Anoplopoma fimbria (sablefish): 129113919
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Entry
129113919 CDS
T09102
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129113919 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129113919 (chrne)
Ion channels [BR:
afb04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
129113919 (chrne)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
SLATT_5
Motif
Other DBs
NCBI-GeneID:
129113919
NCBI-ProteinID:
XP_054482377
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Position
24:complement(16364056..16371082)
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AA seq
543 aa
AA seq
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MSTNKVSGKAERRLCLVVRAAVLECVKLFCSTQMRFCNRKVTKVRSGSRMQCNEESKLIS
DLFTGYNKNIRPVVSPEDKLDIQIKLTLTNLISLNEKEETLTTNVWIEIQWTDYRLSWNE
SRYFGINIIRVPCKTVWLPDIVLENNIDGKFDVAYYANVLISSDGWMYWLPPAIYRSTCA
IEITYFPFDYQNCTLAFRSQTYSANEVDLILAVVESETIEWVDIDPEAFTENGEWAIVHR
PARKMINTRYSPDDLEYQEILFNLVIQRKPLFYVINIILPCSLISSLVVLAYFLPAQAGG
QKLTVSISVLLAQTVFLFLIAQKIPETSLSVPLIGKYLIFVMSVTTLIATNQIVVLNFSL
RSPSTHTMSNTIKHVFLEMVPRFLGMPPLVDDSEVTTEVNGVRERRRSSFGLMQRAEEYV
LKQPRSEMMFDKQRERHGLTRSIVDNMDVSSTANLYKSLAQAAPEIKQCVDACNFIAEST
RQQNNIGSEIESWVLIGKMIDKVCFWAAILLFIIGTVWIFLTGHFNRAPEFPFPGQSKKY
VPS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaacaaagtatcaggtaaggcagagcgtcgtctgtgtcttgtcgtgagagca
gccgtactggagtgtgtaaagctgttctgctcgacacagatgaggttctgcaacaggaag
gtaacaaaggtccgcagtggaagcagaatgcagtgtaatgaggagtccaagctgatcagc
gacttgttcacaggctacaacaagaatattcgcccagtggtttcacctgaagacaagttg
gatattcagatcaagctgaccctcactaacctcatctccctgaatgaaaaggaggaaacg
cttacgaccaatgtgtggattgagattcaatggactgattatcgcctctcctggaacgaa
tctcgctattttggcatcaatattattcgtgttccatgcaagactgtttggctccctgac
attgtcctggagaacaacattgatggcaagtttgatgtggcttactacgccaatgtgttg
atcagcagcgatggttggatgtactggctgcctcctgctatctatcgcagcacttgtgcc
attgaaatcacctacttcccatttgattatcaaaactgcacgctagcattcagatcccag
acgtacagtgccaatgaagtggacctcatcctggctgtggtagaatcagagactattgag
tgggtggacattgaccccgaggctttcacagaaaacggcgagtgggccatagtccatcgt
ccagccaggaagatgatcaacacacggtactccccagacgacctggagtatcaggagatc
ctgttcaatctggtcatccaaaggaagcccctcttctacgtcatcaacatcatcctgcca
tgctccctcatctcctcgttggtggtgctggcctacttcctacctgcacaagccggggga
caaaagttgactgtgtccatctccgtcttgctggctcagactgtcttcctctttcttatt
gcccagaagatccctgagacttctctctcggtccctctcatcggcaagtacctgatcttt
gtgatgtctgtcactactctcattgctaccaatcaaattgtggtgctgaacttctccctg
cgtagccccagcactcataccatgtcaaataccatcaaacatgtgttcctggaaatggta
cctcgcttcctgggcatgcctccactggtggatgacagtgaggtgacaaccgaggtgaac
ggagtgagggagcggcggcgcagctcctttggcctcatgcagagagcggaggaatatgtg
ctgaaacaacctcgcagtgaaatgatgtttgacaaacaaagagagagacatggtctcaca
cgatccatcgtggataatatggatgtcagtagcacagccaacctgtataagagtttggcc
caagctgcacccgagatcaagcaatgtgtggatgcctgcaacttcattgctgagagtacg
agacaacaaaataacattggatctgaaattgaaagctgggtactgattgggaagatgatc
gacaaggtgtgtttctgggccgccattcttctcttcatcattggcacagtgtggatcttc
ttaacaggacacttcaaccgggcacctgaatttccgtttccggggcaaagcaaaaaatat
gttccaagttaa
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