Anoplopoma fimbria (sablefish): 129115955
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Entry
129115955 CDS
T09102
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129115955 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afb03400
]
129115955 (rad54l)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
129115955 (rad54l)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
SWI2_SNF2
Zn_ribbon_InsA
Motif
Other DBs
NCBI-GeneID:
129115955
NCBI-ProteinID:
XP_054483085
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Position
3:9901322..9913785
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AA seq
740 aa
AA seq
DB search
MRRSLAPSQVAKRKQPGDSCEDEDWTYRTEKKRKGDKERRESHISPFRKPLTQLNKPPPC
MDGDKHEAFIRSILSKPFKIPIPNYTGPLGIRALGLKRAGVRKALHDPFLEDALVLYEPP
TLSAHDLIKAEKEKLPVHVVVDPVLGKVLRPHQREGVKFLWDCVTGRRISDSYGCIMADE
MGLGKTLQCIALMWTLLRQSPDAKPEIDKVIVVSPSSLVRNWYNEVAKWLGGRVSPVAID
GGSKDEIDRKLVNFMSQHGLRVPTPILIISYETFRLHAGVLHKGKVGLVICDEGHRLKNS
DNQTYQALNAMSAKRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKG
RDADASDKDRETGEGKLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQLELY
KHFLRQAKPIETLQEGKISVSSLSSITSLKKLCNHPALIHEKCVENAEGFEGALDLFPPG
YCTKAVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRSRRYLYVRLD
GTMSIKKRAKIVERFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM
ARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELREL
FTLNEETASDTHDRFRCRRCVNGREVRPPAEESDCTSNLSQWNHCYDKKGLRDQVLKASW
DAAVSFVFHQRSHEDQKGVV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggagtcttgcacccagtcaggttgccaaacggaagcaaccaggagattcctgt
gaagatgaggactggacatatagaactgagaaaaaaagaaaaggtgataaagagaggaga
gaaagccatatttctcccttcagaaagcctctgacacagctgaacaagccgcccccttgt
atggatggtgacaaacatgaggcgtttattcgaagtatcctctccaaaccatttaaaatt
cctattcctaattacacaggcccactgggcatcagggcactcggtctgaagcgtgcaggc
gtgaggaaagcacttcacgatcccttcttagaagacgctttggtcctttatgagcccccg
actctgagcgctcacgacctgatcaaagctgaaaaagaaaaactaccagtccacgttgtt
gtggatccagttttaggaaaagtgctcagaccccatcagagagagggggtgaagttcctg
tgggactgtgtgacgggaagacgcatctccgactcgtacggctgcatcatggctgacgag
atgggcctggggaagaccttgcagtgcatcgccctcatgtggaccctgctgcgccaaagc
ccggacgccaagccggagatagacaaggtcattgtggtttccccttccagtctggttcgg
aactggtacaatgaagtagcgaagtggctgggaggacgcgtctcaccggtggccatcgac
ggaggttcaaaggatgagatcgacagaaaactagtgaacttcatgtctcagcatggtttg
agagtaccaaccccgatcctgataatttcatatgagacgtttcggcttcacgccggggtt
ctgcacaagggcaaagtcggactagtaatctgcgacgagggtcatcggctgaagaactcc
gacaaccagacatatcaggcccttaatgccatgagtgccaagaggagagtgctgatatcg
ggcactccaatccagaacgacctgctggagtatttcagcctggtccactttgttaatgct
gggatccttggtacggctcaggagtttaaaaagcggtttgagcttcccatcctcaagggt
cgagatgcagatgctagtgataaagacagagagaccggagaggggaaactcaaggagctg
atcagcatcgtcaacaggtgcttgataaggagaacatctgatatcctgtccaaatatctt
cctgtgaaaatcgagcaggtcgtatgttgcaggctgactcctctacagttagagctttat
aagcacttcctgcggcaggcgaaacccattgagacattacaagagggaaaaataagtgtc
tcctccctgtcctccatcacatcactcaagaaactgtgcaatcacccggctctcatccat
gagaagtgcgtggagaacgcggagggctttgaaggggcgctggatctgttcccacctggt
tactgcactaaggctgtggagcctcagctctctgggaaaatgctggttcttgactacatt
ctggcaatgacaagaactacaactagtgacaaggtggtgcttgtctccaactacactcaa
acactggacctctttgaaaagctgtgcagatctagaagatacctctatgttcgtctggat
ggcacaatgtccatcaagaaaagggccaagattgttgaaagattcaacagtccatctaat
ccagagttcatcttcatgctgagcagcaaggctggtggatgtggcctgaatctgatcggt
gctaatcgccttgtcatgtttgatccggactggaaccctgccaatgatgagcaggcgatg
gcacgggtttggagagacggccagaagaagacctgctacatctacagactgctctctacc
gggacgatcgaggagaagatcctccagaggcaggcccacaagaaagccctgagcagctgc
gtggtggacgaggagcaggacgtggagcgtcacttctccctgggcgaactccgagaactc
ttcaccctcaacgaggagaccgccagcgacacgcatgaccggtttcgctgtcgccgctgt
gtgaacggcagggaggtccggccccctgcagaagaatccgactgtaccagcaacctctcc
cagtggaaccactgctacgacaagaagggtctgagggaccaagtgctgaaggcctcctgg
gacgctgctgtctccttcgtcttccaccagcgctctcacgaggatcagaagggtgttgta
tag
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