Anoplopoma fimbria (sablefish): 129115337
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Entry
129115337 CDS
T09102
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129115337 (zeb1a)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
129115337 (zeb1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-C2H2_6
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
129115337
NCBI-ProteinID:
XP_054482875
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All DBs
Position
3:complement(4634099..4699451)
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AA seq
1125 aa
AA seq
DB search
MADGPRCKRRKQANPKRSSVTDFNNGLEASSDSDDEDKLHIVEEDSLQEPEVANADGTKT
QESHDATTTTTTTVLPHNGSLNGVKEEYVSEEEEEAEKDTLVDEILQQGDTAVIYPEAPE
DEQSPAETGGADENGTPDSFSQLHTCPYCSRGYKRNASLKEHIKYRHETSEDNYSCTHCS
YTFTYRSQLERHMSHHRGNREQRHVSQSTGGSGGTGGTRKFKCTECSKAFKYKHHLKEHL
RIHSGEKPYECSNCKKRFSHSGSYSSHISSKKCVGAAPPNGVPRTTIKSPPPTTPTTPVV
IAPARMILKEKTESKPLQEQLPVTQIKSEPVEYECKPVVAAPATSAGGNGVVNGGTAQPS
PSTTLPQGVAMVVPTVGLMSPISINLSDLQNVLKVAMDGNVLRQVLGTANGMGKQGIVVQ
QASQQIISLPAFVDHDGTTKIIINYSISPAAATTATTQTAALVAKTSPAPLPTVTTAAAP
TPTKTDKPSTPGVTGLSIVKEEPESVAITDMKTEAATQKEITAQMPKVTSTCLLCDDCPD
NLEALHLLQHRKAANGEAVDSAALDPSFAALLSEAGVTLEEPPVDDLLSLLKTYFASNAN
PSEEELTKISETVSIHVDVVRKWFAKMNYGKNVGKYRTKATEVSTKTETTNSSSEDASNQ
NGVAEEDSSQETSNKASSESGSASPSDSSPLSLNTGDLVIVKSEPEDPEAPDSQAEPLDL
SLPKHIAAALETTTPPAKQQEQPLNLTCLRKEQLEGRTIYVTTPQTGRPVSIVTAAQLPT
LVAISSQGTISCLNAINTTTKRTILIPQLTYTYATTAGSATGAKTVVLNGHKQEKRLDSS
SDGVSTVEQQNAAILKKRRLENGRYQCDLCSKVFQKGSSLLRHKYEHTGKRPHECNICKK
AFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKDGPNSGPDSGP
REAQSELGSPGAGLQSDSRTTTPPSQLDSDERESEEEEDEDDEAMCMDDIRVVQVDDGEC
EIYEGNFEDDDDEEGEEITEEETTGEEEAEGEKMDEEVVCDVMEIEVGEDHMEDEEMEET
EEEKKEATSADTEEMPDCEANTDKSVREESDSAEPTEEVVTTNAK
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaagaggagcagcgtg
acagacttcaacaatggcttggaggccagttcggactctgatgacgaggacaagctacac
atcgtggaggaggacagcctgcaggagcctgaggtcgccaacgccgacgggaccaaaacg
caggagagccatgacgccaccaccaccaccacaacaacagtattaccccacaacggctcc
ttgaatggagtgaaggaggagtatgtgtcagaagaggaagaggaggctgagaaggatact
ctagtggatgagattctccagcagggagacacggccgtcatctatcctgaagccccggag
gatgagcagagtccagcagagacgggaggcgctgatgaaaacggcaccccggactccttc
tcccagttgcacacctgcccctactgctcccggggctacaagcgcaacgcctcgctgaag
gagcacatcaagtatcgccacgagaccagcgaggacaactacagctgcacgcactgcagc
tacaccttcacctaccgctcgcagctggagaggcacatgagccaccacaggggcaacagg
gagcagcgtcacgtttcccagtcgacaggtggatcaggaggaacaggtggaacccgcaag
ttcaagtgtaccgaatgttccaaggccttcaagtacaagcaccacctgaaggagcacctg
cgcattcacagcggtgagaaaccatacgagtgctcaaactgcaagaagcgattctcccac
tccggctcctacagctcccacatcagcagtaagaagtgcgtgggtgcagctcctcccaat
ggcgtccctcgaacgacgatcaaatcccccccacccaccaccccgaccacaccggttgta
atcgctccggcgcggatgattcttaaagagaagactgaaagcaaacccctccaggagcag
ctccccgtcacccagatcaaatctgaacctgtggaatacgagtgcaagcctgtggtggcg
gcaccggcaacttcagccggcggcaacggcgtagtgaacggagggacggcacagccatct
ccgtctacaaccctccctcagggtgtggctatggtcgtaccaacggtcggcctcatgtcg
cccatcagcatcaatctgagcgacttgcagaatgtgctcaaggtggcgatggatggaaat
gtgctcaggcaggtgctgggtacagctaacgggatggggaagcagggaattgtagtccag
caggcctcgcagcagatcatcagcctgccggcctttgtggatcacgacggcaccacaaag
atcatcatcaactacagcatcagccctgcagccgccaccactgccactacccagactgct
gcgcttgttgccaaaaccagtcctgctcctcttcccaccgtcaccactgctgcagccccg
acccccaccaagacagacaaaccctcaaccccaggggtgaccggcctctctattgttaag
gaagagccagaatcagtggccatcacagacatgaaaacagaggcagccacacagaaagaa
ataacagctcagatgccaaaagtcaccagtacatgtttactatgcgatgactgtcccgac
aacctggaggcgttacacctcctccagcaccgcaaagcagccaatggggaggctgttgac
tctgcagctctggacccctcgttcgctgctctgcttagcgaggcgggggtgacgctggag
gagccccccgtggacgacctcctctcactcctcaagacctacttcgcctccaatgccaac
cccagcgaggaggagctgacaaagatctcagagaccgtcagtattcatgtggatgtggtc
agaaagtggtttgcaaagatgaactatgggaaaaatgtgggcaaataccgcacaaaagcc
acagaggtttctacaaagactgaaaccacaaattccagctcagaggacgcctcaaatcag
aacggggtagcagaggaagacagttcccaagaaacctccaacaaagcctcatcagaatct
ggcagcgcttccccgtcagactcttcaccactaagcctcaacaccggggacctcgtcatc
gttaagagcgagccagaagacccggaagcaccggactctcaggccgagcccctggacctc
tcccttcctaaacatatcgcagcggcattggaaacgaccacgcctcccgccaagcagcag
gaacagcccctgaacctgacctgcctgaggaaggagcagctggagggtcggaccatctac
gtcaccacgcctcagaccggacgacctgttagcatcgtcactgccgcacagctgcccacg
ttagtggccatctccagtcagggcacgattagctgtctcaacgccatcaacaccacgacg
aaacgcaccatcctcatcccccagctcacgtacacctacgccacgacggccggcagcgcc
actggagcaaagactgtcgtgctgaacggccataagcaggagaagaggctggacagcagc
tccgacggcgtctccacagtggagcagcagaatgccgcaattctgaagaaacgacggctg
gaaaacggccgctaccagtgtgacctttgctccaaagtcttccagaagggcagctctctg
ctaaggcacaaatatgaacacacgggaaaacgaccccacgagtgcaacatctgcaagaag
gccttcaaacacaaacaccacctgatcgaacactcgaggctgcactccggtgagaaaccc
taccagtgcgacaagtgcgggaagcggttctctcactctggctcgtactcccagcacatg
aaccaccgctactcctactgcaagaaggacgggcccaactcgggccctgattcggggcca
cgcgaggctcagtcggagctcggcagccccggcgccggactgcagtcggacagccggacc
acgaccccgccctcccaactggactcagacgagagggagagcgaggaagaggaggacgag
gacgatgaggccatgtgtatggacgacatccgggtcgtgcaggtggacgacggcgagtgc
gagatctacgagggtaactttgaggatgacgacgacgaggagggagaggagatcacggag
gaagagacgacgggagaggaggaggcggagggggagaagatggacgaggaggtcgtttgt
gacgtgatggagatcgaggtgggggaggatcacatggaagacgaggagatggaggaaacg
gaggaagaaaagaaggaagcgacaagtgcggatacagaggaaatgccagactgtgaagca
aatacggacaaaagcgtcagggaagagtcagacagcgccgaacccacggaggaagtggtg
acaacaaacgccaaataa
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