Aliarcobacter faecis: AFAEC_0514
Help
Entry
AFAEC_0514 CDS
T06664
Symbol
groEL
Name
(GenBank) 60 kD chaperonin (cpn60)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
afc
Aliarcobacter faecis
Pathway
afc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFAEC_0514 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afc03019
]
AFAEC_0514 (groEL)
03110 Chaperones and folding catalysts [BR:
afc03110
]
AFAEC_0514 (groEL)
03029 Mitochondrial biogenesis [BR:
afc03029
]
AFAEC_0514 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afc04147
]
AFAEC_0514 (groEL)
Enzymes [BR:
afc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AFAEC_0514 (groEL)
Messenger RNA biogenesis [BR:
afc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AFAEC_0514 (groEL)
Chaperones and folding catalysts [BR:
afc03110
]
Heat shock proteins
HSP60 / Chaperonin
AFAEC_0514 (groEL)
Mitochondrial biogenesis [BR:
afc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AFAEC_0514 (groEL)
Exosome [BR:
afc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AFAEC_0514 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
AFAEC_0514 (groEL)
Exosomal proteins of breast cancer cells
AFAEC_0514 (groEL)
Exosomal proteins of colorectal cancer cells
AFAEC_0514 (groEL)
Exosomal proteins of bladder cancer cells
AFAEC_0514 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QKF72705
LinkDB
All DBs
Position
504857..506488
Genome browser
AA seq
543 aa
AA seq
DB search
MSKEIIFSDSARNRLYAGVEKLADAVKVTMGPRGRNVLLQKSFGAPTITKDGVSVAREIE
LKDTIENMGAQLVKEVASKTADEAGDGTTTATVLAHSIFKEGLRNVTAGANPISLKRGMD
KATEAILAELKKASKVVANKTEIEQVATISANSDSAIGKMIAEAMEKVGKDGVITVEEAK
GISDELDVVEGMQFDRGYLSPYFVTNPEKMTTEFNNPFILLYDKKISSLKELLPILEGVN
KAGRPLLIIAEDVDGEALATLVVNRLRGALQIAAVKAPGFGDRRKAMLEDIAVLTGATVI
SEELGMKLETTDLSALGVATKIVIDKDNTTIVDGNGSKEAVLGRVNQIRAEISNTTSDYD
REKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATRAAVEEGIVIGGGAALIR
AAAKVKLDLCGDEQIGANIVLRAIKAPLKQIALNAGYDAGVVANEVEKSSNDNLGFNAAT
GEYVDMFEAGIVDPAKVERVAMQNAVSVASLLLTTEATVTEIKEDKAPAMPDMSGMGGMP
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagagattatatttagtgatagtgcaagaaatagattatatgcaggtgttgaa
aaactagcagatgcagtaaaagttacaatgggaccaagaggaagaaatgtactacttcaa
aaatcttttggtgcaccaactattacaaaagatggtgtaagtgttgctagagagattgag
ttaaaagatactatagaaaatatgggagcacaattagttaaagaagttgctagtaaaact
gctgatgaggctggtgatggaacaacaactgcaacagttttagctcactcaatttttaaa
gagggtcttagaaatgtaacagctggagcaaatccaatctctttaaaaagaggaatggat
aaagcaacagaagctattttagcagagttaaaaaaagcttcaaaagttgttgcaaataaa
acagaaattgaacaagttgctacaatttcagcaaattctgatagtgcaattggaaaaatg
attgctgaagctatggaaaaagtaggaaaagatggagttattactgttgaagaagcaaaa
ggtatctctgatgaacttgatgttgtagagggaatgcagtttgatagaggatatttaagt
ccatattttgttacaaatcctgaaaaaatgacaacagagtttaataatccatttatttta
ctttatgataaaaaaatctcttcattaaaagagcttttaccaattttagaaggtgtaaat
aaagcaggaagaccacttttaattattgctgaagatgttgatggtgaggcattagctaca
ttagtagtaaatagattaagaggtgcattacaaattgctgctgttaaagctcctggattt
ggagatagaagaaaagcaatgcttgaagatattgcagttttaacaggtgcaacagttata
tctgaagagcttggaatgaaacttgaaactactgatttaagtgctttaggagttgctact
aaaatagtaattgataaagataatactacaatagttgatggaaatggtagcaaagaagca
gttttaggaagagtaaatcaaataagagctgaaatttctaatacaacaagtgattatgat
agagaaaaacttcaagaaagacttgcaaaacttagtggtggagttgctgttatcaaagtt
ggagctgcaacagagactgaaatgaaagagaaaaaagatagagttgatgatgcacttagt
gctacaagagctgctgttgaagagggaattgtaattggtggaggagctgcacttataaga
gctgctgccaaagtaaaacttgatttatgtggtgatgaacaaattggggcaaatattgtt
ttaagagctattaaagcaccattaaaacaaattgcattaaatgctgggtatgatgctggt
gttgtagcaaatgaagttgaaaaatctagtaatgataatttaggatttaatgcagcaaca
ggtgaatatgtagatatgtttgaagcagggattgttgatccagcaaaagttgaaagagtt
gctatgcaaaatgcagtttcagttgcttcacttctacttacaacagaagcaacagttaca
gagataaaagaggacaaagctcctgcaatgccagatatgagtggtatgggtggtatgcct
ggaatgatgtaa
DBGET
integrated database retrieval system
