Anoplopoma fimbria (sablefish): 129113981
Help
Entry
129113981 CDS
T09102
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129113981 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afb01009
]
129113981 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129113981 (ncor1)
Protein phosphatases and associated proteins [BR:
afb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129113981 (ncor1)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
129113981 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
NCOR1_N
Motif
Other DBs
NCBI-GeneID:
129113981
NCBI-ProteinID:
XP_054482450
LinkDB
All DBs
Position
24:25139916..25192880
Genome browser
AA seq
2531 aa
AA seq
DB search
MSSSSGYPPSQGSFSSEQSRYPQHSVQYTFSGSRHQQDFTVPDYRTHMQDPQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSISAQSEHDSLDTKRPRMETVVEGHITRTPTTAGGVLM
PITHTVQDSLRSTMEVKKESQFSVKMEHPSSGGSALHMGDDQDASPSKLSKEELIQSMDR
VDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPATPPPVEHKHRSIVQIIYDENRKKA
EEAHKVLEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKI
CQRYDQLMEAWEKKVERLENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDTEQRRVRFINMNGLMDDP
MKVYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVADCVLYYYLTKKNHNY
KTLVRRNYGRRRGRNQQISRPSQEEKVDDKTEEDKTEKSEKREDEEKKDEEEKDDKEDSR
DIGKDKDKCDGGEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAASVQAEEAPPTA
AESALPDPPQLPKTDQMQKSMKEPTKPQTPVASMDANKAGAGETGETSRWTEEEMEVAKK
GLVEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSQGDG
LATASPDDDDDDDNADDSEGGDNSSDTESAPSPSQSGDSKRADSAAVDAHCSDQDKGQAS
NGKALEPLYGGLCVKEEKSPESENGSQEEKARMASYAGSVHPKTEPQDMDMNTGEVQVKM
EPDIRERGEKGDHSERHRELHSDNDSSATCSADEDVEAEPERQRIFSMDKPTLLNPPGSV
LVSSPKQTQLNIQQMQQRAANIPPMVPGPFGPGGVPISGFAMLQHQIKAVHESAHQEEKQ
RQDQGDLERRPPFSTRSPTVIDRDGKPLPYMPYDMKLALDQEVHSGRPGSPYRLSPRELS
RASPQLDPNAPNASRYSVPPVLHPAANQLVQTMQDGVRVTFSRPSRPPNIPSPPPLIPTT
KPTDKPSFIHGGSISQGTPGTYLPSHAVYGPEGAKSTVGSISLGLPRQQDPNKPGGVVPS
IQDGRGNPAKMGEGLTMRGSITQGTPALPQSSIAADLLKGTITKLATEDLSSSDKARGEQ
MSKGHVIYEGKSGHILSYDAIKNPRENTRSPRTGHELKRTYDMMEGPMGRGHPGREGAPF
EGLISRALPREGPHGDPKERPLITGSIMQGTPRTAAETYEDAMKYGKQIKRESPPIRSFE
GGIGKGKPYEGVNTIKEMGRSIHEIPRQDQSGQEICKTPDLSDRRVMEGSMSQIHPLNQS
TIKHNVKSLITSPSKLPHSMPQLEAMERAKYEESKAVRHTSVVNSTTSVLRSTHQEAGKS
QLSPSMYEDPNARRTPVNYSTNPVSRGSPMLGRGPEGVMSSGKSAAHERKSAMTPTQRDN
VPAKSPVSGGDPHPVASHSPFDPHHRPVGPGEVYRPHLPPHLDPAMAMTLHRGLDPAFMF
PRQPSPTGYHNTYQLYTMENTRQTILNDYITSQQMQVIRPDMARGLSPREQPVTIPYPAG
ARGIIDLAQMPPTILLPHPGGTGTPTLERMAYLPGAQNPFPPRAFNPNSISPGHQAHLAA
AAAASAEREREHRDREHRDREHRDREHRDREQQEKEREKEREREHREREREREREMRERE
RERANEYIRGGGQEQPGRPGSRGYLHSPSPSLRTQDVVVQQRPSIFQGKSVITALMPHSA
AAAAAAAQSSSRYSTATDALAALVDAAASAPQMDVAKVKESKHERDDEMSSSAAARRAAS
ISEQQQQLQQQLQQQHQQQHQQQHQQQHQQQQHLQQQHQQQQQLQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEAERRSMQSPYGAMSLPGGKPHPAYSEGPG
VGVKDKGPQTSKSRIEEELRTRGKTTITAANFIDVIITRQIASDKDSRERGSQSSDSSSS
LSSSRYDNTGGGAIEVISPASSPIQPQQDKPEEGQQQAAVPCQPSPAGMRAYDMSRYRPS
GEPPQPSSQQPPSSQVESYSQVPKTHRVMTLADHISHIITQDFARNQDPPPVSSSSSATF
QSAVPHVSSSGRAKMPSRYSPENQVQLSHHQRPSSRVSPENAPDKPRARPGKSPERGGRQ
MENYEPISPPQSYQGMDKQEAIGPPPQRREADNSEIRNDSRSPGNVSYLPSFFTKLENTS
PMVKSKKQEIFRKLNSNSGLGDSDVGNAQPGTEIFNLPAVTSSSSINPRNHSFSDPASNL
GLEDIIRKALMGNLEERQEDHQGGLGAQCAMNNTSGQGSDARQEANPSPSMGKQKHGKAS
SRKSKSPNLGQAYAGGERPSSVSSVHSEGDYHRQAQAQPQWSWDDRPSSTGSMQFPYNPL
TMRILSSTPPTSIASPSIQSQQQQQQQQQQQQQQQQQQQPQPPPAGAPVAQQRVWQSLLS
EQYETLSDSDD
NT seq
7596 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagctcgggctacccccccagccaggggagcttcagcagcgagcagagccgg
taccctcaacattctgtccagtacaccttctccggctcgcgccaccaacaggatttcacc
gtcccagactatcggactcatatgcaagatccacagggtcggagaagaccgtctttactg
tctgaattccacccaggaactgaaaggcctccagagagacgccatggttacgaacagcag
tttcactccatctcagcccagtcggagcatgactccttggatactaaacgccctcgcatg
gagactgttgttgagggccacatcacccgcacacccaccaccgctgggggtgttctcatg
cccataacacacacagtacaggacagtctaagatccactatggaggtcaaaaaggagtct
cagttctctgtcaaaatggagcacccgtcatcaggaggatctgcactacacatgggcgat
gatcaggacgcttctccttccaaactatccaaagaggagctgatccagagcatggaccgc
gtggaccgagagattgcgaaagtggagcagcagattttcaagctgaagaaaaagcagcaa
caactggaggaggaagcagcaaagccagtggagccagaaaagccagcgacccctccccca
gtggagcacaagcatcgcagcatcgtccagatcatctacgatgagaacaggaaaaaagct
gaagaggcccataaagttctggaaggtcttggtcctaaggttgagctgcccctctacaat
cagccatcagacacaaaggtgtaccatgacaacatcaagaccaaccaagtcatgcgcaag
aagctgattttgttttttaagaggaggaaccacgctcggaaacaaagggaacagaagatc
tgccagcgctacgaccagctgatggaagcgtgggagaagaaggtggagcgactggagaac
aaccccagacgcaaagccaaggagagcagaacacgggagtactatgaaaggcagttccct
gagatccgcaagcagagagagcagcaggagcgcttccagagggtcggacaaagaggaacg
ggcctttctgcaaccattgctagaagcgaacatgagatctctgaaatcatagatggcctt
tctgagcaggagaacaacgagaaacagatgagacaactgtcagttattcctcccatgatg
tacgacacggagcagaggcgagtgaggttcatcaacatgaacggcctgatggatgaccca
atgaaggtttacaaagcccggcagttcatgaatgtttggaccgaacacgagaaggagatc
tttaaggagaagtttgtccaacaccccaagaactttggcctgattgcctcctatctggag
agaaagtgtgttgctgactgtgtcctttactactacttgaccaagaagaaccacaactac
aagacgctggtgaggcgaaactatggtagacggagaggaaggaaccagcaaatatcacgt
ccctcacaagaagaaaaggtagacgacaaaaccgaagaggacaaaactgagaaatctgag
aaaagagaggacgaggaaaagaaggacgaggaagagaaagatgataaggaggactctagg
gacattggcaaggacaaagacaagtgtgacggtggggaggacgaggacggaaaggagcaa
aacacgccgcgtggcaggaagactgccaacagccagggccgccgtaagggaaggatcacc
acacgctccatggccaatgaggctgcatctgtgcaggccgaggaggctcctcccactgcc
gctgagtctgccttgccagatcctccgcagctccctaagactgatcaaatgcaaaagtcc
atgaaggagcctacaaaaccccagactccagtggcttccatggatgctaataaagctggt
gctggtgaaaccggagaaacttctcgctggaccgaggaggagatggaggtggccaagaaa
gggctagttgagcacgggcgaaactggacagccattgccaaaatggtgggcaccaaaagc
gaggcacagtgcaagaatttctatttcaattacaagagacgtcacaacctggacaacctg
ctccagcagcataagcaggacacacggcgggctcgtgctgataggtctcaaggtgacggt
ctagccacggcgtcacctgatgatgacgacgatgatgacaacgcagatgacagtgaaggt
ggtgacaacagctctgatacagagagtgctccctccccctctcagtctggcgactccaag
agggcagacagtgctgccgtagatgctcattgctctgatcaggacaaaggtcaggccagt
aatggaaaggccctggagcccttatacggaggactctgtgtcaaggaagagaaaagcccg
gagagtgagaatggatctcaggaggaaaaagccaggatggcttcctatgcaggctcggtg
catcccaaaactgaacctcaggacatggacatgaataccggggaggttcaggtcaaaatg
gagcctgacatcagggagagaggagaaaagggagatcacagcgagaggcacagggaactc
cactcagataatgactccagcgccacctgcagtgctgacgaggatgtcgaagcagagcct
gaaaggcagagaatattctccatggacaagcctacattgctcaaccctccaggctctgtg
ctggtgtcctcccccaagcaaacccaactcaacatccagcagatgcagcagcgtgctgct
aacatcccacctatggtgcccggtccttttggcccaggcggtgtgcccatcagtggcttt
gccatgctgcagcaccagatcaaagcagtgcacgagtcagcgcaccaagaggagaagcag
aggcaggatcagggagacctggaacgcaggccgcccttcagcacccgcagccccaccgta
atagacagagatggtaagcccttaccctacatgccttatgacatgaagctggctctggac
caggaggtccactctggtcggccaggctctccctacagactctcccccagggagctgagc
agggcctcaccccagcttgaccccaacgcccccaatgcctcccgctacagtgtgccacca
gtcctccaccctgctgccaaccagctggtccagactatgcaagatggagtccgcgtgacg
ttcagcagacccagtcgacctcccaacattccctctcctcctccactcattccaacaacc
aagcccacagacaagccctccttcatccatggaggctccatctcccagggaactcctggc
acatacctgccgtcccacgctgtctatgggccagagggggctaagagcacagtgggctcc
atctctctgggtctgcctcggcagcaggatcctaacaagcctggaggtgtagttccatcc
atacaagatggcagaggcaacccagcaaagatgggtgagggtctgacaatgagaggttca
atcactcagggcacaccggccctgccccagtccagcattgctgctgacctcttgaagggc
acgatcacaaagttggccacagaggacctgagcagctcagacaaggcaaggggagaacag
atgtctaaaggtcatgtcatctatgaaggcaagagtggtcacatactatcgtatgatgct
atcaagaaccccagggaaaacacccgcagccccagaacaggccatgagctgaagcgcact
tacgacatgatggagggtccaatgggcaggggtcaccctggcagggagggagctccattt
gaggggttgatcagcagggccttgcccagagaaggtccacatggagatcctaaggaaaga
ccattgatcacaggatctatcatgcaaggaacacctagaaccgccgcagagacttatgaa
gatgccatgaaatatggaaaacagataaagcgagagagcccaccgatccgctccttcgaa
gggggcattggcaagggcaagccctatgagggagtcaatactatcaaagagatggggcgc
tccattcacgaaatccccagacaagatcagtctggccaggagatctgcaagacccctgac
ctgtcagacaggagggttatggagggctccatgtctcagattcaccctctcaaccagtct
actatcaagcacaacgtcaagtccctaatcaccagtccctctaagcttccccacagcatg
ccccagctcgaggccatggaacgagccaaatacgaggagagcaaggcggtacgccacact
tccgtcgtcaactccaccacctccgtcctgcgctccacacaccaagaggctggcaaatcc
caacttagcccaagcatgtatgaggaccccaacgctcgcaggacccctgtcaactacagc
accaatcccgtgtccagaggatcacccatgttgggacgtggaccagagggtgttatgagc
tctgggaaatctgctgcacatgaaagaaagagtgccatgaccccgactcagagggacaat
gtcccagccaagtccccggtgtcgggcggtgaccctcaccctgtggcctctcacagccct
ttcgacccccaccaccggcccgtcggtcctggggaagtgtacagaccccacctgcctcca
caccttgaccccgccatggccatgactctccacagagggctggatcctgcgttcatgttc
cccaggcagccgtctccaacaggctaccacaacacctaccagctgtataccatggagaac
acgcggcagacgatcctcaacgattatatcacctcccagcagatgcaagtcatccgacct
gacatggcccgagggttgtcaccacgggaacagcctgtcactatcccttacccagccgga
gcgcgagggattattgatctagcccagatgcctccaactatcctgttgcctcaccctggg
ggaacaggtactcccactttggaacgcatggcctacctccctggagctcagaaccctttc
cctcctagggctttcaacccgaactccatatcgccaggccaccaagcccaccttgctgct
gccgctgctgccagtgcagagagagaacgggagcatcgagaccgggagcatcgagaccgt
gagcatcgagaccgcgagcatcgtgaccgtgagcagcaggagaaagagagagaaaaggaa
agggaaagagagcaccgggagagggaacgagaacgggagcgggagatgcgagaacgagag
cgggagagagccaatgaatacatccgcggaggtggacaagaacagccaggacggccagga
agtcgaggttatctgcactccccttctccctcgctcaggacgcaggatgtagtggttcag
cagcggcctagcatcttccagggcaagagtgtcatcactgctctaatgccccattcagca
gcagcggcggcggcagcagcacagagtagctctcgctacagtactgcaactgatgctctg
gctgctctggtggacgctgctgcctctgccccgcagatggatgtggccaaggtgaaggag
agcaaacatgaacgggatgacgaaatgtcttcgtcggctgcagcccggcgagcggccagc
atctccgaacagcagcagcagctgcaacagcagctgcagcagcagcatcagcaacagcat
cagcaacagcatcagcaacagcatcagcaacagcagcatctgcagcagcagcatcagcaa
cagcagcagctgcagcaacaacagcagcagcagcagcagcagcaacaacaacaacaacaa
caacaacaacaacaacagcagcagcaacaacagcagcagcaacagcagcagcaacaacag
caacaacagcagcagcagcagcagcagcaggaggcagagaggcggtctatgcagtcacca
tatggcgctatgtctctgccagggggtaagccccatccagcttactctgagggccccgga
gttggtgttaaggacaagggccctcaaacctcaaagtcccgcatcgaagaggagcttcgg
actcgtggaaagacgactatcacagccgccaacttcatcgatgtcatcatcacacggcag
atagcctcagacaaagattcacgagagcgaggttctcagagttccgactcctctagcagc
ttgtcatccagtcgatatgacaacacgggtggaggagccattgaggtgataagccctgct
agttccccaatccaaccccaacaggacaaaccagaggaagggcaacaacaggcagcagtg
ccttgtcaaccttcaccagctggcatgcgggcttatgacatgagtcgttaccggccatca
ggggagccaccacagcccagttcccagcagcccccttcctcccaggttgagagctactcc
caggtccccaagactcaccgggtcatgaccttggcagaccacatttcgcatattataacc
caggacttcgcccggaatcaggaccctcctcctgtctcctcctcatcttcagccacattc
cagagcgcggtgccacatgtttcctcttcagggcgagccaagatgcccagccgctacagt
cctgagaatcaggtccagctatcccaccaccaaagaccctccagcagagtttccccagag
aatgcccctgacaagcctagagccaggccgggtaaatctccagagcgaggcggcaggcag
atggagaactatgaacccatctctccaccacagagctaccaaggcatggacaaacaggag
gcgatcgggcctccgccccagagacgagaggctgacaactctgagatcaggaatgactca
cggtccccagggaatgtcagctatctgccttccttcttcaccaaactggagaacacctca
ccaatggtgaaatcaaagaagcaggagatctttcgtaagttgaactccaactctggtctc
ggtgattctgatgttggaaatgcacaaccaggcacagagattttcaatttgcctgctgtt
accagctcaagcagcatcaacccaaggaatcactcatttagtgacccggccagtaacctg
ggcctggaggacatcatccgcaaagccttgatgggcaacttggaggagagacaggaggat
caccagggaggactaggggctcagtgtgccatgaacaacacatccggccaaggcagtgac
gcccgccaggaggccaacccgtcacccagtatgggtaagcagaagcacggcaaagccagc
agccgaaaatccaagtcccctaaccttggtcaggcctacgccggaggggagcgtccgtct
tctgtgtcctccgtccactcagagggagattatcacagacaagcccaagcccaaccccaa
tggagctgggacgaccgaccttcgtcaacaggatccatgcagttcccttacaacccgctg
accatgcgcatactgagcagcacgccacccacctccatagcttccccctccatacagagc
cagcagcagcaacagcaacagcagcagcagcagcagcagcagcagcagcagcagcagccg
cagccgcctccagctggagccccggtggcccagcagcgtgtgtggcagtctctgctgtca
gagcaatatgagaccctgtctgacagcgacgactga
DBGET
integrated database retrieval system
