Anoplopoma fimbria (sablefish): 129116209
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Entry
129116209 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: neurabin-1-like
KO
K17551
neurabin
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afb01009
]
129116209
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129116209
Protein phosphatases and associated proteins [BR:
afb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129116209
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129116209
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ_5
PDZ
SAM_2
SAM_1
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129116209
NCBI-ProteinID:
XP_054483189
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All DBs
Position
3:complement(23890172..23900029)
Genome browser
AA seq
1306 aa
AA seq
DB search
MMRTDSKGRSASPHRITYKSDFHAIKCSFDTATSQQPGTKTVSAQHSAVPPTMLPSSLSD
PIISHTSTIASTGSRGRVLSTRGTKIRDNIFLQMDNQQLKKDGGPVQSSGSTPHLTPPTL
QLQTSTLSVSRRSVISSSSVLGTAANISSTESSLQDKSSRSEEIVDIDRAALAQKFSVTR
RLFETKVMEVGGGGGQVSKSIAGSGSMGTADGKGEEEEMEKEEDDSGKSNNTEDDSFDKD
KSINPPFINIPLPKSTAQASLTTHHKSPVSDGPSESSNRSPSYLDKHGETMGAQTEEERT
ASASCDLFLTPEVPLRAELVDVKNGSSESDENEEEKEQNEEKHCLKHEXGKYRDNVAAET
VQQLVDDVFEEHSMKTSGPYVLENGVELRTGEGRPVVPSEEHQKELSASMSWKRETKDDS
KGGRDKYQQVNEEWEGEREGQDRQFLAEKSTEKTVAGVGESAHRAERGIKQEEDDDKQVK
TYSQDKERTENEEGSTSELQEEVKHEECREGSDGKDDKGGGKEDQTGAAVIAGIENKAFV
YAQESHSHPEHLRQEWENSKHDNRLLLQYEEIPGLPELDDQEEEEDVEDAAEDQQKRKVR
FTSAPIKVYSTYSNAEYDRRNEDIDPVSASAEFELEKRVDRMDVFPVDIGKGEEGLGISI
IGMGVGADQGLEKLGIFVKTVTEGGATQKDGRIQVNDQIVEVDGVSLVGVSQLFAATVLK
NTSGLVKFLIGREKEGVESEVERLINESLEMDRAPRERGRASGDEDNDGSFSEKSVEEEE
DEEDDVSVISSLDNYQLCLKYQQLQSKLRSKAVQLHHAREKLKAWEEEQVHWESHKIELE
ERVEDGEEKAEKLEKYWQEAQTLCRVVSQRLADAQSQSESIEIKYSKAKRLIREYHNREE
ESEKREADLRGEMVEREKLHRETVERLQIQIAQLEGKEAAPERKNHSVDTSVTDPDWSIP
VPDTGLLDSSAHKARAQLAQKSKRHPPSRDKLRESFRRQEFEVQKPQESQPLSAPTAMQR
GSRSDVSSTSSFSALSPQPPNISVFTPPIYITDTVTPSPCKSSASRKSKKKFPDFSGLRK
SLSKRRSEKHCKRAMNNRGSYGDLVDEPAEVSPSGSITSMPSCLPFPWFGERVREKAVDS
ERGRERLRSVSSSSLPYLTTTGRRDQTLDNEPVPSNNNNQWQSRPVMEWDNQQVCLWLIA
MNMDEYASEFAARGVDGTQLLNMDSEKLKALGVCNQSDRSALKRKLKEIKKSEEKGQRKG
EKRLEEKNPVLDQEGDDKEKARTLMMEKSLKDARGCRKNLRTESLL
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggacagacagcaaaggccgaagcgcctcacctcacaggataacctataagtct
gacttccatgccatcaaatgttcatttgacactgccactagtcaacaaccaggaaccaaa
actgtctctgcccagcactctgctgtgcccccaaccatgctgccatccagtctgtcagat
cccataatttcccacaccagcaccattgccagcacaggcagcagagggagagtcctcagc
accagggggacaaagatcagagacaacatcttcctacaaatggacaaccagcagctgaaa
aaagatggtggtccagtgcagagttctggctccacaccccaccttactccccccactcta
cagctccaaacttctactttatctgtatccagacgttcagtcatcagctcctcgtccgtc
ctggggactgcggccaacatttcatctacagaatcttctctgcaagacaaatcatccaga
tcagaagagatagtggatattgacagagctgctctggctcagaagttctctgtaacgagg
aggttgtttgagaccaaggtgatggaggttggaggtggtggagggcaggtttcaaaaagt
attgctggcagcggaagcatggggacagcagatgggaaaggagaagaggaagagatggaa
aaagaagaagacgatagtgggaaaagtaataacacagaagatgatagctttgataaagac
aaatccataaacccccccttcataaatattcccttgccaaagtctactgcacaggcctcg
ctgacaactcaccataaatctccagtatcagatggccctagtgaatcatccaacagatct
ccctcctatcttgacaaacatggtgaaaccatgggagcacaaacagaagaagaaaggaca
gcaagcgcatcctgtgacctcttcttgacccctgaggtgccactgagggcagaactagtt
gacgtgaagaacgggtcatcagaaagtgacgagaatgaagaagaaaaggagcaaaacgag
gaaaaacactgtcttaagcatgagnggggaaagtacagggacaacgttgcagcagaaact
gtgcagcagctagttgatgatgtttttgaagagcacagcatgaaaacatctggaccttat
gtgttggaaaacggagttgaactgagaacaggagaaggtagaccagttgtgccctcagag
gaacaccagaaggagttatcagccagcatgtcatggaaaagggagaccaaggatgacagc
aaaggtggaagagacaagtatcagcaggtgaatgaagaatgggagggtgagagggagggg
caggacagacagttcttggctgagaagtcaacagaaaagactgttgcaggagtgggagaa
agtgctcacagggccgagagaggcataaagcaagaggaggacgatgacaagcaagtgaag
acatacagtcaagacaaggaaagaactgagaatgaagaaggttcgacatctgagctgcaa
gaggaggtcaagcatgaggagtgcagagaaggcagtgatggaaaagatgataaaggagga
ggcaaagaggaccagacaggagctgcagtaatcgctgggattgagaacaaggcttttgtg
tatgcacaggaatcccactctcacccagagcatttaagacaggaatgggaaaactctaaa
catgacaatcggctcttattgcaatatgaagaaattcctggtttgcctgaattggacgat
caggaggaggaggaggatgttgaggatgcagcagaggaccagcagaagagaaaggtcagg
ttcacctcagcacccatcaaggtgtacagcacttattcgaatgcagagtacgacagacgc
aatgaagacatcgacccggtgtccgcctcagctgagtttgagctggagaagagagtggac
aggatggatgtctttccagtggacatagggaaaggagaggagggtctaggcattagtata
ataggaatgggtgtaggagctgaccagggactagaaaaactcggaatcttcgtcaagacc
gtcactgaaggaggagcaacacagaaggatggaaggattcaggtaaatgaccagatagtg
gaggtggatggggtgagtttggttggagtctcccagctgtttgcagccacagtcctcaag
aatacgtcaggccttgtcaagtttttgattggcagagagaaggagggagtggagagcgag
gtggaacgactgatcaacgaaagcctggaaatggatagagcacccagagagagaggaaga
gcaagcggggacgaggataacgatggtagcttttcggagaagtcagtggaagaggaggaa
gatgaagaggacgacgtgtctgttatttccagtctggacaattaccagctctgcctcaaa
taccagcagcttcagtcaaaactacgaagcaaagcagtccaacttcaccatgctagagaa
aagttaaaggcatgggaggaggagcaagtccattgggagagccacaagattgagctggag
gaaagagtggaggatggagaggagaaagctgagaaactagagaagtattggcaggaggcc
cagacactgtgcagggttgtgagccagcgactggctgatgcccagagccaatcagaaagc
atcgagatcaaatacagcaaagccaagagactgatcagagaataccacaacagagaggag
gaaagcgagaagagagaagcagatttgagaggagaaatggtggagagagagaagctacac
agagagacagttgaaagactgcaaatccagatagcacagctagagggaaaagaggctgca
cctgagagaaagaaccactctgtggacacttcagtcacagatccagactggtctattcca
gttcctgatacgggacttctagactccagcgctcacaaagccagagctcagctggcgcag
aaatccaagcgccacccgccctctcgagacaaactcagagagagcttcagaagacaggaa
tttgaagttcagaaaccacaggagagccaacccctgtctgctcccacagcgatgcaaagg
ggcagcagaagtgacgtgtccagtacctcgtctttctcagccctcagccctcaacctccc
aacatctccgtcttcactcctcccatctacatcactgacacggtcactccctcaccatgc
aaatcctccgcatccagaaagtccaaaaagaaatttcccgacttcagtggccttcgcaag
tctcttagcaaaaggagaagtgagaaacactgcaaaagggccatgaacaacaggggttcg
tatggtgacctggtggatgagcccgctgaagtatctccgtcaggttcaataacctccatg
ccttcttgcctgcccttcccctggtttggagagcgagtgagagaaaaagcagtggacagt
gagagaggcagggagagacttcggtctgtgtccagcagcagcttaccgtacctgaccaca
acaggtagaagagaccagacattggacaatgaaccagttcccagcaataacaacaaccag
tggcaaagccgacccgtaatggagtgggacaaccagcaggtgtgtctgtggttaattgcc
atgaacatggacgagtacgcgtctgagttcgctgccagaggtgtggatgggacacagctt
ctcaacatggacagtgagaaactcaaggctctgggggtgtgcaatcaaagcgaccggtct
gccctcaagaggaagctgaaggagataaagaaaagcgaggaaaaaggacagaggaaagga
gagaagaggctggaagagaagaacccagttttggatcaggagggtgatgacaaagagaaa
gctaggacgctgatgatggagaagtctttaaaagatgccagaggctgcagaaaaaattta
agaactgagtccctcttataa
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