Anoplopoma fimbria (sablefish): 129113843
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Entry
129113843 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: remodeling and spacing factor 1-like
KO
K11657
remodeling and spacing factor 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129113843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129113843
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
129113843
BRITE hierarchy
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GFIT
Motif
Pfam:
PHD
WHIM1
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
129113843
NCBI-ProteinID:
XP_054482294
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Position
24:2974247..2992772
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AA seq
1952 aa
AA seq
DB search
MAASAATASSPPGLCPNYAVICSFLERYGVLLDLPELTFPQLERYLQETSSVPKLLVDLH
VKLLRKIGKSVSADRWEKYLLKICQEFNTTWAWELEQNGYKELSMECKTGILKYLCECQF
DDNVKFKTAINDEDPDKMRLQPIGRDKDGQMYWFQLDQDDNVRVYLEEQDDLDGSSWKCI
VKDRNDLAEVVALLKTQIDPELLKRDLENKPEGEVKKIEDTSDEDSKDSTKASAPVSPKT
ENNEKETQKDDLKSETSDTKLSLNGVIEGKSEAELNSGKSAEDLDISAKAQSIKEEPMDV
SDSKTSTVTSEPVSETPCLSVKAEELKKSSAEEIQQALKNDQQAKIPLKKRGMKFSEDFE
KNSGIIVQNPSVSQVKEAPKADSTPEQNKKAPSVNVNGEVQPSSEKGLLSHSSLKDAAVD
KEKTTEPAANKSVERTEKDSSFTDKEEAKGKKDDACSAEKLTVGVASNKEDSGKKKLDVA
VEKESTAAKETSESPKETPASPKDVNNAAEKTSHHEEQEKMTGSKPEATKETSTVDKTLK
RTGGSEKVTSKDVESKDSEQKPASVDESESSKTEKTRTSENVTAVIQTNMSEAKETASRE
KSTPKEKPGVIKTTEGKDKDAAKKSADSSSVIKKTQVLKDSEDTVQKVLKKTDKPAVSEK
SEGKLKAEKIVESSVIKKLDESCKPVEKTAETNAEKAEKRKETEDFKKKVNCEDGTIQDA
SKISSAAAGPVEEEAVAVKHDLTKPQEADKAEVNSVERQTTEEASVGKDKQSRDVKKTNV
SESDKRTERTDKEQEAKDKEAERPSTESKRDADKEKKEDTDIDKEIDTDIEKKKDTDKGT
AIGKKKETYIEKKDTDKEKRKDTNKEKRKDTNKDTDIDKKKDTVIEKKQDTDKDQKKDTD
QEKRKDTDKEQKKDTDQEKRKDTDKEQKKDTHKDTEVEKKKDTDKKKKDTDIDNKKDTDI
DNKKDTGHKQGTEKGHRQGTEKDTDKEQKKDTDKEQKKDTDKEQKKDTDKEQKKDTDKEQ
KKDTDKDIDVEMKKGTDKVAEVEKNKNTDKKKDTDKEKKKDTEVEKKKDTNKEQKKDTNK
DTEVEKKKDTDKEKKKDTDKAKQKNDSEKHLCQDKENQKDSTTDKLSKTDETKENKLVNK
ESETSTESDKSAPQIVSKELDGKSSTETEKDVRPSKEPETEKPADEESKSKSEEEDSAAK
KEVANGGETRTSCRKIKPRGHRRKLELLREERQADSESDTNTGRSLRRSPRISRPTVKAV
EIHDKKVEKSQTTPSGEKNEDDKGEKEKDEEEEEEEEEVNAVQRKPREKKVDQEGQPKPK
GRKRRRVRWSNTRTRRKKKGSEDEEDNSEEESSYEEEESEDDSDEDYKIERSRKRRNRNR
ERRSSDSSTSTDDDLPPNDDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGE
WFCPPCQHKLLCEKLEEQLTNLDAALKKKQRAERRKERLIYVGISLENIITPSGEVEEEK
PEIIIKEKKETKRSKSWGRRSTRNKKSISYRFDEFDEAIEEAIEEDIKEAEGGGAGRGKD
MANITGHRGKDMSVILQADEGKENGRPPRPSAGQRRKKRRRLNDLDSDSTVDEEESEEEF
RISESSEEEFVVSENDSEGESESNNSDFGNSSSKRRNSSRRRKPLKSRRSSRKRRRPKGY
SDDEEEETDEDDEDEIVTEGSSEYSDSDLDMSRRRSRRSQKKKVNYRETSESEGSQAETN
QAKMKPRGRQDSSESEASFSKGSEEESRDRRVKRRADSSEEDSRQRHRRLALKRRRASED
DDSDDDSDESSEEDRPIRKRVNRIDSDDSEEEEGEEKEAEKEAAEKEAAAVKQEEKTKEK
KEDEKEDEESKGTNVVDSTPAEKPPTNGQSQIKSLEALTTHPEPPKNITATPAVAIAPNG
QVGQEVAAPEEDEDDLLGVTDLVDYVCNNEDL
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcggcggcaacggcgagttctcccccaggtttgtgtccaaattacgccgtg
atttgctccttcctggagcgctacggcgtgctgctggacctgccggagctcaccttcccc
cagctggagcgatacctgcaggaaacatcctcagttccaaagctgctggtcgatctacac
gtcaagttgctgaggaagatcggcaagtcagtgtcagcagatcgatgggagaaatatcta
ctgaagatatgtcaagaattcaacacgacgtgggcgtgggaactagaacagaatggatac
aaggagctgtccatggagtgcaagacgggaatacttaaatatttgtgtgagtgtcagttt
gacgataatgtcaagttcaaaacggccatcaatgatgaagacccggacaagatgcgtctg
cagccgatcggccgggacaaagacggtcagatgtactggttccaactggaccaggacgac
aatgtgcgcgtttatctggaggagcaggacgacttggacgggtcgtcgtggaaatgcatc
gtcaaagatagaaatgacctggccgaggtcgtggctctgctgaagacacaaatcgacccg
gagctgttaaaaagagatctagaaaacaaacctgagggtgaagttaaaaagattgaggac
acatcagatgaagacagcaaagactccaccaaggcttctgctccagtctcaccaaagacg
gagaataatgaaaaagaaacacagaaagacgacttaaaatctgaaacttctgacaccaag
ttgtctctgaacggcgtcattgagggtaaaagcgaagcagagctcaattcaggaaaatct
gcggaggatctggatatcagtgcgaaagcccagagcatcaaagaagagccgatggacgtg
tcggactctaaaacgagcacagtaacaagtgaacccgtctctgagacgccgtgtttatca
gtgaaggcagaagagttaaagaagagcagtgcggaggagattcaacaagctctgaagaac
gaccaacaggccaaaatccctttgaaaaaacggggaatgaagtttagtgaagactttgaa
aagaatagtggcatcatagtgcaaaacccgtccgtttctcaggtcaaggaagctcctaaa
gcggactcgactcccgaacagaacaagaaagctccgagtgtaaatgttaacggagaagtt
cagccttcatcagagaaaggcctcctgagtcattcgtcgctaaaagacgccgccgtcgac
aaagagaagacgactgaaccggctgcaaataaatctgtagaaaggacagaaaaggactct
tcgttcacagataaggaggaagcgaagggtaaaaaggatgacgcttgcagtgcagagaag
ctcacagtcggagtcgcatcgaacaaagaagactcgggcaagaaaaagctagatgtggcg
gtagaaaaggaaagtactgcagcaaaagaaacttcagagtctccaaaagaaacgccggct
tcaccgaaagacgtaaataatgcagcagagaagacgtctcatcatgaagagcaagaaaaa
atgacaggatccaaaccagaagccacaaaagagacaagtacagtagacaagacattaaag
agaactgggggatcagagaaagtcacatccaaagacgttgaatcaaaagattcagagcaa
aaaccagccagtgttgacgaatcagagtcgagtaagactgaaaaaaccaggacgtcagaa
aacgtaacagctgtgattcaaacaaacatgagtgaagctaaagaaacagcgtcacgtgag
aaatcaacgcctaaagaaaagccaggagtcatcaaaacaacggagggcaaagacaaagat
gctgcaaagaaatctgctgactcatcatctgtcattaaaaagactcaagtattaaaagac
agtgaggatacggtccaaaaggtccttaaaaagacagacaaaccagcagtcagtgagaaa
tcagaaggaaaattaaaggctgaaaagatcgttgagtcttctgtgattaagaagttggat
gaatcatgtaaacctgtggagaagactgcagagacgaacgctgaaaaggcggagaagaga
aaagagactgaagattttaagaagaaggtcaactgtgaggacggtacgatacaagatgct
tccaagatcagcagcgctgcagccgggcctgtggaggaagaagcagtggccgttaaacac
gatctgacaaaaccacaagaagctgacaaagctgaggttaactcggttgaacgtcagacg
acagaggaagcttctgtagggaaagataaacagtccagagatgtcaagaagacaaacgtc
tctgaaagtgataaaaggactgaaagaacagacaaagaacaggaagctaaagacaaggag
gcagagcgtccgtcaacagagagtaaaagggacgcagacaaggaaaagaaagaggacaca
gacattgataaggaaattgacacagacattgaaaagaagaaggacacagacaagggcaca
gctattggaaagaagaaggaaacatacattgagaagaaggacacagacaaggaaaagaga
aaagacacaaacaaggaaaagagaaaagacacaaacaaggacacagacattgacaagaaa
aaggacacagtaattgaaaagaagcaagacacagacaaggatcagaaaaaggacacagac
caggaaaagagaaaagacacagacaaggaacagaaaaaggacacagaccaggaaaagaga
aaagacacagacaaggaacagaaaaaggacacacacaaagacacagaagttgaaaagaaa
aaggacacagacaagaaaaaaaaggacacagacattgacaataaaaaggacacagacatt
gacaataaaaaggacacaggacacaaacaaggaacagaaaaaggacacagacaaggaaca
gaaaaggacacagacaaggaacagaaaaaggacacagacaaggaacagaaaaaggacaca
gacaaggaacagaaaaaggacacagacaaggaacagaaaaaggacacagacaaggaacag
aaaaaggacacagacaaggacatagacgttgaaatgaaaaaaggcacagacaaggtcgca
gaagttgaaaagaataagaacacagacaagaaaaaggacacagacaaggaaaagaaaaag
gacacagaagttgaaaagaaaaaggacacaaacaaggaacagaaaaaggacacaaacaag
gacacagaagttgaaaagaaaaaggacacagacaaggaaaagaaaaaggacacagacaag
gcaaaacaaaaaaatgacagtgagaaacatctttgtcaagacaaagaaaatcaaaaggat
tccacgacagataaactctcaaaaacagatgaaacaaaagagaataaactcgttaataaa
gaaagtgaaacctcgactgaatcggataaatctgctcctcaaatcgtgagcaaagaactc
gacggcaaatcctcaactgaaacggagaaagacgtccggccgagcaaagaaccggaaact
gaaaagcctgctgacgaggaaagtaaaagcaaaagtgaagaagaggactctgcagcaaag
aaagaggtggcgaacggcggggaaactcggacttcctgtcggaaaatcaaacccagaggc
cacagaaggaaactggaacttctgagagaggagagacaagcggattcagagtccgacacg
aacacggggaggtctctccggaggtcgccgaggatctccagaccgacggtgaaggccgta
gagatccacgacaagaaggtagagaaatcacaaaccactccgtcaggtgagaagaacgaa
gacgacaagggcgagaaagaaaaagacgaggaagaagaggaggaggaggaggaggtgaac
gctgttcagaggaaaccaagggagaaaaaggttgatcaggagggtcagcccaaacccaag
gggaggaagagacggagggttcggtggtccaacacgcgaacgcgccgtaaaaagaaaggc
tccgaggatgaagaggacaacagcgaggaggagtccagctatgaggaggaggagagcgag
gacgacagcgacgaagactacaagatcgagagaagcaggaagagaaggaatcgaaaccga
gaaagacgaagctcggactcctcgacgtccacagacgacgacctacctcccaacgacgac
ccctgcaaacattgtggtcttccaaatcaccctgaactgatccttctgtgtgattcgtgt
gacagcgggtatcacaccgcctgtctgaggcctccgctcatgatcatccccgacggagaa
tggttctgtccaccatgtcaacataagctactctgcgagaaattagaagagcagctaacg
aacctcgacgcagctttgaagaagaagcaacgggccgagagaaggaaagagcgtctaatt
tacgttggaatcagtcttgaaaacatcatcacgccatcaggggaggtggaggaggaaaag
ccagagatcatcatcaaagagaagaaagaaacgaagcggagtaagagctggggacgaagg
tctacgaggaacaagaaatccatcagctacagatttgatgaattcgacgaggcgatcgag
gaggcgattgaggaagacatcaaagaagcagagggtggaggagcaggtcgcggtaaagac
atggccaacatcacaggtcacagaggaaaggacatgtccgtcatcctccaagcagacgag
ggcaaagagaacggccgcccgcctcgaccctccgccggccagcgcaggaaaaaacgccgg
cgactcaacgacctggacagcgacagcaccgtggacgaggaggagagtgaggaagagttt
cgcatcagtgaaagctcagaagaagagttcgtcgtgtccgagaacgactctgaaggcgag
tcggagtccaacaacagcgactttggcaacagcagcagcaagcggcgaaactcctcgcgg
cgcaggaagccgctgaaaagtcggcgaagctccagaaagcggcgaagaccgaaagggtac
tcggatgatgaggaggaggaaacggatgaggacgatgaagatgaaatagtgactgaaggc
tccagcgaatacagcgacagtgatctggacatgagtcgacggcggtctcggcggagtcag
aagaagaaggtgaactaccgcgagacgtccgagtccgaaggctctcaggcagaaaccaac
caggccaagatgaaacccagaggacgccaggacagctccgaaagcgaagcgagtttctcc
aaaggctccgaggaggagtcgagggatcggagggtgaagaggagagccgactcctcggag
gaggattcccggcagcggcaccgacgcctcgctctgaagcgcaggagagcctccgaggac
gacgactcggacgacgactctgacgaatcgtcggaggaggaccgaccaatccggaaacga
gtgaaccgcatcgactcggacgacagcgaggaggaggagggagaagagaaggaggcggag
aaggaggcggcggagaaggaggcggcggcggtgaaacaggaggagaaaacgaaggagaag
aaagaagatgaaaaagaagacgaggagtcaaagggaacaaacgtagtggactccactccg
gcggagaagccaccaaccaacggacagagccagataaagagcctcgaggccctcacaaca
catccagaaccgcccaaaaacatcaccgccacaccagctgttgccatagcgcccaacggt
caggtcggccaggaggtggcggcgccggaagaagacgaggacgacctgttaggagtcaca
gacctggtggattacgtctgcaataacgaagatttgtaa
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integrated database retrieval system
