Anoplopoma fimbria (sablefish): 129114361
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Entry
129114361 CDS
T09102
Name
(RefSeq) fizzy-related protein homolog
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04110
Cell cycle
afb04120
Ubiquitin mediated proteolysis
afb04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129114361
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129114361
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
129114361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129114361
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
129114361
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_1st
Beta-prop_SCAP
ELYS-bb
Beta-prop_VPS8
Ge1_WD40
Beta-prop_SPT8
Tom37
Motif
Other DBs
NCBI-GeneID:
129114361
NCBI-ProteinID:
XP_054482620
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Position
3:24724962..24732287
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AA seq
496 aa
AA seq
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MDQDYECRLLRQINIQNENASPIKAVGAVRALTPTSSPLSSPSKHGDRFIPSRAGANWSV
NFHRINEIEKSHNQNRKTKDGTTDSNKADGLAYSALLKNELLGAGIEKVQDPQSEDRRLQ
PSTPAKRSLFSYSVSAKRALPEEDGNTVSPYSLSPVSSNSQKLLRSPRKPTRKISKIPFK
VLDAPELQDDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGW
SERGNLVAVGTHKGYVQIWDAAAGKKLSVLEGHTARVGALAWNADQLSSGSRDRVILQRD
IRAPPLQSERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSVLPVQQYTEHLAA
VKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCTDTGSQVCNLAWSKHTNELVST
HGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKMR
STKESVSVLNLFTRIR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggactatgagtgcaggctgctcaggcagatcaacattcaaaatgagaacgca
agccccataaaagcggtaggagcggtgcgtgcgctgacacccaccagctcccccctctcc
tcccccagcaagcatggcgatcgctttattccctcccgggctggagccaactggagtgtc
aacttccaccgcatcaatgaaattgaaaagtcgcacaatcaaaacagaaaaaccaaagac
ggcacaaccgacagcaacaaagcggatggtctggcttactcagctctgctgaagaacgag
ctgctgggagcgggcatcgagaaagtccaggacccccagtcagaagaccgccgcctgcag
ccatctactcccgccaagagaagcctttttagttattctgtaagtgctaagagggctctg
ccagaagaggatggaaacacagtctctccatattctctatcacctgtcagcagtaacagc
cagaagttgctgcggtcgccaaggaaacctacacgtaaaatatccaaaattcctttcaaa
gtcttggatgctccagagcttcaggacgacttctacctcaacctagtggactggtcctct
cttaatgtactcagtgttggactgggtacctgtgtctacctgtggagtgcctgcaccagt
caggtgacgcgtctatgcgatctttctgtagaaggagattcagtaacgtcagtgggctgg
tcggagaggggtaacctggtggcagtggggactcataaaggctatgtacagatctgggat
gcagcagcaggaaaaaagctctccgtactagagggacacacagccagagtgggtgcgttg
gcatggaatgcggaccagctgtcgtctggaagccgtgatcgggtgatcctccagcgggac
atcagggccccgcctctccagtcagagcgccgtctccaaggacacagacaggaagtctgc
gggctcaagtggagcacagaccaccaactgctagcctcgggtggaaatgacaacaagcta
cttgtgtggaaccactcgagcgtactcccggtgcagcagtacacggagcacttggctgcg
gtgaaggccatcgcctggtctccccaccagcacggcctgctggcctccggaggcggaacc
gcagaccgctgcatccgcttctggaacactctgaccggccagcctttacagtgcacagac
actggctctcaggtctgcaacctggcctggtccaaacacactaatgaactggtcagcaca
catggttactcccagaaccagatcctggtgtggaaatatccctctctcactcaagtggca
aaacttactggacattcctacagagtgctctacctggccatgtcccctgacggagaggcc
attgtgacgggagctggagatgaaacacttcggttctggaacgtctttagcaaaatgaga
tcgacaaaggaatcagtgtcggttctaaacctcttcaccaggatccgttag
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