Anoplopoma fimbria (sablefish): 129115154
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Entry
129115154 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129115154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129115154
03041 Spliceosome [BR:
afb03041
]
129115154
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129115154
Spliceosome [BR:
afb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129115154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
OVT1
Terpene_synth_C
Zw10_N
Suppressor_APC
DASH_Dad2
Peptidase_S10
OSTMP1
Peptidase_S46
COG6_N
V_ATPase_I
CENPH
Motif
Other DBs
NCBI-GeneID:
129115154
NCBI-ProteinID:
XP_054482822
LinkDB
All DBs
Position
Unknown
AA seq
203 aa
AA seq
DB search
MGAVTDDEVIRKRLLIDGDGAGDDRRINVLLKSFTKWCNSPGTPEEGFTQYQRMMGILAQ
CEFSMGKTLMVYDMNLREMENYEKIYTNIEQNITSAHDKIAECXKEIQRAKRIRKNRQEY
DALAKVIQQHPDRHETLKQLEALDKELQQLSHIKENVDAKLELRKKQFHVLLSTIQELQQ
TLENDEKSDNDENSQESPAQNGE
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgttacagatgatgaagttattcggaaacgtcttctcatcgacggggacgga
gctggagatgaccgccggatcaacgtgttgctaaagagtttcaccaaatggtgcaactcg
cctgggaccccggaggaagggttcacgcagtatcagaggatgatggggatactggcccaa
tgtgaattctccatggggaagacattaatggtttatgacatgaatcttcgagaaatggag
aattatgagaaaatctacactaatatagaacaaaacatcacgtctgcacacgacaagata
gcagaatgcnaaaaagaaatccagagggcaaagagaatacggaaaaatcgccaagagtac
gatgctttagctaaggttatccagcaacacccagaccgacatgaaacactaaagcagttg
gaggcgcttgacaaagaactccagcaattgtctcacatcaaggagaatgtagatgcaaag
ctggagctgaggaagaagcagttccatgtgctactcagtaccatacaggaactacagcag
acactcgagaatgatgagaaatcggacaatgacgagaacagtcaggaaagcccagcacag
aatggtgaatga
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