Anoplopoma fimbria (sablefish): 129116483
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Entry
129116483 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: thyroglobulin-like
KO
K10809
thyroglobulin
Organism
afb
Anoplopoma fimbria (sablefish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COesterase
Thyroglobulin_1
Ephrin_rec_like
PAN_1
PAN_3
Motif
Other DBs
NCBI-GeneID:
129116483
NCBI-ProteinID:
XP_054483330
LinkDB
All DBs
Position
Unknown
AA seq
2408 aa
AA seq
DB search
MARLLHITFILVCCLGLLQGKASEYQLESETLSQCELLRGVAVAKQQGDIPHCAHDGRFR
PVQCSGRGHECWCVDAEGQEVVGTRTNSSAPHCASPCQQQSVLRCSPSGLFESVQCDSSR
GQCWCVDEDGMELYGTRQPGTPQRCPGSCEVRSRRLLHGFRSHSPPQCAEDGSFLPVQCK
LINTTDRAELDLLTTFNRFPEAFETFGSFRKFFPTVSSFCFCSDSRGRELEDTGVELLLS
EVYDSAFSGLRSGRSFSQTNIYRVLQRRMLGVRLALTGHFRCPSACEEERRAAVETSSVR
VPSCETGGSFTSRQCQQGGQCWCADPTGREITGTRQLGDSLVCSSGLSGCLSQRRLALSR
LFSGPVDPPFLTSSIRSPASCLSLLRPLRELLPVEADPASILSLLVQVLDGLFPSVGGAL
QALVRSSPRRLQENLFGGKFLKNAASFNFSGALGARGXLGPDRLASQSVSISLQKNRDLV
QSVSRALEDPAFLSALQQTLRSSSSSHSSSLQQVLLPLLGSCSEDEDEASIFVPSCSSSG
GFQEVQCRGADCWCVDTQGQEVTGSRTAGGRPRCPSRCERDGAMALKVKGNMAAGAEIHV
PACSEDGDFLPLQCVGSRCFCVDAEGKTMTSGSTGGAVSCPKRTTQKLQSSAGRCSEAFH
EVTAFRQEVRSVVALSNSSHLPLGYGFLLAKGLRLTPEELLIGQSEEELRITDRLLSRSR
AALRLAAFSTVQMFLPPQRPSYQPFTPQCDADGHWMHTQCYHSTGQCWCVDEDGEYIPDS
LTSRSLHLPRCLTRCQRARAHTLLSGWMKGSDIITTSPYRPECDEDGAFSVLQTGDAAGW
CVNRLTGETIQTATPSPAGQLTCPSWCDLRGFQCRPDGSFIPLQCDVTSCWCVSEDGQEV
DGTRTPRQTGRTPSCDRPLCPDSAVTHGALVCRPAADDVQSCDLVCHRGYQNSLPVGSFL
CRTESRRWDGDNKPLSGACQISQPLQSVSSSQLWSLSSSCSQISSLQTLLFPSMTSRGLC
SAQIPVSGRSVSVCGDSSVRLTCDSDDTLKLTLTWTAHLSDLPTSDLPDLHDIGLFLNES
RLLEGVQGLLGNIRSMLTSEPKLVSVTTPIFGCSRGHHLDSDAEGCVVCPAGSYSXRGAC
PLCPQGTYQDEDGRDFCNRCPRGSSPAGASSVNQCMTECQRRGLRCSERGDFLSAQPDFL
SGRWRCFDSEGXELEWTNSDKPLTDDECSVLSRFQAVPGSDLIVGAEDTEVLQTTTSDLT
SCVQACAVEPTCHHVALFNRQTQCELYSTHTLNTHCNTSQQTSGFLGNPQAEVFDSLSCS
LRVRGVASDLLVIRKKGTQSFERMRMMKAVSGVFRTQVFSSGRTSLSDAHRFCQDGCSRD
ACCDGFVLNQNSLNGGTLLCGWLRTPSVLMCGDQDWDMIGQGKANRICGAGLTYNEQQKS
FVFDFGGQKFTITDSSLPADSKNKKDYQASIVSFQAVYLNTDADSAAGGSGSSSCAAAEL
SSPLEVSVQMKFESLSEDDVLVDPQRKLPTLSFWLNRNSYNSQQALLWCLTRCDEEQQCS
VVDLRDADSAGFFSCSLYSDSRVCGAYDKPLRRPCRPLLDRPPNNSYSKKVNLSGPVKSF
YDRVSFQKMVSYSVRSRVSLGENTPLSEGFMECERRCDEDPCCRGIGFVRDTKSPGGPGV
VCLSLISLGVQTCAEDDMTSWRTQDCSPSVVKTTPDPFGWYQKPVNQWSSSPALCPPFTL
PTTSNNVSRGRWRLLSDSSVLVDPSLSTYDVIHVSRDIASDRDRTRDWCLHACQEAESCV
AVSLREEESATRCVLYPDTTACGLSSXPSSSSPASSCRLVIREPXPQVYLRTERLPSVTS
VSVPGHGTLQGVVVETALGSDRKTVVEFLGVPYARPPIGSLRFEAAQAADWTGAWDATKP
RPSCIQPGDEDSSSSSEDCLYLNIFSPAALSGRVPVLVFFFNPSANQNPGLLDGSILAAV
GNIVVVTASYRTAALGFLSTGKSGSSGLRGNYGLSDQEAVLRWVDAHIALVGGDNRTVTV
GSERRGADITSLHLLSSSSPPLFKRMMLMGGSVFSPSLVQTPSTSRRQALDLAKELGCVT
SDLTDDDKMADCLRAAPAFKLNAAQTKLLAVSGPFQSWSPVRRSVSQSSLLRVDLLLGTS
EHDGLISRARRIKDFEALQGRADGKTAFYEALSRSLGGETGSELLKEAAAWFYSLDHGPT
PAGYNLFSRALNNATRDLFIICPSLRMASRWANSKANVFLYHQPATSSHNRADVSVPLDV
QLVFGTPHRPISSQRFTSSERRLSLAAMTYVSSFIKTGNPNPSPLWAESVLPRWQQVLSS
EAPPTYLQLSPDLRHHQGLSQSSCSFWSQLGTRLTSLSGVSGAEPVLTPELPLVAPSSQS
QTEKDAYN
NT seq
7227 nt
NT seq
+upstream
nt +downstream
nt
atggctcggctgctccacatcaccttcatcctggtctgctgcctcgggctgctgcagggc
aaagcttcagagtaccagctggagtcagagacgctgagccaatgtgagttgctaaggggc
gtggcggttgctaagcaacaaggtgacatccctcactgcgcgcacgatggcaggttcagg
cctgtgcagtgcagtgggcggggtcacgagtgttggtgcgttgacgctgaaggtcaggag
gtcgtcgggactcgaaccaacagctctgctcctcactgtgcgtctccctgccagcagcag
tcggtcctgcgttgttctccttcaggcctctttgagtcagttcagtgtgactccagtagg
gggcagtgttggtgtgtggatgaggacggcatggagctctacgggaccagacagcccggg
acacctcaacgctgtcccggcagctgtgaggtgaggtcgaggcgtctcctgcacggcttc
aggtctcactctcctcctcagtgcgccgaagacggcagcttcctgcccgttcagtgtaaa
ctcatcaacacgaccgacagagcagagctggacctgctgaccaccttcaacaggttccca
gaagcctttgagacgttcggtagtttcaggaagtttttcccgacggtttcctcgttctgc
ttctgttcagacagcagaggtagagagctggaagacacaggtgtggagctcctcctgtct
gaggtgtacgactcagcgttctccggtctccggtccggtcgctccttctctcagaccaac
atctacagagtcctgcagaggaggatgctgggagttcgcctcgccctcaccggacacttc
agatgtccctctgcctgtgaggaggagcgacgggcggctgtagagacgtcgagtgttcga
gtcccgtcctgtgagaccggaggatccttcacctccagacagtgtcagcagggggggcag
tgctggtgcgcggaccccacggggagggagattactgggacacggcagctgggagactcc
ctggtctgcagttcaggtctctctggctgtctctctcagcgccgtctggctctctcccgg
ctcttctctggtcccgttgatcctcctttcctgacctcctccatcagatccccggcctcc
tgtctctccctcctccggcctctcagggagctcttgccggtggaggcggacccggcctcc
atcctgtctctcctggtccaggtcctcgacggtctcttcccctcggtgggcggagctctg
caggctctggttcgctcctccccccgtcgcctccaggagaacctgttcggagggaagttc
ctgaagaacgccgcctcctttaacttcagcggagcgctgggagctcgaggantcctcggt
ccggaccggctcgcctctcagagcgtctccatcagcctccagaagaaccgggacctggtc
cagtctgtcagcagagctctggaggacccggccttcctctctgccctccaacaaacactg
aggagcagcagcagctcacactcttcctcactgcaacaggttctgcttcctctgctgggt
tcctgctccgaggacgaggacgaggcttccatcttcgtccccagctgctcctccagcggt
ggtttccaggaggtccagtgtcgtggtgcagactgctggtgtgtggacactcagggccag
gaggtcacggggtcgcgtaccgccggtggtcgaccccgatgtccgtcccgctgcgagaga
gatggagcgatggctctgaaggtgaaaggaaacatggcggccggcgctgagatccacgtc
ccggcgtgctcggaggacggggacttcctgccgctgcagtgcgtcggctcacgctgcttc
tgtgtggacgcggaggggaagacgatgacctccgggtcaacgggcggcgccgtcagctgt
ccaaagagaacaacacagaagcttcagtcctctgcaggtcgctgctctgaagcgttccat
gaggtcacggcgttcagacaggaagtgaggagcgtggtcgctctctctaactcctcccac
ctccctctgggatacggattcctattggccaaaggtctgcgtctgaccccagaggagctc
ctgattggccaatcagaggaggagctgcggatcactgataggctgctgagccgctccaga
gctgctctgcgattggctgctttctccactgtccagatgttcctgcctcctcagcgtcct
tcataccaacctttcactccacagtgtgacgctgacggacactggatgcacacacagtgt
taccacagcacaggtcagtgttggtgtgttgatgaagacggagagtacatccccgactct
ctgaccagccgctcactccacctgccacgatgtctgactcgctgtcagagggctcgggct
cacacgctgctctctggttggatgaaaggctctgacatcatcaccacttcaccttacaga
ccagagtgtgacgaggacggtgctttctcggtgctgcagaccggtgacgctgcaggctgg
tgtgtgaaccgtttgactggagagacgatacagacggcgacaccgagccctgcaggacaa
ctgacatgtcccagttggtgtgatcttcggggcttccagtgtcgccccgacggctccttc
atcccactgcagtgtgacgtcacttcctgttggtgtgtctccgaggacgggcaggaagtg
gacgggacccgtacgccccgacagacgggccggacgccgtcatgtgatcgtcctctctgt
cccgactccgccgttacccatggtgcactggtgtgccgcccggcagctgatgatgtgcag
agctgtgacctcgtctgtcaccgtggttaccagaactcacttcctgtcggcagcttcctg
tgccggactgagagccggcgatgggacggagacaacaaaccgctgagtggagcctgtcag
atctcccagcctctccagtcggtgtcgtcctctcagctctggtcgttgtcgtcgtcctgc
tctcagatcagcagtttgcagactctgttgttcccctcgatgaccagcagggggctctgc
tctgcacagattcccgtgtccggtcgctctgtgtcggtgtgtggcgactcgtcggtgcgt
ctgacgtgtgacagcgacgacacgctgaagttaaccctcacctggaccgcccacctgtcc
gacctcccgacctctgacctccccgacctccacgacatcggtctgtttctgaatgagtcc
agacttcttgaaggcgttcagggacttctgggtaatatccgctccatgcttacttcagaa
cccaaacttgtttccgtgacaacaccgatcttcggctgttcccgcggtcaccacctggac
agcgacgctgaaggctgcgtcgtctgtcctgctgggagttactccnagagaggggcgtgt
cctctgtgtcctcaggggacctatcaggacgaagatgggcgggacttctgcaacaggtgt
cccagaggctcctcacctgccggagcatcatccgtcaatcaatgtatgaccgagtgtcag
aggcggggcctacggtgttcagagcgaggcgacttcctgtcagcgcaaccagacttcttg
tccggcaggtggaggtgttttgacagtgaggggncggagcttgagtggacgaacagtgac
aagcctctgactgatgacgagtgctcagttctcagcaggtttcaggctgttcctggatca
gatctgattgtcggagctgaagacactgaagtcctgcaaacaacgacctctgacctcaca
tcctgtgtccaagcgtgtgcagtggagccgacctgccaccatgtggcgctgttcaacaga
cagactcagtgtgaactgtacagcacacacacactgaacacacactgcaacacctcccag
cagaccagtgggtttctgggtaatcctcaggccgaggtctttgattcgctgagctgctct
ctgagagtgaggggcgtggcctcagatctactggtcatcaggaagaaaggtactcagagt
tttgagaggatgaggatgatgaaggcggtctcaggtgtgttcaggactcaggtgttctcc
tccggacggacctccctctccgacgctcatcgtttctgtcaggacggctgcagccgggac
gcctgctgcgacgggttcgtcctcaaccagaacagcctgaacggagggactctgctctgt
ggttggctgaggactccatcagtcttgatgtgcggcgaccaggactgggatatgattgga
cagggaaaagccaatcgcatctgtggggcggggcttacctacaacgagcagcagaagagc
ttcgtgttcgacttcggaggacaaaagttcaccatcactgattcttctctgccggccgac
agtaagaacaagaaggactaccaggcctccatcgtcagcttccaggccgtctacctgaac
actgatgctgattcagcagctggaggttctggttcttcttcctgtgcagcagcagaactc
agttctcctctggaggtttcagttcagatgaagtttgagtctctgtcggaggacgacgtc
ctcgtggatcctcagaggaaactccccacgctctccttctggctcaacaggaacagctac
aactcccagcaggcactgctctggtgtctcacacgctgtgatgaggagcagcagtgctcc
gtcgtcgacctcagagacgccgactcagcaggtttcttcagctgctcgttgtattcggac
agcagagtttgtggagcttacgacaaacctctgagacgaccgtgtcgccccctgctggac
agaccgcccaacaactcctacagcaagaaggtgaatctgtccggaccggtgaagagtttc
tacgacagagtttccttccagaagatggtttcttactctgtacgcagccgagtcagtctg
ggagaaaacacaccgctgtctgaggggttcatggagtgtgagcggcgttgtgatgaggat
ccttgttgccgcggcatcggcttcgtccgggacaccaaatcaccaggtggtccaggcgtg
gtgtgtctgtctctcatcagtctcggggttcagacctgtgctgaggacgacatgacgtcc
tggaggactcaggactgctccccgtctgtagtgaagaccacaccggaccccttcggctgg
taccagaagcctgtgaatcagtggagttcttctccggctctctgtcctccgttcaccctg
ccaacaaccagcaacaatgtgtctcggggtcggtggcgtctcctctctgactcatcagtc
ctcgtcgacccgtctctctctacctatgatgtcatccacgtgagccgtgacatcgcctct
gacagggacaggaccagggactggtgtctccatgcctgtcaggaggcggagtcttgtgtc
gccgtgtcactcagggaggaggagtcagccacccgctgcgtcctctatcccgacaccacc
gcctgtggtttaagctccngccccagctcgtccagccccgcctcctcctgcagactggtc
atcagagagcccnngccccaggtgtacctgaggacagagcggttgccgtcggttacctcc
gtctccgtcccgggtcatgggaccctgcagggcgttgtcgtggaaacggccctgggctca
gacaggaagacggtggttgagttccttggcgtcccgtacgctcgtccaccaataggatcg
ctccgctttgaagcagctcaggcggctgattggacgggagcctgggacgccaccaaacca
cgtcccagttgtatccagccaggtgatgaagactcttcgtcgtccagtgaagattgtctc
tacctgaacatcttctctcctgctgctctgagcgggcgtgtcccagtcctggttttcttc
ttcaacccttcggccaatcagaacccaggcctgttggatggctccatcctcgctgctgtg
ggtaatatcgtcgtggtaaccgccagctacagaaccgcggcgctgggattcctgagcacc
ggtaaatcaggttcgtctggtctccgtggtaactacgggctgtcggaccaggaggcggtg
cttcgttgggttgacgcccacatcgccctggtgggcggagacaacaggacagtgacggtc
gggtcggagagacgaggcgctgacatcaccagccttcatctcctctcctcctcctctcct
cctctgttcaagcgtatgatgctgatgggcggctctgtgttttctccttcactggttcag
actccctccacctccagacgtcaggcgctcgatctggccaaagagctcggctgtgtgacc
tctgacctcaccgatgacgacaagatggccgactgcctcagagcggcgcctgcgttcaaa
ctcaacgccgctcagaccaaactgttggcggtcagcggtccgttccagtcctggtctccg
gtccgtcggtccgtctctcagtcgtccctcctcagagtcgacctgctgctgggaacatct
gaacacgacggtctgatcagccgggctcgcaggataaaggacttcgaggcccttcagggt
cgagccgacggtaagacggcgttctacgaggctctgagtcgctcgctgggcggcgagaca
ggaagtgagctgctgaaggaggcggcggcctggttctactctctggatcacggtccgaca
ccggccggatacaacctgttctccagagcgctcaacaacgccacccgagatctgttcatc
atctgccccagtctgaggatggctagccgctgggctaacagcaaagctaacgtcttcctg
taccaccaacctgccaccagctctcacaacagagccgatgtgtctgttcctctggacgtt
cagcttgtgttcgggacgcctcatcgtccaatcagctcgcagcgtttcacttcctctgag
cgacgcctctctctggccgcgatgacctacgtctccagcttcatcaagaccgggaacccg
aacccgtctcctttgtgggcggagtcagttctgccccgctggcagcaggtcctgtcctct
gaggccccgcccacctacctgcagctaagccccgaccttcgacatcatcagggtctgagt
cagagctcctgctccttctggagccaactgggaaccagactgaccagtctgagcggtgtg
tcgggggcggagcctgtgttgacccctgagctcccactggttgccccatccagccaatca
cagactgagaaagacgcctacaactaa
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