Anoplopoma fimbria (sablefish): 129116218
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Entry
129116218 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor coactivator 2-like
KO
K11255
nuclear receptor coactivator 2
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129116218
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
129116218
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_NCOA
PAS_11
SRC-1
Nuc_rec_co-act
DUF4927
PAS
Per3-like_PAS-A
HLH
PAS_9
Motif
Other DBs
NCBI-GeneID:
129116218
NCBI-ProteinID:
XP_054483196
LinkDB
All DBs
Position
3:complement(2148505..2185508)
Genome browser
AA seq
1531 aa
AA seq
DB search
MSSGGGNTPEPPRGGESLKRKDCQSDLLLGPSPKRSTERRNREQENKYIEELAELIFANI
NDMDDLNVKPDKCAILKETVKQIRQIKEQEKAPVADAEEVQKADVSSTGPGVIDKDALGP
MMLEALDGFFFVVNMEGNIVFVSENVSQYLRCQQEELMNTSVYSVLHVGDHAEFVKNLLP
KSLVNHRSSDSSNRNSHTFTCRMLVNPHTDGDARSASDQQEAPQQKYETMQCFAVSEPKS
IKEEGEDFQSCLICVARRVPVKERPVLPAYESFTTRQDLQGKITSLDTSLLRASMKPGWE
DLVRRCIQRFHLQNDGEMSFAKKHQQDVLRGGTALSPLYRFSLADGTIVSAHTKSKLVRS
PANNEPQLYMSLHILQRENMSGMTADMAGGQSMTKPMTPTSVSGPSPSPDASVTSNTHHS
NTASSAIGRGFGSVSGRAPKLGSPSAQGSPSVSSGVQGAMLSPRHRQSPSMVASSSSCSS
PHLQHPPGSFSPAAGLHSPASVCSSTGNSQVFNSLSALQALSQGHRVSQGLTEGQHPESP
DGKLFGLQSPLQNSSQQAKNNPSLEADLLGTFGEQQDLLSPNPDGDDEKDGDSSEGNGSS
GELGDAPNATLLNTKGHTKLLQLLTTKSESTDPCSSPPMGDDQNCKDQLGGIGGMGGGAG
HNNHSTSLKEKHKILHRLLQNSTSPVELAKLTAEATGKDPVGPESSSGDSMGELCMKQEP
GSPKKKDNALLRYLLDRDDNGILDKAIKMEPGDGPLLANVKTEMQEGEFDMADQTSELDD
LLEDLQSGGQQQQQQMFSSQQPVRGPASSSSSSSSAAPGSSVEKQSIISDILQMTESSSG
GGVSSPPNQHRAFPPISPAGFNSARPGQPGRGAPPVRIESLDGGVGPNPNAGRPFPPQHR
NNGPYSLLQQQQQQQQQSMMGTHAGMANQAAMANQGMLSNGSMXGSMQQGWGHQGSMGGT
AGGPMMGQGVGPSRMVPNMNAAMTTRGPPGSRAMVGMQMMGNEMEMTNPAYTQQQAPPNQ
TAPWPNRMMAVDHYGNQSRPPYGAPQEDRMRCCGPGPEGPPDEGALLSQLCSVLKDYEGL
EEIDKMLGIPTLAGQGPMSDQDQYLGSSDPSASMKPFLYGQHYGGPPAYGSAPSDGGFHG
PSMSGHMGPQRMTPAGYPPMMRMPGGAGPRPVGIRPGGPGPGVPPQPNNLRLQLQHRLQA
QLNRQPMVNQMSGVSNMNLPLRANVPNQGTLNAQMLAQRQREYLSNHLRQRQHLQQQQQQ
QHVHQQRAMMMRTQGINMPPXGGAAPTPMPVGGTNPRLPQGNPQQFPYPASSYGTGLPSP
PPPPHPGSSSPFSSPLSPGHHLASQGMMGNVGGQYSGVMSPPSQHSAYQFSSSGMTQQQQ
HQDPVSGFPCGAATPQSPLLSPRMGPGQSPMLQQNQGQPQTQPQGPNHRGPPAYQATPGW
SQPANISTSNSVYPQQSQSQYSTQANGGMYNSNNNNMNLGVMANNGGNMNHMSGQMSSMN
TEQVRDGSLILEQLAGMDMLNQDGEPNSNFC
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtggggggggaaacaccccggagccccccagagggggagagtctctgaagagg
aaggactgtcagtcggacctcctgctggggccgagccctaagaggagcacggagaggagg
aaccgggagcaggagaacaagtacatcgaggagctggccgagctgatcttcgccaacatc
aacgacatggacgacctcaacgtcaagccggacaaatgtgccatcctcaaagagacggtg
aagcagatcaggcagatcaaggagcaggaaaaagctccagtggctgacgctgaggaggtg
cagaaggccgacgtctcctccacaggaccgggtgtcattgataaagacgccctcgggccc
atgatgctggaggccctggacggcttcttttttgtggtcaacatggagggcaacatagtg
ttcgtctcggagaacgtcagccagtatttgcgctgccagcaggaggagctgatgaacacc
agcgtctacagcgtgctgcacgtcggagatcacgccgagttcgtcaagaacctcctgccc
aagagcctggtcaaccatcgcagcagtgattcgtccaacaggaacagccacacgttcacc
tgccgcatgctggtcaaccctcacaccgacggtgacgcccggtcggcgtccgaccagcag
gaggcgccgcagcagaagtacgagaccatgcagtgttttgccgtctccgaaccaaagtcc
atcaaggaagagggggaagatttccagtcatgtctcatctgtgtggcgagaagagtcccc
gtcaaagagagacctgtgctgcccgcctacgagagcttcaccacgcgacaggaccttcaa
ggtaagatcacgtctctggacaccagtctgctccgtgcgtccatgaagccgggctgggag
gacctggttcgacgttgcattcagaggtttcacctgcagaatgacggggagatgtccttc
gctaagaaacaccagcaagacgtgctgaggggcggcactgctctcagccctctgtacagg
ttctctctggccgacggcaccatcgtctcagctcacaccaagagcaagctggtccgatct
ccagccaacaacgagccccagctctacatgtccctccacatcctgcagagagagaacatg
agtggcatgactgcagacatggctggcggccagagcatgaccaagccaatgaccccaacc
agtgtgagtggcccctccccttcccctgatgccagtgtaaccagcaacacgcaccactcc
aacacggcctccagtgccatcggacgtggttttggatccgtatcgggtcgggcgcccaag
ctgggcagcccttcggcccagggaagccccagcgtctcatcaggggtccagggcgccatg
ttgtctcctcgccatcgccagagccccagcatggtggccagcagcagcagctgtagtagc
cctcacctgcaacatccccctggttctttctctcccgcagccggactccactcgccagcg
tccgtttgcagcagcacggggaatagccaagtgttcaactcccttagtgcattgcaggcc
ctcagccagggccacagggtttcccagggactcacggaggggcagcatccagagtcacct
gacgggaagctgtttggccttcagagccctcttcaaaacagcagccaacaagccaagaac
aatcccagcttagaggccgacttgttgggaacctttggggagcagcaagacttgttgtcc
ccgaacccggacggagacgatgagaaagacggcgatagctctgaaggtaatggaagctca
ggggagctcggcgacgccccaaacgcaacacttctgaacacaaaggggcacacgaagctg
ctccagctcctcaccaccaaatcagagtccactgatccctgctcatcgcccccaatgggg
gacgaccagaactgtaaggatcagctgggcgggatcgggggtatgggtggtggtgccggg
cacaacaaccactccacctccctaaaggagaagcacaaaatcctccacaggttgctgcag
aacagcacctcgcccgtggagttggccaagctaacggcggaggctacgggaaaagacccc
gttggtccagagtcgtcttcgggggacagcatgggtgagctctgcatgaaacaggagccg
gggagccccaagaagaaggacaatgcactgctgcgctatctgctggacagggacgataac
ggcatcctggataaagccatcaagatggagcccggcgacggacccctgctggccaacgtc
aagacggagatgcaggagggagagttcgacatggccgaccagaccagtgagctggacgac
ctgctggaggacctgcagagcggcggccagcagcagcagcagcagatgttctcgagccaa
cagccagtcagaggaccagcctcctcttcgtcctcctcttcctctgctgcgcccggttcc
tccgtggaaaaacagagcatcatcagcgacatcctgcagatgacggagagcagcagcgga
ggcggagtcagcagccctcccaaccagcacagagccttccctcccatcagccctgcaggc
tttaacagcgccaggccgggtcagccgggtcgaggtgctcctccagtcaggattgagtct
ctggacggcggtgtcggcccaaaccccaacgctggaagaccgtttcctcctcagcacagg
aacaacgggccctactccttactgcagcagcagcagcagcaacagcagcaaagcatgatg
ggaacccacgcaggcatggccaaccaggctgcgatggccaatcaaggcatgctgagtaac
gggtcgatgncgggctccatgcagcagggctggggtcaccaggggtccatggggggcacc
gcgggggggccgatgatgggccaaggggtcgggccgagtcggatggtccccaacatgaac
gccgcaatgaccacgagaggcccgcccggatccagagccatggtcggcatgcagatgatg
ggcaacgagatggagatgacaaaccccgcctacactcagcagcaagctccacccaatcag
actgcaccatggccaaaccggatgatggctgtggatcactatggaaaccaaagcaggcca
ccgtacggcgccccccaggaggacaggatgcggtgctgcggccccggtcccgagggcccg
ccagacgaaggagccctgctgagccagctgtgctcggtgttgaaggactacgagggtctg
gaggagatcgacaagatgctggggatcccgacgctggctggacagggtcccatgtcggac
caggaccagtacctgggctcctcggacccatcagccagcatgaagcctttcctgtacggt
cagcactacggtggccctccagcgtacggcagcgcgccttcggacggtggcttccacggc
ccgtctatgagcggccacatggggccgcagaggatgacgcccgccggttacccacccatg
atgaggatgccggggggcgcggggcccaggcctgtcgggatccggccgggggggcccggt
ccaggagtgccgcctcagcccaacaacctgaggctccagctgcagcacagactccaggct
cagctgaaccgacagccaatggtgaaccagatgagtggagtgtccaatatgaatctacct
ctaagggctaatgtaccaaaccagggaaccctcaacgctcagatgctggcccagcgtcag
cgcgagtacctcagcaaccacctacgccaacgccaacacctgcagcagcagcagcagcag
cagcacgtgcaccagcagcgcgccatgatgatgcggactcagggcatcaacatgccccca
ngcgggggcgccgccccaacgccgatgcccgtgggcggcaccaacccgcggctcccgcag
ggcaacccgcagcagttcccctacccggcctccagctacggtaccggcctgccctctcct
cctccacctcctcaccccggctcctccagccccttctcctcccctctctcccccggccat
cacctggctagccagggcatgatgggaaatgtaggcgggcagtacagcggggtaatgagc
cccccgtcccagcacagtgcctaccagttcagcagttcaggaatgacccagcagcagcaa
caccaggaccccgtgtcaggttttccttgcggggctgcgacccctcagagccccctgctg
tcccccagaatggggccgggtcagagccccatgctgcagcagaaccagggccaaccccaa
acccagccccagggtccgaaccacagaggaccaccggcctaccaggcgacccccgggtgg
tcccaacccgccaacatctccaccagcaacagcgtttacccccagcagtcccagtcgcag
tactccacacaagccaacggaggaatgtacaacagcaacaacaacaacatgaacctggga
gtcatggccaacaacggcggcaacatgaaccacatgtcaggacagatgagctccatgaac
acagagcaggtgagggacggcagcctgatcctggagcagctggcaggaatggacatgttg
aaccaagacggtgaacccaattctaatttctgctga
DBGET
integrated database retrieval system
