Anoplopoma fimbria (sablefish): 129113941
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Entry
129113941 CDS
T09102
Symbol
gabra3
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
afb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129113941 (gabra3)
04082 Neuroactive ligand signaling
129113941 (gabra3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129113941 (gabra3)
Ion channels [BR:
afb04040
]
Ligand-gated channels
GABA-A
129113941 (gabra3)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
129113941
NCBI-ProteinID:
XP_054482402
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All DBs
Position
24:18976576..19018921
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AA seq
516 aa
AA seq
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MSLRCQPVPGTANWEKAQGPTQNMLQGLQPSWQGNSWASRRKRWRRLLGKDGRTLYSYSS
AMDIVAVVGHREPLPDDSRDNITIFTRILDRLLDGYDNRLRPGLGESVTEVRTNIYVTSF
GPVSDTDMEYTIDVFFRQSWRDERLKFDGPMQVLPLNNLLASKIWTPDTFFHNGKKSVAH
NMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDAHACPLKFGSYAYTNNEVIYL
WTQGDERSVAVAEDGSRLNQYDLLGHVIGKETISSSTGEYVVMTTYFHLKRKIGYFVIQT
YLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFM
AVCYAFVFSALIEFATVNYFTKRSWAWDGKKEGMEIREPFQANMARINDMRRESATLSKK
ANNTFNIVGTTYAINVAKDQGLTTISKSATAAAAKHQYLHKMDDPYTEAKKSYNRVSKVD
KISRIIFPVLFFIFNLGYWATYVNRKPAIMKANNLN
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcaggtgccagcctgtgccaggcacggccaactgggaaaaggcccaggggcca
acccagaacatgctgcagggactccagcccagctggcaggggaactcgtgggcatcccgc
aggaaacgctggaggaggttactggggaaagatgggcggactttgtacagctacagctcg
gcaatggatattgtggcagtagttggacacagagagccgttgcctgatgatagtagagac
aatatcaccattttcacccgaattctagacaggctgttggatggatatgacaacagacta
cgtcctgggctgggagagagtgtgacagaagtgaggacaaacatctatgtgacaagtttt
gggccggtgtcggatacagacatggagtacaccatcgacgtcttcttccgtcagagttgg
agggacgagaggctgaagtttgacgggcccatgcaagttctaccactcaacaacctcttg
gccagtaagatctggactcctgatacatttttccacaatggaaagaaatcggtggcccat
aacatgacgactcctaacaaactgctacgactagttgacaacggcacacttctctacacg
atgaggttgaccattcatgctgagtgccccatgcaccttgaggatttcccgatggatgca
cacgcctgtcctctgaaattcggaagttacgcttacaccaataacgaggtgatctacctg
tggacccaaggagatgaaagatctgttgccgtggcagaggatggctccaggctgaaccag
tatgacttactgggacatgttattggcaaagaaaccatcagttccagcacaggagaatat
gtagtgatgacaacatatttccatttgaaaaggaaaattggctattttgtgattcaaacc
tacctcccgtgcatcatgactgtcatactgtctcaggtctccttctggctaaacagagaa
tcggttcctgctcgcactgtatttggggtcaccactgtcctaaccatgaccaccctgagc
atcagtgctagaaactccctccctaaggtggcctatgccactgccatggactggttcatg
gctgtgtgctatgcctttgtcttctctgccttgattgagtttgccacagtcaactacttc
accaaacgcagctgggcatgggatgggaaaaaagagggcatggagataagggaaccgttt
caggctaacatggccaggattaacgatatgagaagagaatcggcgactttgtccaaaaag
gcaaacaacaccttcaacattgttggaaccacctacgccatcaacgtggctaaagaccaa
ggtttaacaaccatttccaagagtgccactgcagcggcggccaaacaccagtacctccat
aaaatggatgacccatacacggaggccaagaaatcctacaaccgtgtcagcaaagtggac
aagatctcgcgcatcattttcccagttctgttcttcatcttcaacttaggctactgggcc
acgtatgtcaacaggaagcccgctatcatgaaggcaaacaacttaaactga
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