Anoplopoma fimbria (sablefish): 129114075
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Entry
129114075 CDS
T09102
Symbol
dtx2
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129114075 (dtx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129114075 (dtx2)
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129114075 (dtx2)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129114075 (dtx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
TFIIA
zf-UDP
zf-rbx1
zf-RING_2
zf-LITAF-like
Motif
Other DBs
NCBI-GeneID:
129114075
NCBI-ProteinID:
XP_054482564
LinkDB
All DBs
Position
24:complement(2085047..2100911)
Genome browser
AA seq
667 aa
AA seq
DB search
MALVSGSCARVNGSRSGPPVPPPPLPGSQPMIAVWEWQDDLGYWRPYSGPVSAHIERSLA
PRRGGGGGGGGGAGGAAGGSSIVLGQSDPSLSPYLIDIPSLKQFRQDTGKTRSVRRSLFA
QSSGLGSGVYWEWLNDEGGWTPYETRTSIHLEHSYQARQGTADLGAHGYNYIVDLTSLAQ
VNKGTGFRRQVRRQCNLPYPLASSGPPAIPSGPACSCQQCLSHSSTGPMPSRSRHSFSSG
SLTRPSLQATGRATAAHPTSVYSPYPRRPLSVGGMSWGSPWPPPPSGSQLSTPLLTSSTS
ANGLSVPSISVQLNGSTSVSSALAGMASILMSAVGLGVHFTTAPLPQQQQQQPPPQQQPP
PQQLQQLHQLQQQQQPAPFSLPPPLLPPASRPSKPHSSSSSSSSSSVRRAKRQHRRASAQ
RPEDVIQRYMEVVPGVQDEDCIICMDQLSNPSGYETQSTEGGGQSTLPDTVGKFIKCGHT
LHMLCMLAMYNNGTKDGSLQCPSCKTIYGEKTGMQPKGKMEIYSIAQSLPGHPDCGTIQI
IYSIPPGLQGPEHPNPGQPFTCRGFPRFCFLPDNDKGRKVLELLKVAWMRRLIFTVGTSS
TTGEPDTVVWNGIHHKTEMMSNMSGHGYPDPNYLDNVLSELASQGVTEDCFKPPAGVGGG
GGGGGGS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcccttgtgtccggctcctgtgcccgggtcaacggctccaggagcggcccgccggtg
ccgccgccgccgctgcccgggtcgcagcccatgatcgcggtgtgggaatggcaggatgac
ctcggctactggcggccttacagcggaccagtcagcgcacacatcgagcggagcctagcg
ccgcggagaggaggaggaggaggaggaggaggaggagcaggaggagcagcaggaggctcc
agcatcgtcctcggacagtcggacccgagcctgtcgccgtatctcatcgacataccgagc
ctgaagcagttccgccaggacaccggaaagacacggtcagtgcgtcggtccctgtttgcc
cagtcctccggcctcggcagtggtgtttactgggagtggctcaacgatgagggaggatgg
actccatatgagactcgaacctctatccacctggagcacagctaccaggcccgccaaggc
acggcggacctgggcgcgcacggatacaattacatagtggacctcacatctctggcccag
gtcaacaaagggacgggtttcaggcggcaggtccgacggcagtgcaacctcccctacccg
ctggcctcctcggggcccccggccatcccgtcgggccccgcctgctcctgccagcagtgt
ttgagccacagcagcacgggacccatgcccagccgctcacgccattcattttcatcgggc
agtctgacccggcccagcctgcaagcgactggaagggccacagcggctcaccccacttct
gtctactcgccgtacccgaggagacccctctctgtgggggggatgtcctggggcagcccc
tggcctcctccgccctctggtagtcagctgtccacaccgctcctgaccagctctaccagc
gccaatgggctcagcgtcccctccatctctgtgcagctgaacggatccaccagtgtgagc
tctgccctggcaggcatggcctccattttgatgtcagcggttggactcggcgtgcacttc
accactgcccccctccctcagcagcagcagcagcagccgccgccacagcagcagccgccg
ccacagcagcttcagcagctacatcagcttcagcagcagcagcaacctgctcctttctcg
cttcctcctcctctcctccccccagccagcaggcccagcaaaccccacagcagcagcagc
agcagcagcagcagttcagttaggagagcaaagaggcagcacaggagagcctcagctcag
agacccgaggacgtgattcagcgctacatggaggtagttcccggagtccaggatgaggac
tgcattatctgcatggatcaactgtccaatccatccggctatgagactcagtccacagag
gggggggggcagagcaccctgccagacaccgtggggaaattcatcaaatgtggacacacc
ctgcacatgctctgcatgctggccatgtacaacaacggaacgaaggacggcagtctgcag
tgtccctcgtgtaagacaatctacggagagaagacgggcatgcagcccaaaggaaagatg
gagatttacagcatcgcccagtcgctgcccggacaccccgactgtggcaccatccagatc
atctacagcattccacctggactacagggcccggagcatccaaacccaggacagccgttc
acctgcagaggcttccctcgcttctgttttctacccgacaacgacaaaggcaggaaggtt
ctggagctgctgaaggtggcgtggatgcggcgcctcatcttcaccgtggggacgtccagc
accaccggagagcccgacacggtggtgtggaacggcatccaccacaagacggagatgatg
tccaacatgtcgggacacggatacccggaccccaactacctggacaatgttctgtctgag
ctggcgtctcagggcgtgacagaggactgcttcaagcctccggccggcgttggcggcggt
ggtggcggcggcggcggcagctag
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