Anoplopoma fimbria (sablefish): 129114003
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Entry
129114003 CDS
T09102
Symbol
nova1
Name
(RefSeq) RNA-binding protein Nova-1
KO
K14944
RNA-binding protein Nova
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129114003 (nova1)
Spliceosome [BR:
afb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129114003 (nova1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
KH_NusA_2nd
DUF1233
Motif
Other DBs
NCBI-GeneID:
129114003
NCBI-ProteinID:
XP_054482480
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All DBs
Position
24:complement(22367791..22386783)
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AA seq
472 aa
AA seq
DB search
MDTDNPDSRKRPLETPAEEAGCTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQ
KETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSAQKPEPVSIL
QPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERV
VTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSNVSGPVANSNPTGSPYANTAEVLP
NAAAAAATASSLLGQAGLTGMGAFPATMSSFSGNDLLAITSALNTLASYGYNTNTLGLGL
NPAAASGVLAAVAASANPAAAAAANLLASYASDASGGAGHHAAGLGGFSLGSLAAATGAS
NGYLNASSPLMASSLLATEKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARI
QISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRITYEQGVRATNPQKVG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggacactgataacccggactcccgcaagcgaccgctggaaactccggcggaggaggcc
ggctgtaccaagcgcaccaacactggagaggagggcgagtacttcctgaaggtgctgatc
cccagctatgcagccggctctataatcggcaagggcggccagaccatcgtacaactgcag
aaagagacgggtgccaccattaagctgtccaaatccaaagacttctacccaggaacaaca
gaacgggtttgtctgatacagggtactgtcgaggctctcaatggtgtccataacttcatt
gcggagaaagtccgcgagatgccccagagcgcacagaaacccgagccggtcagcatactg
cagccgcagaccaccgtcaacccagaccgtgtcaaacaggccaaattgatcgtgcccaat
agcacagctggcctgatcattggcaagggaggagccacggtcaaagcagtgatggagcag
tcaggggcttgggtgcagctttcccagaagccagagggcatcaacctgcaggagcgggtg
gtgaccatcagtggggagcccgaacagaaccgcaaggctgtggagatcatagtgcagaag
atccaggaggacccgcagagcagcagctgcctcaacatcagctactccaacgtctcgggc
ccagtggccaattccaaccccaccggctccccctacgccaataccgccgaggtgctgccc
aatgcagccgcagcagccgccaccgcctccagccttctgggccaggccggcttgacagga
atgggcgccttccccgccaccatgtccagcttctctggcaacgatctgctggccatcacc
tcggccctcaacacgctggctagctacggctacaacactaacaccctaggtctgggcctc
aaccctgcagctgcttctggggtcctcgctgcagtagcagccagcgccaacccggctgct
gccgccgcagccaacctactggcctcctacgctagcgatgcctctggcggcgctggccac
catgctgcaggcctcggtgggttctccctgggttctctagcagctgctacaggggcttcc
aatggttaccttaatgcttcatccccactgatggcctcctccctattggcaacagagaag
ctggcagatggggccaaggacgtggttgagatcgctgtgcccgagaatctggtcggcgcc
attttggggaaaggagggaaaacgctggtcgagtaccaggagctaacgggagcccgcatc
cagatctccaaaaagggagagttcattcctggtactcggaaccgtaaagttaccataaca
gggtctccagccgctacgcaagcagcgcagtatctgatcagccaacggatcacttacgag
cagggcgtgcgcgctaccaacccacaaaaggtgggctaa
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