Anoplopoma fimbria (sablefish): 129116299
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Entry
129116299 CDS
T09102
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG3
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04136
Autophagy - other
afb04140
Autophagy - animal
afb04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
129116299
04140 Autophagy - animal
129116299
04136 Autophagy - other
129116299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129116299
04121 Ubiquitin system [BR:
afb04121
]
129116299
03029 Mitochondrial biogenesis [BR:
afb03029
]
129116299
Membrane trafficking [BR:
afb04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
129116299
Ubiquitin system [BR:
afb04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
129116299
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129116299
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Autophagy_act_C
Med13_N
Mycobacteriophage_Gene3
Motif
Other DBs
NCBI-GeneID:
129116299
NCBI-ProteinID:
XP_054483235
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MQNVFNSVKGTALGVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWASGEE
VKVKPYLPPDKQFLLTRNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNSGVLGVT
DAVQELSLDNNKDKNMNATSAAYGDDDEEDEDEDGEAADMEEYEESGLLETDEATLDTSK
MVEAKAKAEPGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEDRQPLTVEQMYEDISQ
DHVKKTVTIENHPNLPPPAMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQ
AVIPTIEYDYTRHFTM
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgtcttcaacagcgtcaagggcacggcgctcggggtggcggagttcctcacg
ccggtgctgaaggagtccaagttcaaagagactggagtgatcacaccagaggagtttgta
gcagccggggatcacttggttcaccattgccccacatggaaatgggccagtggggaggaa
gtcaaggtgaagccatatctgcccccggacaaacagtttctcctgacacgcaacgttccc
tgttacaagcgttgtaaacagatggagtattcagatgagctggaggccatcatagaggag
gatgatggagatgggggctgggtggacacgtaccacaactcaggtgtgttaggagtcaca
gatgctgtacaagaactttcactggacaataacaaggacaagaatatgaacgccacatct
gcagcatatggtgacgatgatgaagaagatgaggacgaagatggagaagcggccgatatg
gaagagtacgaagaaagtggcctgttggaaaccgatgaggcgaccttggacaccagtaaa
atggttgaagccaaagccaaagcagagcctggaggcgaagatgccatccttcagacgaga
acatatgacctgtacatcacatatgataaatactaccagacacctcgactctggctgttt
ggatatgatgaggacagacaaccactgactgtagaacagatgtacgaggacatcagccag
gaccatgttaagaagacggtcaccattgagaaccaccccaaccttcctccacctgccatg
tgctctgtccacccttgcaggcatgcagaggtgatgaaaaagatcattgagactgtggca
gaagggggaggagagttgggagtgcatatgtaccttctaattttcctcaagtttgtccag
gctgtcattcctacaatagaatacgactacacaagacacttcaccatgtag
DBGET
integrated database retrieval system
