Anoplopoma fimbria (sablefish): 129115404
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Entry
129115404 CDS
T09102
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129115404
04121 Ubiquitin system [BR:
afb04121
]
129115404
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
129115404
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
129115404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
129115404
NCBI-ProteinID:
XP_054482900
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MVPFSTVQKPSFKSLLEKFDRQYELPGKTYFSETAVPKMYNSVRASVQSELRSVDFFSAT
TDMWSSVNMTPYMSLTVHYLTTDWTLKSRCLETVFMPLNHTSDNIAEALRSAFDEWSLDE
KKLACVTTDNGANIVAAVRQLGWTWLNCFGHNLHLAVTNAMASVKDRTSRAMGQCHTLVG
AFSQSWLKRRDLAKAQAELQTPQHVLIMDCPTRWGSKQKMVDRVLEQIPAIKRVLDDRRH
QHLIPSWQDIAVLESVNAALKPAADFTDLLSGENYVTVSSIKPVLKLLTEDVLKPSDEDT
TLTSDIKRKMCSVLEEKYRPAALQATLAKSCLLDPRYRGNNFDEYAEEETKCALINEMLD
TEDRESGASASAADQPESLAQTAVPPPTKKRTLGDLLKSRTSTSATVPKRARADLELTRY
LQEEPIDSNDNPWHGGATTRRDFPCSPKWHAMSKKRAKLALGTIMSQVLAAQDVGYVGSA
DVLLLEAGSLGAEAGAEEGDEVAVGEVLTR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggtgccgttttccactgtacagaaaccttctttcaagtcactgctcgagaaatttgat
aggcaatatgagttgccaggaaaaacctacttctcagaaactgctgtgcctaaaatgtac
aattcagtaagagcatcagttcagagtgagctcagaagtgtggactttttctctgccacc
actgacatgtggtcaagtgtgaacatgactccttacatgagtcttactgttcattacctg
accacagactggactctaaaatcacgctgcctcgaaacagtgtttatgcccctgaatcac
acatctgacaacatcgcagaggctctacgcagcgcatttgatgagtggtccctggatgag
aagaagctggcgtgcgtaacgacagataacggggcaaacatcgtggcagcagtgagacaa
ttgggctggacgtggctgaactgcttcggacacaatctacacttggcagtgacaaacgca
atggcaagcgttaaagatcgcacatcgcgagcaatgggccagtgccacaccttagtgggt
gcgttctcccagagctggctgaagaggagggatctggcgaaagcgcaagcggagcttcaa
accccgcagcacgtactcataatggactgtccaacaagatggggctccaaacaaaaaatg
gtggaccgagtcttggagcaaatccccgccataaaacgagttttggatgatcggcggcat
cagcatctcatccccagctggcaggacattgcagttttggagtcggtgaacgcggcgtta
aagccagcggctgattttacggatctgctgtctggcgagaactacgtcacggtctcatca
attaaacctgtcctgaaactcctcacggaagatgtcttaaaaccatcagacgaggacacc
actctgacctcagacatcaagcggaagatgtgcagtgttctcgaggagaagtacagacca
gctgctctacaagcaactttggcaaagtcctgcttgctggacccaagatatcggggcaac
aattttgatgagtatgcggaggaggagacaaagtgcgcgctgatcaatgaaatgttggac
acggaagacagagagagcggtgccagtgcgtcagctgctgaccagccagagtccttggcg
cagacagcggtgccaccacccaccaaaaaaagaacgctcggagacctgctgaagtcacgg
acaagcacgtctgcaaccgtcccgaagagagccagagccgacctggagctcactcgctac
ctgcaggaggaacccatcgactctaatgacaacccctggcatggtggtgcaacaaccagg
agagatttcccttgctctccaaagtggcacgcaatgtccaagaagagagccaagctggct
ctggggacgattatgtcccaggtcctagcagcacaggacgtgggatatgtagggtcagcg
gacgtcctgctgctagaggcaggcagcctaggggcagaggcaggggcagaggaaggggac
gaggtcgcggtcggagaggtcttgacacgatag
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