KEGG   Anoplopoma fimbria (sablefish): 129114361
Entry
129114361         CDS       T09102                                 
Name
(RefSeq) fizzy-related protein homolog
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04110  Cell cycle
afb04120  Ubiquitin mediated proteolysis
afb04914  Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129114361
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    129114361
 09150 Organismal Systems
  09152 Endocrine system
   04914 Progesterone-mediated oocyte maturation
    129114361
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:afb04121]
    129114361
Ubiquitin system [BR:afb04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     129114361
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_EML Beta-prop_WDR19_1st EIF3I Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR41 Beta-prop_WDR35_TULP_N Beta-prop_RIG_1st Beta-prop_SCAP ELYS-bb Beta-prop_VPS8 Ge1_WD40 Beta-prop_SPT8 Tom37
Other DBs
NCBI-GeneID: 129114361
NCBI-ProteinID: XP_054482620
LinkDB
Position
3:24724962..24732287
AA seq 496 aa
MDQDYECRLLRQINIQNENASPIKAVGAVRALTPTSSPLSSPSKHGDRFIPSRAGANWSV
NFHRINEIEKSHNQNRKTKDGTTDSNKADGLAYSALLKNELLGAGIEKVQDPQSEDRRLQ
PSTPAKRSLFSYSVSAKRALPEEDGNTVSPYSLSPVSSNSQKLLRSPRKPTRKISKIPFK
VLDAPELQDDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGW
SERGNLVAVGTHKGYVQIWDAAAGKKLSVLEGHTARVGALAWNADQLSSGSRDRVILQRD
IRAPPLQSERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSVLPVQQYTEHLAA
VKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCTDTGSQVCNLAWSKHTNELVST
HGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKMR
STKESVSVLNLFTRIR
NT seq 1491 nt   +upstreamnt  +downstreamnt
atggatcaggactatgagtgcaggctgctcaggcagatcaacattcaaaatgagaacgca
agccccataaaagcggtaggagcggtgcgtgcgctgacacccaccagctcccccctctcc
tcccccagcaagcatggcgatcgctttattccctcccgggctggagccaactggagtgtc
aacttccaccgcatcaatgaaattgaaaagtcgcacaatcaaaacagaaaaaccaaagac
ggcacaaccgacagcaacaaagcggatggtctggcttactcagctctgctgaagaacgag
ctgctgggagcgggcatcgagaaagtccaggacccccagtcagaagaccgccgcctgcag
ccatctactcccgccaagagaagcctttttagttattctgtaagtgctaagagggctctg
ccagaagaggatggaaacacagtctctccatattctctatcacctgtcagcagtaacagc
cagaagttgctgcggtcgccaaggaaacctacacgtaaaatatccaaaattcctttcaaa
gtcttggatgctccagagcttcaggacgacttctacctcaacctagtggactggtcctct
cttaatgtactcagtgttggactgggtacctgtgtctacctgtggagtgcctgcaccagt
caggtgacgcgtctatgcgatctttctgtagaaggagattcagtaacgtcagtgggctgg
tcggagaggggtaacctggtggcagtggggactcataaaggctatgtacagatctgggat
gcagcagcaggaaaaaagctctccgtactagagggacacacagccagagtgggtgcgttg
gcatggaatgcggaccagctgtcgtctggaagccgtgatcgggtgatcctccagcgggac
atcagggccccgcctctccagtcagagcgccgtctccaaggacacagacaggaagtctgc
gggctcaagtggagcacagaccaccaactgctagcctcgggtggaaatgacaacaagcta
cttgtgtggaaccactcgagcgtactcccggtgcagcagtacacggagcacttggctgcg
gtgaaggccatcgcctggtctccccaccagcacggcctgctggcctccggaggcggaacc
gcagaccgctgcatccgcttctggaacactctgaccggccagcctttacagtgcacagac
actggctctcaggtctgcaacctggcctggtccaaacacactaatgaactggtcagcaca
catggttactcccagaaccagatcctggtgtggaaatatccctctctcactcaagtggca
aaacttactggacattcctacagagtgctctacctggccatgtcccctgacggagaggcc
attgtgacgggagctggagatgaaacacttcggttctggaacgtctttagcaaaatgaga
tcgacaaaggaatcagtgtcggttctaaacctcttcaccaggatccgttag

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