc3h12b)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4 UBA_N4BP1_C
Other DBs
NCBI-GeneID: 129113818
NCBI-ProteinID: XP_054482270
LinkDB
Position
24:17219870..17227894
AA seq 845 aa
MTVWSMVEKLKMEKRPCREENIDSSEAQHASDDSEDGSSSESEPEEQQHQRVRVTSRCKK
REPLAVAKPHRQLCRSPCLDRPSFSQGSTAQELREDDTGAGPGIKPASDREYQTKMEFAL
KLGYSGDQVETVLNKLGAAALINDILAELVRLGNKVEPDIQACSSTATLISRPPCVKETV
SPEVSVEDDSVDTYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKGHKDITVF
VPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLSYDSDG
IIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVV
PEHKKQPCPYGKKCTYGHKCKYYHPERVNQPLRSVADELRAFAKLSAVKTMSEGALAKCG
TGPATVKGDGNSEVKRVAPKRQSDPSIRSVACEPPEALSVARKSEANSVPSLVSALSVPT
MQPAKSHAAGALNTRSASSPVPGSLQFAHSSLEHMSSVQYPPILVTNSHGASITYGEQFP
KYDSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHGVYQRNPSHCHESCLSHSNSDS
FSSYGDMYPSSVDSSLEESMKGQQQSPAQGRMQAFSHGFRHEALSRVQSYGPEEPKQGPR
KQPGSHLAPHIQHVPVGARSSCPGDYPLTQNVLPPLSSQPSRSLGMTRMDSISDSRLYDS
NPMRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKMEQIWN
SPWEMPSAAEHSERYVIPDHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQLAAVIVTK
LRSCH
NT seq 2538 nt   +upstreamnt  +downstreamnt
atgacagtatggtcgatggtggagaagctcaaaatggaaaaacgcccatgcagggaggag
aacattgactcaagcgaggcccagcatgccagtgatgattccgaggacgggagcagctca
gaaagcgaaccagaagagcagcagcaccagagggttcgggtgaccagcaggtgtaagaag
agggagcccttggccgtcgcgaaaccccaccgacagctctgtcgctctccatgcctcgac
cggcccagtttttcccagggtagcactgcgcaagaacttcgcgaggatgacaccggcgcc
ggaccagggatcaagcctgccagcgacagagagtaccagactaagatggagttcgcattg
aagttgggctattcgggagaccaggtggagacggtgctcaacaagctgggggcggctgca
cttattaacgacattctcgctgagctagtgaggctcgggaacaaagtagagcctgacatc
caagcttgcagcagtacagcaacgttaatatcacggcccccctgtgttaaagagactgtt
agcccagaggtgtcggtggaagacgactctgtggatacgtacgataacctcaggcccatc
gtcatcgatggctcaaatgtggcaatgagccatggaaacaaggaggtgttctcttgtcgt
gggatccagcttgctgttgaatggttcttggagaaaggacacaaggacatcactgtgttt
gtccccgcctggaggaaggaacagtcgaggcctgatgccctcatcacagatcaagaaata
ttacgcaagctggaaaaagagaagatcctggtcttcactccatcccggagagtccagggc
aggagagtggtgtgctacgacgatcgcttcatagtgaagctgtcttatgattctgatgga
attattgtgtcaaacgacaactacagggacttgcaaaatgagaagccagagtggaagaag
ttcatagaagagcgtctcttaatgtactcgtttgtcaatgacaagtttatgccacctgat
gatcccttgggaagacatggtccaagcttagaaaatttcctccgcaagcgtcctgtcgtt
ccagagcacaaaaagcaaccttgcccctatgggaaaaagtgcacatacggacacaagtgc
aagtactatcatccagagcgcgtcaaccagccactgcggtcggtggctgatgaactacgg
gcttttgccaaattgtctgcagtgaagacgatgagtgagggggcattagctaaatgcggt
accggtcccgcaactgtaaagggggacggcaactctgaggtcaagcgcgtggcgcccaag
cgtcaatccgaccccagtattcgctcagtggcctgtgaacctcctgaggcactttccgtc
gcgaggaagtccgaggcaaattcagtgccttcccttgtgtccgctctcagcgtgcccacc
atgcagcccgccaagagtcacgcagccggggccttgaacacacgatcagccagcagcccg
gtgccaggttctttgcagttcgcacacagctctctggagcacatgtccagtgtacagtac
cctcctattttagttaccaacagtcatggcgcctctattacatacggcgaacagttccca
aagtatgactcggttagcgaccatgggtattattcgctgcacagtgatttttcaaacatg
agcatgagcagcatgcacaacgtcgacagtttctgtagcatggagcacgagcatggtgtg
taccagagaaatcccagccactgccatgagtcctgcctcagccattcaaacagtgactcc
ttctcctcgtatggggacatgtacccgagctccgtggacagcagcttagaggagagcatg
aaggggcagcagcagtctcctgcgcagggtaggatgcaagctttctcccatgggtttcgc
catgaagcactgtccagggtacagagttatggccccgaggaacccaagcagggcccccgc
aagcagcccggatctcatctggcaccacacatccagcatgttccagtgggggccaggtcc
agctgtcccggcgactatcccctcactcagaatgtcctcccacctttgtcctcacagccc
tcacggtctctcggcatgactcgcatggacagcatatccgattcgaggctatacgacagc
aacccgatgagacagaggagaccccccctgtgccgggagcagcatgcgagctgggaccct
ctgccttgcggtaatgagtcctacggataccattcatatcctttgagcaacagcctgatg
ccgtgttgcgagcgagtgatggtccgcagcatgccagacaaaatggaacaaatctggaac
tcgccatgggagatgccatctgcagctgaacactcagagcggtatgtcatcccagaccac
cagtatcaaacatatcggaacctttgtaacatctttcctgcttacgtagtccactcagta
atggagaagaaccctcatttgacagatccacagcagcttgccgccgtcattgttacaaaa
ctgaggtcatgccattga

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