Anoplopoma fimbria (sablefish): 129116412
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Entry
129116412 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
afb04054
]
129116412
Pattern recognition receptors [BR:
afb04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
129116412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
WHD_NOD2
LRR_6
PRY
SPRY
LRR_1
LRR_4
LRR_8
DUF577
SUS_EPBD
Motif
Other DBs
NCBI-GeneID:
129116412
NCBI-ProteinID:
XP_054483290
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MSNCVEEEEDRAESLVSGCLSMKSDMSKGLPLNFSNEPGPSDTKVQYRQRAESPVSSCLS
MKSDWSNDLPPDFSNEPGPSDTKEKKRSHVSEEELLSRSRTRAGLQTASQTSSVQTDRGL
QEVLDEHKISLRRRCERVTEGSDETGSGTPLNRIYTELYITEGQSEEVNTQHEVRQLESA
SKKKTLHDTPIKYHDIFKASPDQQRRIRVVLTNGVAGVGKTFSVQKFTLDWAEGLENQDV
SLVILLSFRELNLIKDEQYSLLKLLHVFHPTLQKVTAEKLSVCKLLFIFDGLDESRLSLD
FHNNKVVSDVTQKTSVNVLLTNLIEGNLLPSALVWITSRPAAANQIPPTRVDRVTEVRGF
TDPQKEEYFRRRFSDEELSSRIISHIKTSRSLHIMCLIPVFCWITATVLDHMWTTDQRGE
LPKTLTDMYSHFLLVQTKRKKQKYHEGHKTSPQELMEADREVLLKLGRLAFEHLEKGNIM
FYQEDLEQCGLDVTEASVYSGVCTEIFKRESVIFQKTVYCFVHLSVQEFLAAVYMFHCFT
NRNTEVLKDFMGEDWKNEHPWNIKAFLLEKMFFGINKSPEPSLEDFLKRAMEKSLQSKNG
HLDLFVRFLHGLSLESNQRLLGGLLGQTDNSPEIIQRAINNLKEMNSDEISPDRSINIFH
CLMEMNDLSVHQEIQEFLKSENRSEKKLSEIHCSALAYMLQMSEEVLDELDLKKYNTSEE
GRWRLIPAVRNCRKAQLSGCGLSETHCEVVASALKSNPSHLRELDLSNNNLQDSGVKLLS
AGLESPHCRLETLRLSDCNLSERSCEALSSVLSSQSSSLRELDLSNNDLQDSGVKLLSAG
LESPHCKLETLRLSGCLITEEGCASLDSALSSNPSHLRELDLSYNHPGDSGVKLLSAVLE
DPHWRLETLRVEPAGVRWFRPGLRKYSCELTLDTNTVNRNLKLSDNNRKVTHVEEDQSYP
DHPDRFDHWKQLLCRTGLTGRCYWEVEWRGDVYISVSYRGIRRRGDSEDCWFGWNDQSWS
LFCSDDGYYVRHNKTETPISSSSSSSSSSSSGRVAVYVDCPAGSLSFYRVSSDTLIHLHT
FNTTFTEPLYPGFWVLVIWFLSVSVFSVGGRVSSW
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattgtgtggaggaagaggaggacagagcagagtctctagtctccggctgtctg
tctatgaagagtgacatgtccaaaggtcttcctctgaacttcagtaatgaacctggaccc
tcagacacaaaagttcagtacagacagagagcagagtctccagtatccagctgtctgtct
atgaagagtgattggtccaatgatcttcctccagacttcagtaatgaacctggaccctca
gacacaaaagagaagaagaggagtcatgtttctgaggaggagctgctgtccagatccaga
acaagagctggactgcagacagccagtcagaccagctctgtacaaacagatagaggtctg
caggaggttctagatgaacataagatcagtctgaggaggagatgtgaacgtgtgactgaa
ggaagtgatgaaacaggaagtggaacccctctcaacaggatctacactgagctctacatc
acagagggacagagtgaagaggttaatacccaacatgaggtgaggcagcttgagtcagct
tccaagaagaagaccctccatgacactccaatcaagtaccacgacatctttaaagcctca
ccagaccaacagagacgcatcagagtcgttctgaccaacggcgtcgccggcgttggaaaa
accttctcagtgcagaagttcactctggactgggcagagggtttggaaaaccaagatgtc
agtctggtgattctgctttcgttcagggagctgaacttgatcaaagatgagcagtacagt
cttctgaagctgctccatgttttccatccaacattacagaaggtcacagcagagaagctc
tctgtctgtaaacttctgttcatctttgatggtctggatgaaagcagactttcattggat
ttccacaacaacaaggtcgtgtctgatgtcacacagaagacatcagtcaacgtgctgctg
acaaacctcatcgaggggaatctgcttccctcggctctcgtctggataacttccagacct
gcagcagccaatcagatccctcctacacgtgttgacagggtaacagaagtacgaggcttc
acggacccccagaaggaggagtacttcaggaggagattcagtgatgaagagctgtccagc
agaatcatctcacacatcaagacatccaggagcctccacatcatgtgtctaatcccagtc
ttctgctggatcactgctacagttctggaccacatgtggactacagaccagagaggagag
ctgcccaagaccctgactgacatgtactcacacttcctgctggtccagacaaagaggaag
aagcagaagtaccatgagggacacaagacgagtccacaggagctgatggaggctgacagg
gaagttcttctgaagctggggaggctggcgtttgaacatctggagaaaggaaacatcatg
ttctaccaagaagacctggagcagtgtggtcttgatgtcacagaggcctcggtgtactca
ggagtttgtacagagatcttcaaaagagagagtgtgatcttccagaaaacagtctactgc
tttgttcatctgagtgttcaagagtttctggctgccgtctacatgttccactgtttcaca
aacaggaacacagaggtactgaaggacttcatgggggaagactggaaaaatgaacatccc
tggaacatcaaagcctttcttcttgagaagatgttttttggaatcaataaaagccctgaa
ccatctctggaggacttcctgaagagagccatggagaaatcccttcaaagtaaaaatggc
cacctggacctgtttgtccgcttccttcatggcctctctctggagtccaaccagagactc
ttaggaggcctgctgggtcagacagacaacagtccagaaatcatccagagagccatcaac
aacctgaaggagatgaacagtgatgaaatctctcctgacagaagcatcaacatcttccac
tgtctgatggagatgaacgacctctcagtacatcaggagatccaagagttcctgaagtca
gagaacagatcagagaagaaactctcagagatccactgctcagctctggcctacatgctg
cagatgtcagaggaggttctggatgagttggacctgaagaagtacaacacatcagaggag
ggacgatggagactgattccagctgtgaggaactgcagaaaggctcaactttctggctgt
ggactctcagagactcactgtgaagtcgtggcctcagctctgaagtccaacccctcccat
ctgagagagctcgacctgagtaacaacaacctgcaggattcaggagtgaagctgctgtct
gctggactggagagtccacactgtagactggagactctgagactgagtgactgtaacctc
tcagagagaagctgtgaagctctgtcctcagtcctcagctcccagtcctctagtctgaga
gagctggacctgagtaacaacgacctgcaggattcaggagtgaagctgctgtctgctgga
ctcgagagtccacactgtaaactggaaactctcaggctgtcaggctgtctgatcacagag
gaaggctgtgcttctctggactcagctctgagctccaacccctcccatctgagagagctg
gacctgagctacaatcatccaggagactcaggagtgaagctgctgtctgctgtactggag
gatccacactggagactggaaactctcagggtggagcctgctggagtccgatggttcaga
ccaggtctgaggaagtattcctgtgaactcacactcgacacaaacacagtgaacagaaac
ctcaaactgtctgacaacaacaggaaggtgacacatgtggaggaggatcagtcatatcct
gatcatccagacagatttgaccactggaagcagctgctgtgtagaactggtctgactggt
cgctgttactgggaggtcgagtggagaggagacgtttatatatcagtgagttacagagga
atcagaaggagaggagacagtgaagactgttggtttggatggaatgatcagtcctggagt
ctgttctgctctgatgatggttactatgtccgtcacaataagacagaaacacccatctcc
tcctcctcctcctcctcctcctcctcctcctctggtagagtagcagtgtatgtggactgt
cctgctggctctctgtccttctacagagtctcctctgacacactgatccacctccacacc
ttcaacaccacattcactgaacctctttatcctgggttttgggttctggtcatctggttc
ctcagtgtctctgtgttctctgtaggagggagagtctcctcctggtag
DBGET
integrated database retrieval system
