Anoplopoma fimbria (sablefish): 129114269
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Entry
129114269 CDS
T09102
Symbol
arhgap21b
Name
(RefSeq) LOW QUALITY PROTEIN: rho GTPase-activating protein 21
KO
K20315
Rho GTPase-activating protein 21/23
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129114269 (arhgap21b)
Membrane trafficking [BR:
afb04131
]
Endosome - Golgi transport
Others
Others
129114269 (arhgap21b)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
129114269 (arhgap21b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH_9
PH
PDZ_6
PDZ
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129114269
NCBI-ProteinID:
XP_054482601
LinkDB
All DBs
Position
3:complement(16665557..16699117)
Genome browser
AA seq
1808 aa
AA seq
DB search
MASRWVHPCEDDERQHARSSFCENESPEWRSLADSPAAQYPTEEEPFSWPRPKTVRLRRT
TQGFGFTLRHFIVYPPESTMHCFPEEDHGRRGGQRNRLEPMDTIFVKQVKEGGPGHGAGL
CTGDRIVKVNGASIIGKAYCEVISLIQDSGDFLELCVMPKDEDILQLAYSQDAYLRCRSS
YSGNACHIPEPPPVCYPRVDCKPTGMAQATDASGQLCRGPPAPPDHGYRKEITVPPSPPP
PSYPKSQMAVCMRNDSVRTVVVPPDSAQIGRMGPTHRIDYMDPVFARGRPGSLAQYPHAL
KADVYPSGPGMVQYGGQAPHYPGNNQNIDWRTYQTYREYIDNKGIHSHGSRTIQERLDNL
RASNQTTFGASHHIPRGDWGPKGIRRRSTSHERSYQGPPPHFQIAPRSASQDRMSGPERM
GHTRNWPPRSVSQDGLMHKARAHSTDYVDPAELARPNDRRGGYGRADQGTRPSRQSVPRH
AMLYRPSAGYSGGMRGAPNPSLYSKGPDSLQTRSSPMLSDRHSHYVKSTSAEHSLIDQRV
AVKGKHATHSIQQGQSRILAETMLAVEAGRDTALVGHRSSSCSTPKHMPQRPSILKPPHP
NSQSHVNGRSPLDSGVILREKPPPGKNPSPLRHPSYILAVNDDGPDSTADVAACWLPNDA
RREIRMRRLGEQCHTSCSSNLDESLDSIPFIDEPISPSVDREAPPIPPSAVISVAPSITT
DPSTPGSPCPPIRRQLSHDQESLRSALLESDATSKTERSKSYDEGLDNYQEQGRRRSSSK
NMPGLKGLRKALDGHKSSGDSGSRRDSSSDIFANSSKEGLLNLRQLSTDKNKRVSGGMRS
WKPMYAVLQGHTLTLYKDRKDAVSHASTPSDEDPLRISIKACLVDISYSDTRRKNVLRLT
TSDCEYLFQAEGRDDMLSWIRVIQENSNPDEENAAVTSQDLISRKIKEYNMMSTPSSRSE
PSPKTSRQSLSIKQAFLGGKTEGKIHSPHSPKTGEDRRAMKDDSSPPRDRAAWKIGIAGI
MRKPFEKKTPAGVTFGVRLDDCPPAQTNRFVPLIVEVCCNVVEERGLEYTGIYRVPGNNA
AISSMQEELNSKGMTDIDVQEDKWRDLNVISSLLKSFFRKLPEPLFTNEKYGDFIEANRA
EDSVDRLRELKKLIQELPDHHFETLKYLCAHLKKVSDNCEKNKMEPRNLAIVFGPTLVRT
SEDNMTNMVNHMPDQCKIVENLIQQYDWFFTDDSDEDPVTTAEQESTVQSQPVPNIDHLL
SNIGRCTASPGEVSDSACSDSSKSKGLWGSGKDQCSKEMLRSSFFASRKRKKPKDKAHPS
SSDDDLDAVFPKKELAEEGRQKPMWSPDSRTEDXETDETSEKDKHRTSSEEHVDRPNRKE
SLSCSLISQPSPSQPPEHISSPLQSGSPYASPTHSPDLSYRMPMAHQSSLSDPPSNYDDT
VSDLGTMNSTSSQASVPRVRRGRGVALGPETGPSGLGAEVCSITSDYSTTSSMTFLTGAE
LSTLSPEVQSVAESRGGDDADDERSELISEGRPMETDSESDLSVFTVGKTDQRELQEAPR
PLPSHRLIECDTLSRKKAAQQKTVSESSLDGAWSDKDSNRLSCVLGSGKGCSTGSLSSSS
RGELDKAEPAWRLKITDRLKVRLRTSVDDMFGVGSQRSRSPEGRSKKKNIRRRHTMGGQR
DFAELSVLGGWSQHVGIGSGSRSELSAVDQLKPKCSSQDFSIRDWIVRERHRTSNPEVSL
DLSEQQGGLCSGNSQNLGASSSSEPQHRSADVLNGDVPQSKSLSLSATAHPHKLTNSQVV
HSRFYQYL
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacgttgggttcatccttgtgaggatgatgagaggcaacacgcaagatcttct
ttctgtgagaatgaatctccagagtggagaagcttggctgattcccctgcagcgcaatac
ccaacagaagaggagccgttctcatggccgagacctaaaaccgtgcgtttgcggcgtact
acccaagggtttggcttcaccctgcggcacttcatcgtgtacccgccagagtccaccatg
cactgcttcccggaggaagatcatggccgaagagggggacaacggaataggcttgaacca
atggacaccattttcgtgaagcaagtcaaagaaggaggccctggtcacggagctgggctt
tgcacaggtgatcgaatagtgaaggtgaatggagcgagcatcatcgggaaagcctattgt
gaggttatatccttgatccaagacagtggtgactttctagaactttgtgtgatgccaaaa
gatgaggatatactgcaactggcctactcccaggatgcctacctccgttgccgcagcagc
tacagtggaaatgcctgtcacattcctgaaccacccccagtatgctaccccagagtagac
tgtaagcctacgggcatggcccaggcaacagatgcatcagggcagctctgccgagggcca
ccagcacctcctgatcatgggtaccgcaaggagatcacagtgcccccatcccctcctcct
ccatcatatccaaaaagccagatggcagtgtgcatgcgcaacgacagcgtgcggactgtg
gtggttcctcctgactcagcccaaatcgggcgcatgggtccaacacataggatagattac
atggacccggtctttgccagaggaaggcctgggtcactggcccagtatcctcacgctcta
aaggctgatgtctatcccagtggtcccggaatggtccaatatggaggtcaggcccctcac
tacccaggcaacaatcaaaacattgattggcgcacttaccaaacatacagggagtacatt
gacaacaaaggaatccattcccatggtagtcggactatccaggagagactggacaatttg
cgagcatccaatcagaccacctttggcgcctcacatcacattccccggggagactggggc
cctaaggggatacgacggaggagtacttcccatgaacggtcataccaaggacctccaccc
cactttcaaattgccccacgcagtgcttcgcaggaccgtatgagcggtccagagagaatg
ggccataccaggaactggcctcctcgaagcgtgtcgcaagatggcctgatgcacaaagca
cgggcacactccacagactatgttgaccctgcagagctggctcggcccaatgacaggaga
ggagggtacggaagggcagaccaaggtacgaggcccagcagacagtctgtccccagacac
gccatgctctacagaccatctgctgggtacagcggtggcatgaggggggcaccaaaccct
tctctttactctaaaggaccagattctcttcagacccgctcctcacccatgctctcagac
agacactcacattatgtaaagagcacaagtgctgaacattctcttattgaccaaagagtt
gccgtcaaaggaaaacatgcaacccactctatccaacaaggccagagcaggatcctggct
gaaaccatgctggctgttgaggcaggtagagacacagcattggtaggacacaggtcttct
tcatgctccaccccaaaacacatgcctcagaggcctagcatcctcaaaccacctcatcca
aactcccagagtcacgtcaacgggcgaagccccttggacagcggtgtcattctaagggag
aaacccccccctggaaagaaccccagccctttgcggcacccctcctacatcctggctgta
aatgatgacggacccgattccacagcagatgtggcagcatgctggcttccaaacgatgca
cgtcgagagatacgcatgcgccgccttggggaacaatgtcacacctcctgctccagcaac
ctggatgagtctctggactccattccattcatcgatgagccaatcagccccagtgtcgac
cgggaggcccctcctattccaccatcagctgtgatatctgttgcaccatccataactaca
gatccatccactccaggctcaccatgccctcccattcgtcgacagctgtcacatgaccaa
gagtccctgagaagtgctttgttggagtctgatgcaaccagcaaaacagagcggtccaaa
tcttatgatgagggtctggataactaccaggagcagggtagaaggagatcttccagtaag
aatatgcctggtctcaagggcctgaggaaggctctggatggacataaatcttctggtgat
tcgggatctcgaagggattcttcttcagatatctttgccaattcttccaaagaagggttg
ctcaatttgaggcaacttagtacggataaaaataagcgcgttagtggaggaatgagatca
tggaagccgatgtatgctgttttacaaggtcacactctaaccctctacaaagacaggaag
gacgcagtgtctcatgcgtcgacgccatctgacgaggacccactgcgaatcagcatcaag
gcctgtctggttgacatctcctatagcgacacaagacgcaagaatgtgctgcgactcacg
acctcagactgcgagtatttgttccaggcagaagggagggacgacatgctgtcttggatc
agagtcattcaggaaaacagtaacccagatgaagagaatgctgctgtcacaagtcaggac
ttgatcagtcgaaagatcaaggaatacaacatgatgagtacgcccagcagcaggtctgag
ccgtcccccaaaacttcccgtcagtccctaagtattaaacaagccttcctgggaggtaag
acagaaggcaagatccacagtcctcattcacccaaaacaggagaggataggagggcaatg
aaagacgactccagcccaccacgggacagagctgcttggaaaattggcattgcagggatc
atgaggaagccctttgaaaaaaagactccagctggggtcacgttcggggttcggcttgat
gactgtccacctgcacaaaccaacaggtttgtccctctgattgtggaggtctgctgtaat
gtggtggaggagagaggccttgagtacacaggaatctacagagtgcctgggaacaacgct
gccatctccagcatgcaggaggagctcaacagcaaaggcatgactgacatcgacgtccag
gaagacaaatggcgggacctcaatgtcatcagtagtttacttaagtcctttttccgaaaa
cttccagaaccgctgtttacaaatgaaaagtatggtgactttattgaagccaacagagca
gaagactcagtggacagattaagggagctcaagaagctgatacaagaattacctgatcat
cactttgaaactctgaaatatctttgtgctcacctcaagaaggtttctgacaactgtgaa
aagaacaagatggagcctcgtaatctggcgattgtgtttggtcctacgctggtcagaacc
tctgaggacaacatgaccaacatggtcaatcacatgccagaccagtgcaagatagttgag
aaccttatccagcaatacgactggttcttcactgacgacagcgatgaggaccctgttacc
acagctgagcaggagagcacagtgcagtctcagcctgtgcccaacatcgaccacctgctc
tccaacattgggcggtgcacagcgtcacccggcgaagtctcagattcagcatgtagtgac
tcctccaaatcaaagggcttgtgggggtcagggaaggatcagtgtagcaaagagatgctg
cgctcctccttcttcgccagccgcaaacgaaagaagcccaaggacaaagctcatccaagc
agttcagacgacgacctggacgctgtgttccccaagaaggagctcgctgaggagggccgg
cagaagcccatgtggtccccagacagccggaccgaggacngagagacggatgaaaccagt
gagaaagacaagcacaggaccagctcagaggaacacgttgaccgacccaacaggaaagag
tctctctcttgcagcctgatatcgcagccttctccctcccagcccccggaacacatttcc
tccccccttcaaagtggctcaccctacgcctcgcccacccattcccctgacctcagctac
cgcatgccgatggctcaccagtcctctctgtcggacccgccttccaactacgacgacacg
gtgtccgacctcggtacgatgaacagcaccagctcccaggcatcggtgccaagagtgagg
cgaggaaggggggtggcactgggtccagaaactggcccgagcgggctgggagcggaggtc
tgctccatcacctccgactactccaccacctcctccatgacgttcctgactggagctgaa
ctcagcaccctcagtcctgaagtgcagtccgtggcggagagcaggggtggagacgatgca
gacgacgagagaagtgagctcatcagcgaagggcggccgatggagacggacagcgagagc
gacctgtcggtgtttacagtcgggaagactgatcagcgagaactgcaggaagctcctcga
cccctcccctctcacagactcatcgagtgtgataccctctccaggaagaaagctgctcaa
cagaaaaccgtcagcgagtcttcactggatggcgcttggagcgataaagattccaacaga
ctgtcgtgtgtgttggggtcgggtaaaggttgctccacaggcagcctcagctcctcgtct
cgtggcgaattagataaggcagagcctgcatggaggctcaagatcactgacagactgaag
gtgcgtctgcgaacgtctgtggacgacatgtttggcgtgggcagccagaggagccggtcc
ccggagggccgcagtaagaaaaagaacatccgacgcagacacaccatgggcggccagagg
gactttgcagagctgtctgttttgggaggctggtcgcaacatgttggcatcggctcaggc
tctcggtcagagctgtcagctgtggaccagctgaagcccaagtgcagctctcaagacttc
tccattagggactggatcgttcgcgagcgccatcgcaccagcaatcccgaggtcagcctg
gacctctctgaacagcaggggggactgtgcagcggaaactctcagaacctcggagcttcg
tcctcttctgaaccccagcatcgttcagctgatgtgttgaacggagatgtcccccagagt
aaaagtctgagcctttcggccaccgctcaccctcataaactcactaattcccaggtggtc
cattcgcgcttctaccagtacctgtga
DBGET
integrated database retrieval system
