Anoplopoma fimbria (sablefish): 129113921
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Entry
129113921 CDS
T09102
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129113921
Ion channels [BR:
afb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129113921
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Ortholog
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Motif
Other DBs
NCBI-GeneID:
129113921
NCBI-ProteinID:
XP_054482381
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All DBs
Position
24:complement(16524977..16530492)
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AA seq
1001 aa
AA seq
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MENLTPEQWREIMSKKMRFPPELISAIQEEKIEMLSGLLRTGDGIVRQLDESEDRQWREA
LNLSIRLGNESCMDTLLQGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSQAIFDHSIDNSQFAPGVTPLTLACQKDLYDIVTMLTKKGHVIPWPHRISCDCLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSEDAMLRAFSLSRELRKLSQKEPEFKPQYL
GLEELCQEFAVELLGMCRNQSEVTTILNSCGDESQDSLEEQAFEEGIPNLSRLRLAVNFN
QKQFVAHPICQQVLSSIWCGNLAGWRGSRTTWKLLVSMGIFITMPILCFVYWIAPKSKVG
KILKIPVIKFLLHSASYLWFLITLLGESITMEVYRGRFASRQQNLLHSSFHMVWVVGFFW
FECKEVWIEGLQSYFRDLWNCLDMMVLSMYLASFALRLLIMLKGYFVCHDHNGTEECIYF
TQTERQDWHQEDPQLLSEVLFAVTSMLSFTRLAYILPAQESLGTLQISMGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPHLGRFNETFHFLFWTMFGVANQDYVDMPQFVLAEF
VGRIMYGIFTLIIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAVFYILRGIFRRICCCTFTSENKYPPLACENDGKGSEDNQLPYRQQVIRAL
VQRYIESARREFEETKRKDVGNRITLLTKAVSRMHGDIKLVQQVLMDDGHTANDALTKDG
SSFLGKYIIGAKNNFRGFNSRQDETNVSLKVTVHNGEEGDDKEKLDSDTKQESDTQQNEV
SECRAEGSEQVTDHDVVKMEEGRAKIELGDEKETDKKEQVEADRNEVKEEVAAGRSFNHV
EEKQKEAPQDEAEKRREGEILTVVEDCEKHTETTSQKVEAKGMKGKQFERDVADKSGLRE
SNVKPGAKTIIPSPTGSSSSKDTGFGSREGEGSIDGTLVRQ
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgcctgaacaatggcgcgagatcatgagcaagaagatgcggttccct
ccggagctcatcagtgccattcaggaggagaaaatagagatgctgtctggacttctgagg
accggcgacggcatcgtccgccagctagatgagtctgaggaccgccagtggagggaggcc
ctcaacctgtccatccgcctgggcaacgagagctgcatggacaccctcctgcagggggtc
aagtttgacttccggcagattcacgaggctctcctagtcgccgtggacaccaaccagccc
agagttgtgaagcgcctgctggaccgccttgaccaggagaaaggcaacaagatggatgtg
cgctcattctctcaggccatctttgaccactccattgacaactcccagtttgcccctggt
gtgactcctctgacgttggcctgccagaaagacctgtatgatatcgtgaccatgctcacc
aaaaaaggtcacgtcatcccgtggccgcataggatatcctgtgactgtctggagtgtcgt
aacggacgtcagtacgaccttttgaagttctccctgtctcgtatcaacacctaccgcggc
atcgccagccgcgcctacctgtccatcacctccgaagacgccatgctcagagctttcagt
ctcagcagagagctccgtaagctctcgcaaaaagagccggagtttaagcctcagtatctg
ggcctggaggagctttgtcaggagtttgccgttgagttgctgggcatgtgtcgcaaccag
agcgaggtgaccactatcctgaacagctgtggagacgaaagccaggactccttagaggag
caggccttcgaggagggaatccccaacctgtcacgtctgcggcttgctgtcaacttcaac
cagaagcagtttgtggcccacccaatctgccagcaggtgctgtcatctatctggtgtggg
aacctggcaggatggagaggcagccggacgacctggaagctgcttgtctccatggggatc
tttatcaccatgcccatcctctgcttcgtttactggatcgcacctaagtcaaaggtagga
aagatactcaagattcctgtgatcaagttcctcctccactccgcctcctatctgtggttt
ctcatcacgttactcggggagtcaataacaatggaggtgtatcgaggcagatttgcttcc
cggcaacagaacctcctgcacagttccttccacatggtgtgggtggtcggattcttctgg
ttcgagtgtaaggaagtgtggatcgaggggctgcagagctacttccgggacttgtggaac
tgtttggatatgatggtgctcagcatgtacctggcctcctttgcgttgcgtttgcttata
atgctcaaaggttactttgtttgccatgatcacaacggcacagaggagtgcatctacttc
actcagactgagcgccaggactggcatcaggaggacccccagctgctttcggaggtgctg
tttgcagtgaccagtatgttgagcttcacacggctggcgtacatcctgccagcacaggag
tctctgggaactctgcagatctccatggggaagatgattgatgacatgatgagatttatg
tttatattgatgatcattggcacagccttcctctgtggcatcaacaatgtctatgttcct
tatgtcatctctccacatcttggcaggtttaatgagacgttccacttcttattctggacc
atgttcggcgtggccaaccaggactacgtggacatgccacagtttgtgttggccgagttt
gtcggaaggattatgtacggcatcttcacgctcatcatcgtcatcgtactgctcaacatg
cttattgctatgatcaccaactcctttcagaaaattgaggatgatgcagatgttgagtgg
aaatttgccagatcgaagctgtacctcagttatttcagagagggcctcaccatgcctgtg
cccttcaacatcatcccctcaccaaaagctgttttttacatcttaaggggtatctttaga
cgaatctgctgctgcacttttacttctgagaacaaatatccccctttagcctgtgagaac
gatggtaagggatctgaagacaatcagttgccgtaccgccagcaggtgatcagagctcta
gtgcaacgctacattgaatcggcacgcagggaattcgaggagaccaagaggaaagatgtc
ggtaatcggatcactttgctgaccaaagcggtctccaggatgcacggtgatatcaaactg
gtccagcaggttttgatggatgatggacacactgctaatgatgcactgaccaaggatggc
tcctcctttctggggaaatacatcattggtgccaagaacaatttcagagggtttaacagc
agacaggacgagacaaatgtatcacttaaagtgacagtgcacaatggagaggaaggtgat
gataaagaaaagcttgactcagatacaaaacaagagtcagacacacaacagaatgaggtg
agcgaatgtagagcagagggatcagagcaggtaacggatcatgatgtggtgaaaatggag
gaaggcagagctaaaatagagctaggtgatgagaaggaaactgataaaaaagagcaggtg
gaagcagacagaaatgaagtgaaagaggaagtggcggcagggagaagttttaatcatgta
gaagaaaagcaaaaagaggccccacaggatgaggcagaaaaaagaagagagggagagata
ctcacggtggtggaggattgtgaaaaacacaccgagacgacctcccaaaaagtggaggca
aaagggatgaagggtaaacaatttgagcgtgatgtagcagataagtctggtttaagggag
agcaatgtaaaacctggagccaagacaattattccctcaccaacaggcagcagcagctcc
aaggacacgggcttcggttccagagaaggggaggggtcgattgacgggacgttagtgaga
cagtaa
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