Anoplopoma fimbria (sablefish): 129114961 Help Entry 129114961         CDS       T09102                                  Symbol tnr Name (RefSeq) tenascin-R   KO K06252   tenascin Organism afb  Anoplopoma fimbria (sablefish) Pathway afb04510   Focal adhesion afb04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:afb00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     129114961 (tnr)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     129114961 (tnr)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:afb00536]     129114961 (tnr) Glycosaminoglycan binding proteins [BR:afb00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    129114961 (tnr) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 Fibrinogen_C EGF_TEN EGF_Teneurin Ig_DSCAM-DSCAML_C EGF_Tenascin EGF_2 FN3_Tor_3rd Pur_ac_phosph_N Fn3_Dep-1_2nd Interfer-bind DUF4998 Motif Other DBs NCBI-GeneID:  129114961 NCBI-ProteinID:  XP_054482777 LinkDB All DBs Position 3:17289524..17355238 Genome browser AA seq 1290 aa AA seqDB search MPLAQHHRATVPTAIWILAFALNLALQGAVHAAPSGDNKLVRTTRVRRQTPGGDQPPSAS SANETLREQPVVFNHIYNINVPLESLCSVDLDASAPPATGDGSRAELGSRPSVEGPMDPS GPTEYMEQTLDADSQVTFTHRINIPKAACGCPSTTTIQQLATRVEMLEREVSLLRAQCGS GCCGESSAMGHLDFVPGCSGHGSFSFDLCGCICEEGWAGKNCSEPRCPDDCSGQGVCVEG ECVCDRDFGGDNCSEPRCPSDCSGRGLCIDGECVCEESFTGEDCMVGRCLNDCSDQGMCI NGTCQCRPGYVGEDCSLVYCANNCSKKGVCKEGFCICQDGFAGDDCNSVAPAMNVKIRGV TDCTVDVEWEGSVVLTDFLVTYTPSSPGGVQLEVRIPGNTTTYTISGLEAGMEYNINVFA VINNSISVPASITVSTYLSNPDGLVFKFITETSVEVQWLPFYYSFDGWEISFIPKDNDGG MTAQLPSTITSFVQSGLRPGEEYTVNLVALRDQGRSQPFTATVTTLIDGPTLLIVRDVSD TVAFVEWTPPKAKIDQIVLRYGLVGGEGPRTTFRLQPTLSQYSLQVLRPGSRYEVSVSGV RKGNESGSISTEFTTEIDAPKNLRLLSKTSTTLELEWDNSEAEVEGYQVVYSTLAGDLYD KVIVPRNEGATTKTSLTDLLPGTEYGIGISAMKGSNQSTPATMNARTGLDVPMDLTVMAS TDNTITLVWGVVQGPIDHYKVTYTSSSGVTAELNVPKDVTTTTLIDLEPGTEYTITVAAR RGRQQSTAATIDAFTGMDPPKELTVSDVTEDAVTISWIKPLAPFEYYKLSYQSARGRVDS VVIDSDVTNYTLSSLFPATEYEISLNAVRGSQESKVVTTSVFTAMDMPAELTALNITPQG TLLRWNPPVSSVDNYVLTLTHNQVTADTFLVEGNKQEHQLSNLKPSTTYSVALYATKGPL TSGTVITNLQTPMDAPLNLTASEVNHRSALISWQPPIAEIDNYMLTYKSADGSRKELILD SEDTWIRLEGLAETTEYTVNLQAARGLDTSAVVSTTFTTGSRLFATPQNCAQHLLNGETL SGVYTIYINRDPSQGVQVYCDMATDEGGWIIFQRRQNGLTDFSRKWSDYRVGFGNLEDEF WLGLDNIQRIAAQGRYELRIDMKDGQESVYANYDKFSIGDAKNLYKLRIGEYNGTAGDSL SYHQGRPFSTKDRDNDIAVTNCASSYKGAWWYKNCHRANLNGKYGESRHSQGINWYHWKG HEFSIPFVEMKMRPFNFRSISSKRRRSAPV NT seq 3873 nt NT seq  +upstreamnt  +downstreamnt atgccactggcacagcatcacagggccactgtgcccacagcgatctggatccttgctttt gctctgaatcttgctctacagggcgccgttcatgctgctccatcaggagacaacaagctg gttcgtaccaccagagtgaggcgacagaccccagggggggatcaacccccctccgcttcc tcagccaacgagaccctgcgggagcaacccgtggtctttaaccacatctacaacatcaat gtacccttggagtctctgtgctctgtcgacctggacgcctccgcaccacctgccacagga gatggttctcgtgctgagttgggatccagaccttctgtggagggaccgatggatcccagt ggaccaacagaatacatggagcagacgctggatgcagacagccaggttacattcactcac cgcatcaacatcccaaaagcagcatgtggctgtccgtcaaccaccacaatccagcaactt gccaccagggttgagatgctggagagagaagtttccctgctcagagctcagtgtgggtct ggatgctgcggggagagctcagccatgggtcatttggactttgtcccaggctgcagtggc catggcagcttcagttttgacctttgcggctgcatctgtgaggaaggttgggccggcaaa aattgctccgagcctcgctgcccggacgactgctccggccagggtgtctgcgtggaaggg gagtgtgtgtgtgaccgtgactttggtggcgacaactgctcggagccgcggtgcccctcg gactgctcgggtcgcgggctctgtatcgacggggagtgtgtgtgcgaagagtccttcacc ggcgaggactgcatggtcgggaggtgtctcaacgactgctcggaccagggcatgtgcatc aacgggacgtgccagtgcaggcccggctacgtgggagaggactgctcgctggtctactgc gccaacaactgtagcaagaagggcgtctgcaaggagggattctgtatctgccaggatggc tttgctggagatgactgcaactctgtggcaccggccatgaatgtgaagatacgaggcgtg actgactgcacagttgacgtggagtgggaggggtctgttgtgctgacagattttttagtg acctacacaccgagcagccctggaggtgtgcaactagaggtgaggattccaggcaatacc accacctacaccatctcaggcctggaggcaggcatggagtacaacatcaacgtgttcgct gtcattaacaacagcatcagcgtccctgccagcatcaccgtgtcgacctatctctccaat ccggatggtttagtcttcaaattcatcacagagacgtcagtggaggtccagtggttgccc ttctactattccttcgatggatgggagatcagcttcatccccaaggacaatgacggaggg atgactgcacagctgcccagcaccatcacttcctttgttcagagtggtttgagaccaggg gaggagtatactgttaacctggtggcgctccgagaccagggacggagtcagccattcact gctactgtcacaacattgattgatggacccactctgctgattgtgcgggatgtgtcagac accgtagcgtttgtagagtggacaccgccaaaagcaaagattgatcagattgtgttacgt tatggcctggtgggaggagagggtccccggactaccttccgcctccaacccacgctcagc cagtactccctgcaggttctgcgtcccggctcacgttacgaggtgtccgtgagcggagtg agaaaaggaaatgagagcggctctatttccactgaatttactaccgagatcgatgccccc aagaacctgcggctcctgtccaagacctcaaccactctggagctcgaatgggacaacagt gaggcggaggtggagggctaccaggtggtgtacagcactttagcaggagacctgtatgat aaagtcattgtaccacgcaatgagggtgccaccactaagacctccctcacagacctgctg ccaggcacagagtacggcatcggcatttctgccatgaaaggtagcaaccagagtacccca gcaacaatgaacgccaggacgggtctggatgtgcccatggatctaactgtgatggcttcg acagacaacaccatcactctggtgtggggcgtggtccagggccccatcgaccattacaag gtcacctacacatcctcctctggcgtcaccgctgagctgaatgtgcctaaagatgtaacc accaccactctgatcgaccttgagcccggcactgagtacaccatcactgtggcagcaaga cgaggaaggcagcagagcaccgcagctaccatagatgcgttcacaggcatggacccacca aaagagctgacggtgtcagatgtgacggaagacgcagtgactatctcttggatcaaacca ctggctccatttgaatactataagctgtcctaccaatcagccagaggtcgagtggacagc gtggtgattgacagtgatgtgaccaactacaccttgtccagcctgtttcctgctacagaa tacgagatcagcctcaacgctgtcagagggagccaggagagcaaagtggtcaccacctcc gtcttcacagccatggacatgccagctgaattgacagctctcaacatcactccacaagga accctgctgaggtggaatcctcctgtttccagcgtggacaactacgtgctgaccctcaca cacaaccaggtgacagctgataccttccttgtggagggaaacaagcaggagcaccagctg tccaacctgaagccaagcaccacctactccgtagccctctacgccaccaaaggaccccta accagtggcaccgtcatcaccaacctccaaacacccatggatgcgcccttgaacctaaca gccagtgaagtgaaccatcgcagtgctctcatctcctggcaaccgccaatcgcagaaatt gacaactacatgctcacctacaagtcagcggacggcagtcgtaaagagctgatcctggat tcagaggacacatggattcggctggagggactggcagagaccacagagtacactgtcaat ctgcaggctgcaagaggacttgacaccagcgctgtagtctccactaccttcactacaggg agtcgtctgtttgcaacacctcagaattgtgcccaacacctgctgaatggagagacgctg agcggcgtctacaccatttacatcaacagagacccgagccagggtgtgcaggtgtattgt gacatggccactgatgaaggaggctggattatatttcagcgacgtcagaacggcctcaca gacttttccaggaagtggagtgactatcgggtcggctttggaaacctggaggatgaattc tggcttggtctagacaacatccagaggattgctgctcagggccgttacgagctgagaatt gacatgaaggacggacaagagtcagtctacgccaattatgacaaattctccattggagat gcaaaaaatctctacaagctcaggataggagagtacaatggcactgctggtgactctctg agctaccaccaaggccggcccttctctacaaaagacagagacaacgacatcgctgtcact aactgtgcctcgtcttacaaaggagcgtggtggtacaagaactgccaccgggcaaacctc aacggcaaatacggcgagtccagacacagtcaggggataaactggtaccactggaaaggc cacgaattctctattccttttgtggagatgaagatgaggccattcaacttccgtagcatc agcagcaagaggaggcggtctgcccctgtataa

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