Aliarcobacter faecis: AFAEC_0648
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Entry
AFAEC_0648 CDS
T06664
Symbol
dnaQ1
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
afc
Aliarcobacter faecis
Pathway
afc03030
DNA replication
afc03430
Mismatch repair
afc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AFAEC_0648 (dnaQ1)
03430 Mismatch repair
AFAEC_0648 (dnaQ1)
03440 Homologous recombination
AFAEC_0648 (dnaQ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afc03032
]
AFAEC_0648 (dnaQ1)
03400 DNA repair and recombination proteins [BR:
afc03400
]
AFAEC_0648 (dnaQ1)
Enzymes [BR:
afc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AFAEC_0648 (dnaQ1)
DNA replication proteins [BR:
afc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AFAEC_0648 (dnaQ1)
DNA repair and recombination proteins [BR:
afc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AFAEC_0648 (dnaQ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QKF72838
LinkDB
All DBs
Position
complement(626321..626944)
Genome browser
AA seq
207 aa
AA seq
DB search
MFRNIKNYFNKKNLKIEKYSFLFDEPILNEYICFDCETTGLDPQIDDIVSIGAVLIKDNT
IVSSKRFVRYVKPKSCSLSENSIKVHHIRECDLEDAFDIEDVVLEFLDFIGNRTLVGYFL
DFDIKMVNKYLKPKIGINLPNKTIEVSEIYHDFKIELIPQGFIDLRFNAILKELDIPSFG
VHDSFNDALMTAMIFLKLKNTPNVKIK
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaaatataaaaaattattttaataaaaagaatctaaaaattgaaaaatattca
tttctattcgatgaaccaattcttaatgaatatatctgctttgattgtgaaacaacagga
ttagatccacaaattgatgatattgtatctattggtgcagtattaataaaagataataca
atagtttcaagtaaaaggtttgtaaggtatgtaaaaccaaaatcttgttctttaagtgaa
aattcaatcaaagttcatcatataagagagtgcgatttagaagatgcttttgatatagaa
gatgttgtattggaatttttagattttattggaaatagaactttagttggttatttttta
gattttgatataaaaatggtaaataaatatttaaaaccaaaaataggaataaatttacca
aataaaactattgaagtttctgaaatttatcatgattttaaaatagaattaattccccaa
ggttttatagatttaagatttaatgctattttgaaagagcttgatatcccatcttttggt
gttcacgactcttttaatgatgccttaatgactgctatgatttttcttaaactcaaaaat
acaccaaatgtaaaaatcaagtaa
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