Anoplopoma fimbria (sablefish): 129114823
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Entry
129114823 CDS
T09102
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129114823
04121 Ubiquitin system [BR:
afb04121
]
129114823
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
129114823
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
129114823
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
ZBED1_RNase-like
ZBED1_RNase-like_helical
DUF659
FAM200-ZBED5_RNase-like
LA_1883
WHD_TFC3
Motif
Other DBs
NCBI-GeneID:
129114823
NCBI-ProteinID:
XP_054482702
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MRQHMLLKHGDVFGKADPQQPSVSAIFTAAKRSCNPGRGEKITTLITSMITKEMLPLSFV
DQKGFRDLMAFIEPEYTVPSRRTITARVEKMYAEKREQLKADLVTAKKVAITTDAWTSLT
TESYVTVTCHYVGDDWDLKTAVLETRSSDERHTAENIAAHLRAVTEEWGVHDKVVACVHD
NARNMVLANQQLLQWESVPCFAHTLQLAINDGFKNVNINRVVAACSKLISHFHHSTVASN
ALKIKQALQNLPTHKLIQYCRTRWNSIFEMMERLHEQRWAVTAALSDRTVTKLADARTLE
LKDEMWKSVEEILPSLKSLKCATAALCTETHVSLSMVLPVAKSLLEKHLEPMEGESKLVV
DFKRTVAGSLRTRVRPLEENISQAILASALDPRHKHLRFLDPALRLRTQEKLSELHDGVT
LQGPDDMGESSEAQACSVESTSEALDTLFGEDYYVNTSDVNELEAYFNEPCIRPHQNPME
WWKSNGDRYKKLSVLAKQHLVIPATSVPAERVFSAAGLIVNRMRSRLSPEHVDMLVPISQ
SPAMEAESKKLPAAEDTSPNESDFADNVGTQVIAK
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagcatatgctccttaaacacggcgatgtgttcggtaaagcagacccgcagcaa
cctagtgtgtcggctattttcaccgccgcaaaacgtagctgtaatcccggccggggagag
aaaatcacaacgctgattacatcaatgatcacaaaagagatgctgcctctgagttttgtg
gatcagaaggggttccgtgatctcatggcctttatagagcctgaatacacggtgccatcg
cggcgcaccatcactgctcgagtggagaaaatgtacgcggagaaaagggagcagttaaag
gccgacctggtgacagccaaaaaggttgcaataacaacagacgcgtggacttccctcaca
actgagtcctacgttacagttacctgtcactatgtgggagatgactgggacctgaagaca
gcggtgctggagactcgtagctcggatgagagacacacagcagagaacatcgctgctcat
ctccgagctgtcactgaggagtggggagttcacgataaagtagtagcatgtgtgcatgac
aatgcacgcaacatggtcctggcaaaccagcagctgctccagtgggaatcagttccctgt
ttcgcccatacgctacaattagcaattaatgacggctttaaaaatgtgaacatcaaccgg
gtggtcgcagcgtgcagcaagttgatttctcacttccaccacagcacagtggcatctaat
gctttaaaaataaagcaagcgctacaaaacctcccaacacacaaattgatccaatactgc
cggacacgatggaactcaatttttgaaatgatggagcgactgcacgagcagagatgggct
gtgaccgcagcgctttcggacaggacggtgacgaagctggccgatgcgaggacccttgag
ctgaaggacgaaatgtggaagagcgttgaagagatcttgccatcactgaagtccctcaaa
tgtgcgaccgcagctctctgcactgagactcatgtgtctctgtccatggtgctcccagtc
gcgaagagcctgcttgaaaagcatcttgagccaatggaaggggaatcaaagcttgtagtg
gacttcaagagaaccgtcgccggctccctccgaacccgtgtaaggccgcttgaagaaaat
atcagccaagcaatccttgcttctgcgcttgacccgagacacaaacaccttcggtttttg
gatccagcacttcgcctccgcacccaagagaagctgtcggaactgcatgacggggttaca
ttgcaaggcccagatgacatgggggaaagtagtgaagcacaagcctgcagcgtcgaaagc
acttcagaggcacttgacaccctcttcggggaggactactacgtaaatactagcgacgtc
aacgagctagaagcgtatttcaatgagccatgcatccgtccacatcaaaaccccatggag
tggtggaagtcaaacggggatcggtacaaaaaactgagcgttctggcaaagcagcacctg
gttatccccgccacctccgtgccagcggagcgagtgttctctgccgcgggactgatagtt
aatagaatgcgctctcgtctgtctccagagcacgtcgatatgctggtgccaatcagtcag
tctcctgcaatggaagcagagtccaagaagctccctgctgcagaagacacttcacctaac
gagtccgattttgcggataatgttgggacacaggtaatagcgaagtga
DBGET
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