Aliarcobacter faecis: AFAEC_0160
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Entry
AFAEC_0160 CDS
T06664
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
afc
Aliarcobacter faecis
Brite
KEGG Orthology (KO) [BR:
afc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afc03016
]
AFAEC_0160 (truA)
Enzymes [BR:
afc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AFAEC_0160 (truA)
Transfer RNA biogenesis [BR:
afc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AFAEC_0160 (truA)
Prokaryotic type
AFAEC_0160 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF3666
DUF2689
TBP-TOTE
Motif
Other DBs
NCBI-ProteinID:
QKF72382
LinkDB
All DBs
Position
162913..163635
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AA seq
240 aa
AA seq
DB search
MNLKFTISYDGSSFFGSQKQPNKATVEDELLKIFKSINIETKIILSGRTDKDVHATKQVF
NCEIPEYWSDLEKLKTIINKRVNPSIKIVKIDKVASDFHARFSAKRRVYRYLITQKELNP
FNTKYITYVKNVDEELLKNAIKEFIGVYDFKYFHKTGSQKEQTKREIFDTKFYKYRDIYV
FRFEANSYLRSQIRLMVGFLLAINDKKLTIDDLKNQLNLTKRSFKTPTISNGLYLAKIKY
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcttaagtttacaatatcttatgatggaagctctttttttggaagtcaaaaacaa
ccaaataaagctactgttgaagatgagcttttaaaaatttttaaaagtatcaatattgaa
acaaaaattatacttagtggaagaactgataaagatgttcatgctacaaaacaggttttt
aattgtgaaattccagaatattggagtgatttagaaaaacttaaaactattataaataaa
agagtaaatcctagtataaaaatagtaaaaatagataaagtagcttctgattttcatgca
agattttctgcaaaaagaagagtttatagatatttaattactcaaaaagagttaaatcca
tttaatacaaaatatataacttatgtaaaaaatgtagatgaagagcttttaaaaaatgca
ataaaagagtttataggagtttatgattttaaatattttcataaaacaggaagccaaaaa
gagcagacaaaaagagagatttttgatacaaaattttataaatatagagatatttatgtt
tttagatttgaagcaaactcttatttgagaagtcaaattaggcttatggttggattctta
ctagcaataaatgacaaaaaattaacaatagatgatttaaaaaatcaattaaatcttaca
aaaagaagtttcaaaactcctacaatatcaaatggattatatctagcaaaaataaaatat
tag
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