Anoplopoma fimbria (sablefish): 129113818
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Entry
129113818 CDS
T09102
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129113818 (zc3h12b)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
129113818 (zc3h12b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
129113818
NCBI-ProteinID:
XP_054482270
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Position
24:17219870..17227894
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AA seq
845 aa
AA seq
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MTVWSMVEKLKMEKRPCREENIDSSEAQHASDDSEDGSSSESEPEEQQHQRVRVTSRCKK
REPLAVAKPHRQLCRSPCLDRPSFSQGSTAQELREDDTGAGPGIKPASDREYQTKMEFAL
KLGYSGDQVETVLNKLGAAALINDILAELVRLGNKVEPDIQACSSTATLISRPPCVKETV
SPEVSVEDDSVDTYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKGHKDITVF
VPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLSYDSDG
IIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVV
PEHKKQPCPYGKKCTYGHKCKYYHPERVNQPLRSVADELRAFAKLSAVKTMSEGALAKCG
TGPATVKGDGNSEVKRVAPKRQSDPSIRSVACEPPEALSVARKSEANSVPSLVSALSVPT
MQPAKSHAAGALNTRSASSPVPGSLQFAHSSLEHMSSVQYPPILVTNSHGASITYGEQFP
KYDSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHGVYQRNPSHCHESCLSHSNSDS
FSSYGDMYPSSVDSSLEESMKGQQQSPAQGRMQAFSHGFRHEALSRVQSYGPEEPKQGPR
KQPGSHLAPHIQHVPVGARSSCPGDYPLTQNVLPPLSSQPSRSLGMTRMDSISDSRLYDS
NPMRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKMEQIWN
SPWEMPSAAEHSERYVIPDHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQLAAVIVTK
LRSCH
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgacagtatggtcgatggtggagaagctcaaaatggaaaaacgcccatgcagggaggag
aacattgactcaagcgaggcccagcatgccagtgatgattccgaggacgggagcagctca
gaaagcgaaccagaagagcagcagcaccagagggttcgggtgaccagcaggtgtaagaag
agggagcccttggccgtcgcgaaaccccaccgacagctctgtcgctctccatgcctcgac
cggcccagtttttcccagggtagcactgcgcaagaacttcgcgaggatgacaccggcgcc
ggaccagggatcaagcctgccagcgacagagagtaccagactaagatggagttcgcattg
aagttgggctattcgggagaccaggtggagacggtgctcaacaagctgggggcggctgca
cttattaacgacattctcgctgagctagtgaggctcgggaacaaagtagagcctgacatc
caagcttgcagcagtacagcaacgttaatatcacggcccccctgtgttaaagagactgtt
agcccagaggtgtcggtggaagacgactctgtggatacgtacgataacctcaggcccatc
gtcatcgatggctcaaatgtggcaatgagccatggaaacaaggaggtgttctcttgtcgt
gggatccagcttgctgttgaatggttcttggagaaaggacacaaggacatcactgtgttt
gtccccgcctggaggaaggaacagtcgaggcctgatgccctcatcacagatcaagaaata
ttacgcaagctggaaaaagagaagatcctggtcttcactccatcccggagagtccagggc
aggagagtggtgtgctacgacgatcgcttcatagtgaagctgtcttatgattctgatgga
attattgtgtcaaacgacaactacagggacttgcaaaatgagaagccagagtggaagaag
ttcatagaagagcgtctcttaatgtactcgtttgtcaatgacaagtttatgccacctgat
gatcccttgggaagacatggtccaagcttagaaaatttcctccgcaagcgtcctgtcgtt
ccagagcacaaaaagcaaccttgcccctatgggaaaaagtgcacatacggacacaagtgc
aagtactatcatccagagcgcgtcaaccagccactgcggtcggtggctgatgaactacgg
gcttttgccaaattgtctgcagtgaagacgatgagtgagggggcattagctaaatgcggt
accggtcccgcaactgtaaagggggacggcaactctgaggtcaagcgcgtggcgcccaag
cgtcaatccgaccccagtattcgctcagtggcctgtgaacctcctgaggcactttccgtc
gcgaggaagtccgaggcaaattcagtgccttcccttgtgtccgctctcagcgtgcccacc
atgcagcccgccaagagtcacgcagccggggccttgaacacacgatcagccagcagcccg
gtgccaggttctttgcagttcgcacacagctctctggagcacatgtccagtgtacagtac
cctcctattttagttaccaacagtcatggcgcctctattacatacggcgaacagttccca
aagtatgactcggttagcgaccatgggtattattcgctgcacagtgatttttcaaacatg
agcatgagcagcatgcacaacgtcgacagtttctgtagcatggagcacgagcatggtgtg
taccagagaaatcccagccactgccatgagtcctgcctcagccattcaaacagtgactcc
ttctcctcgtatggggacatgtacccgagctccgtggacagcagcttagaggagagcatg
aaggggcagcagcagtctcctgcgcagggtaggatgcaagctttctcccatgggtttcgc
catgaagcactgtccagggtacagagttatggccccgaggaacccaagcagggcccccgc
aagcagcccggatctcatctggcaccacacatccagcatgttccagtgggggccaggtcc
agctgtcccggcgactatcccctcactcagaatgtcctcccacctttgtcctcacagccc
tcacggtctctcggcatgactcgcatggacagcatatccgattcgaggctatacgacagc
aacccgatgagacagaggagaccccccctgtgccgggagcagcatgcgagctgggaccct
ctgccttgcggtaatgagtcctacggataccattcatatcctttgagcaacagcctgatg
ccgtgttgcgagcgagtgatggtccgcagcatgccagacaaaatggaacaaatctggaac
tcgccatgggagatgccatctgcagctgaacactcagagcggtatgtcatcccagaccac
cagtatcaaacatatcggaacctttgtaacatctttcctgcttacgtagtccactcagta
atggagaagaaccctcatttgacagatccacagcagcttgccgccgtcattgttacaaaa
ctgaggtcatgccattga
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