Anoplopoma fimbria (sablefish): 129115391
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Entry
129115391 CDS
T09102
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04020
Calcium signaling pathway
afb04148
Efferocytosis
afb04218
Cellular senescence
afb04310
Wnt signaling pathway
afb04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129115391 (nfatc4)
04020 Calcium signaling pathway
129115391 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129115391 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
129115391 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
129115391 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129115391 (nfatc4)
Transcription factors [BR:
afb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
129115391 (nfatc4)
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GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
129115391
NCBI-ProteinID:
XP_054482899
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All DBs
Position
3:5686921..5700012
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AA seq
897 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPLPRQNQGPSPVRIAEPESSIPGEERECALLHLESSS
SPSLVTDNHHSISIPSPPPSANQRAGMHSPPPRRAPAREFSGTYESLPARSVQVSESRVV
ECPSIQITTISPEDDLAPTISSYWDMGGGGGWDRERLYLPLLDPFTYRDRCPGSLSPSPS
PGSSPSSRGWLSPASSCDSLLVEEEELNEATINFGLSPSSRPTSPGGKKRRNSPLVSPCT
SRRGSYSEDLQGCNFEGGDSTPQSQAPPSSCELSIPQKTRKTSLEQLSSREVDQEQAPGH
SSPCQLTETQQTRREPPSLGMDYLSVPPALAWGRTRASAHSPLFRSNALPPLDWPLPSQF
DQYELRIEVQPRPHHRAHYETEGSRGAVKATPSGHPVVKLCGYTERKPLSLQVFVGTADD
RSIRPHPFYQIHRVTGKMVGTASHESVQVGTKILDIPLNPENNMTALIDCAGILKLRNSD
IELRKGETDVGRKNTRVRMVFRTHLPLAPPLAPPGRVLALQVASLAIECSQRSAQELPVI
ESVSLTSCSVEGGEELLLSGSNFLPMSRVLFMERGTDGKLQWEEEAHVDRDNSNEGLLCV
RVPAYSDLSVSRPMSVSLYVSNGKRKRSSTHCFKYLPIMFKEEDPLLSRPSVLPLDGGTV
CPVGGQPRMDGGFHVRGDPMADDRGLGFHLPPYPSTYSPPCPTMGYHEEYCSKPDAAVEE
PRAALSEGHPSFENLELGFTELLPPLYPRGPQPPSPSPSPWLDSPYLSSSPSPSHSSSLS
PFPAGSPISTSPLPPIPTSPYPQYSAYPQEACPSPPSNPSTYQDMCTAPYSHYEGWDPQG
RVLGMGHGGDSDAKIHECPLEFTSSSMHHITFEEVTEYIGEDIQSFQSASQMDNQPN
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggctccggctgggaggagggagagttcgagttcaagttggtgttt
gaggaggacccgcttccccggcagaaccaggggccatcaccggtgcgcatagctgagccg
gagagctccattcccggggaggagagggagtgcgcactgctccacctggagtcctccagc
agccccagcttggttacagataaccaccactcaatcagcatccccagcccgccgccatcg
gccaatcagcgagcagggatgcattccccgcctccacggagggcccctgccagagagttc
agtgggacctatgagagcctgccggcacgctctgtacaggtttcagagtctcgtgtggtc
gagtgtccaagcatccagataaccaccatctcccctgaagacgacctagcaccaaccatc
tccagttactgggacatgggcggcgggggtggatgggaccgagagcgcctctacctccca
ctgttggaccccttcacctaccgcgacagatgccccggctccctcagccccagcccaagt
cccggctccagcccttcctcccgcggctggcttagccccgcctccagctgtgactccctg
ctggtggaggaggaggagctgaacgaggccacgatcaatttcgggctctcgccatcctcg
aggcccacttcccctgggggtaaaaaacgtaggaactcccccctggtctccccatgtact
tcacggaggggcagttactcggaagacctgcagggatgtaacttcgagggtggagactcc
acccctcagtcacaagctccgcccagcagctgtgagctcagcatcccacagaaaaccagg
aagacgtcattggaacagttatcatccagggaggtggatcaggagcaggctccaggccac
agctccccctgccagctgacagagacccagcagaccaggagagagcctccttcgctgggc
atggactacctctctgtgccccctgctctggcctggggccggactcgagccagcgcccac
agccctctgttcaggtctaatgcccttccaccactcgactggccgctgccgtcccagttt
gaccagtacgagctgcgtattgaggtgcagccccgtccacaccacagagcccactatgag
acagaggggagcagaggagctgtcaaggccacaccatcaggacatcctgtcgtcaagctg
tgtggatacacagagaggaagccgctctcccttcaagtgttcgtcggaacagctgacgac
cgatcaatcaggccacatcctttctatcagatacacagggtgacagggaagatggttggt
actgccagtcatgagagtgtccaggtggggaccaaaatacttgacatccctctcaaccct
gagaacaacatgactgcactcatcgactgtgctggcattctgaagctgaggaactcggac
attgagctgaggaaaggagaaacagacgttgggaggaagaacacacgtgtccgtatggtg
tttcgtacccaccttcctctagcgccccctctagcccctcccggtcgagtcctggctctg
caggtggcctccttggccatcgaatgctcccagcgttcggctcaggagctgcccgtcatc
gagtccgtcagtcttacctcctgctccgtggagggaggagaggagcttctgctgagcggc
tctaacttcctgccaatgtccagggtgcttttcatggagcgagggacagatggtaaattg
cagtgggaggaggaggctcatgttgaccgtgacaacagcaatgagggtttgttgtgcgtg
agggtcccggcctacagcgacctgtccgtcagtcggccgatgtcggttagtctttacgtc
tccaacgggaagaggaaaagaagcagcactcactgcttcaagtatctccccattatgttc
aaagaggaggacccgctgctctcccggccctctgtgctgcctctggatgggggtaccgtg
tgtcctgtggggggtcaacccaggatggacgggggtttccacgtgagaggcgaccccatg
gctgacgatcgaggcctgggcttccacctgcccccttacccctccacctactcccctccc
tgccccactatggggtaccacgaggagtactgctccaaacccgatgctgcggtggaggag
cccagggcggctctgtcagagggtcaccccagctttgagaacctggagctgggcttcacc
gagctcctacctcccttatacccccgcggcccgcagcctccctccccctccccttccccg
tggctggactcaccctacctctcctcctcgccctctccctcccactcctcctctctcagc
ccgtttcctgccggcagccccatctcgacctcccctctgcctcccatccccacctcccct
tacccccagtactctgcttatcctcaggaggcgtgtccctcacctccctccaaccccagc
acgtatcaggacatgtgcactgcaccctactcccactacgagggctgggacccccaggga
agggtgctggggatgggacacgggggagatagtgacgccaagatccatgagtgccccctg
gagtttaccagctcttctatgcaccacataacatttgaagaagtgacggagtatatcggg
gaggacatccagtctttccagtcggcctcacagatggacaaccagccaaactga
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