Anoplopoma fimbria (sablefish): 129114066
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Entry
129114066 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: glucocorticoid receptor-like
KO
K05771
glucocorticoid receptor
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129114066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129114066
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
afb03310
]
129114066
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
129114066
Nuclear receptors [BR:
afb03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
129114066
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Motif
Pfam:
Hormone_recep
zf-C4
GCR
Motif
Other DBs
NCBI-GeneID:
129114066
NCBI-ProteinID:
XP_054482548
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Position
24:complement(9679961..9743265)
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AA seq
801 aa
AA seq
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MDQGGLKRNGNRDDSLTFGETAAGVCRDAGDTAGPLLQTATHPPGPGSLPQPTVGPNGGC
GTKEQGELGGLFDSPQHRVLCEGSDLEEGKITRMTKQNQDIGGFNVEGNLALLKRSISAL
DRTATSVISTSVSSILGNLPLPDLFPLHIKQEANFSLDKDPETYSGHSGTGPCDLDGNSG
RQMEDIEIWQDLDLPTSLPEISDFDLDSEVAHLDNILHDSRGGGGXGNGGSVSGLLKETK
PLMGNGVNCGSVNGSDQQHHPIHQQHQQHPLLQHQHQQHQLHHQQPPTSLLSSVMIKEEK
DPDDSFIHIRTPGVVKQEKQESAGFCQAQACLQSGMSSLHGGGPMSSSMGVGVGSNYHYR
ANASSTVGLQDQEPFGMYPNLPLVGESWARGNRFGESSGLQRGDDGLPSAAALSSFSVSF
SSSSPRAGETGSSAVPGQSKPGGQTHKICLVCSDEASGCHYGVVTCGSCKVFFKRAVEGW
RARQNTDGQHNYLCAGRNDCIIDKIRRKNCPACRFRKCLKAGMNLEARKNKKMKNKPPSM
PVAVIPRPMPQLVPTMLSVLKAIEPEVIYSGYDSTLPDTSSRLMTTLNRLGGQQVISAVK
WAKSLPGFRNLHLDDQMTLLQCSWLFLMSFSLGWRSYEHCNGSMLCFAPDLVINKERMKL
PFMTDQCEQMLTICNEFVRLQVSYDEYLCMKVLLLLSTVPKDGLKSQAVFDEIRMTYIKE
LGKAIVKREENASQNWQRFYQLTKLLDSMQEMVEGLLQICFYTFVNKTLSVEFPEMLAEI
ITNQIPKFKDGSVKPLLFHQK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggatcagggtggactgaagcgcaacggtaatcgagacgacagcctgacatttggggag
acagcagccggagtatgcagggatgcaggtgacacagctggtccactgctccagactgca
acacacccgcctggccccgggtctctgccacagcccacagtgggcccaaacggagggtgt
ggaaccaaagagcagggggagctgggaggcctctttgactcccctcagcatcgtgtcctg
tgtgaggggtcagacctggaggagggtaaaatcactagaatgacgaaacaaaaccaggat
atcggcggattcaacgtggagggcaacttggcgctgctgaaacgcagcatttccgctctc
gaccggacggccacctctgtcatcagcacctcggtgtcctccatcctgggcaacctaccc
ctgccagaccttttcccgctgcacatcaagcaggaggcaaatttttctctggataaagac
ccggaaacttacagcggacactcaggcactggcccttgtgacttggatggcaacagcggc
cgccaaatggaggatatcgagatttggcaagacctggaccttcctacttccctgccagaa
atcagcgattttgatttggattcagaagtggcacacttggataacatcctacatgacagc
aggggcggcggcggcnngggcaatggtggctccgtcagcggcttgctaaaggaaacgaag
cctctcatgggtaacggagtgaactgtggcagtgtgaatggctcggatcagcagcaccac
cccatacaccagcagcaccagcagcacccccttctacagcaccagcaccagcaacatcag
cttcaccatcaacagccgccgacatcacttctctccagcgtcatgatcaaggaagagaag
gatccggacgactctttcatccacatccgtactcctggggttgtcaaacaggagaagcag
gagagcgccggtttctgccaggcgcaggcgtgtctccagagcggcatgagctccctccat
ggaggcggccccatgtcctcatccatgggcgtaggagtaggatctaactaccactacagg
gccaacgcgtcctccacagtgggcctacaagaccaggagccttttggcatgtacccaaac
ctgcctctggtgggggagagctgggccagggggaacagatttggagagtcatccggtcta
cagaggggggacgatgggctcccctctgctgcagccctgtcaagtttttctgtcagcttc
tccagctcatcacccagagctggagagactggcagttctgcggttccaggccaatccaag
cctggtgggcagacgcataagatctgtttggtgtgttctgatgaggcctcaggatgccac
tacggggtcgtgacctgcggcagctgcaaggtgttcttcaagagggccgtcgaaggctgg
agagcgagacaaaacacagatggtcagcacaactacctgtgtgcagggagaaatgactgc
atcattgataagatccggaggaagaactgtccagcctgccgcttcaggaaatgtcttaaa
gccggaatgaatttggaagcgaggaagaacaagaagatgaagaacaaacctcccagcatg
cccgttgcagtcatccccaggccaatgccccaactcgtgcccaccatgctgtccgtgctc
aaggccatcgagccagaggtcatctactcgggctatgacagcactctgcctgataccagc
tcgcggctcatgaccactctgaacaggctggggggacagcaggtcatctctgcagtgaag
tgggcaaagtctctgccaggtttccgcaacctgcacctggatgaccagatgacattgctg
cagtgctcctggctgttcctcatgtccttcagtcttggttggaggtcttatgagcattgt
aacgggagcatgctctgcttcgcccctgatctcgtcatcaacaaagagcgtatgaagctg
cccttcatgaccgaccagtgcgagcagatgcttacaatctgtaatgagttcgtcagactg
caggtgtcctatgacgagtacctgtgcatgaaggtcctgttactgctcagcacagtacca
aaagatggcctgaaaagccaggcggtgtttgacgagatccggatgacgtacatcaaggaa
ctgggaaaagccatcgttaagagagaggagaacgctagtcagaactggcagcgtttctac
cagctaactaagctactggactccatgcaggagatggtcgagggtcttctccagatctgt
ttctacacttttgtgaataaaaccctgagtgtggaattcccagagatgctggcagagatc
atcaccaaccagataccaaaattcaaagacgggagcgtcaagcctcttctgtttcatcag
aaatga
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