Aliarcobacter faecis: AFAEC_0846
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Entry
AFAEC_0846 CDS
T06664
Name
(GenBank) murein L,D-transpeptidase, YcbB/YkuD family
KO
K21470
L,D-transpeptidase YcbB
Organism
afc
Aliarcobacter faecis
Brite
KEGG Orthology (KO) [BR:
afc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afc01002
]
AFAEC_0846
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
afc01011
]
AFAEC_0846
Peptidases and inhibitors [BR:
afc01002
]
Cysteine peptidases
Family C82
AFAEC_0846
Peptidoglycan biosynthesis and degradation proteins [BR:
afc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AFAEC_0846
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Scaffold
Motif
Other DBs
NCBI-ProteinID:
QKF73021
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All DBs
Position
complement(823823..825562)
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AA seq
579 aa
AA seq
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MLNYKFMIPILLLNSYLFSSNINLELKNSLNKSVNSTLIKADRLKNYYSNNDIKSYWVDE
NGLKKISLEFINLVKNDPVYKPKVNELFKINELETKISNLDKSLSSYNKDLLYIELLLTE
IYDKYTNFLLKGSINWEEFKEKLKELKLKDIDAQWDRVFIKKDNKQILKEMIDTNNISVI
TEKVDTNYPGKKELIEAISNLEKVIENGDYKKLPKFKTLRAGDYGENVKSLRDRLIQSND
LAKACQSVVNVETLVTNSIKDEQNPDIQEIIEEKVSKEIPCEEYFDEDLKNAVINFQKQH
GLMADGIVGYSTQIFLNKSAKDKIKQIRLNIERMRWLPRDFGEKYLLINIPEYNLKMIED
NQIKLDMAVIVGDVKFPTPVFSDKMSYVVLNPTWNIPTSIVKKEVIPKLIKDPNYLNSKE
ISAFGNWRDESEAISNKDLIDSIILENPEALEGLRLAQAPGTQNPLGRMKFMFPNKHAVY
LHDTPNKYLFANARRAYSHGCVRLSKPNELLNLLSENNQNIDQNKVTEILKENKEKAINL
NQKLPIHIIYLTSWIDKDGTLQFREDIYNYDKLQRELLF
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgttaaactataaatttatgatacctattttgttattaaatagttatcttttttcttca
aatatcaatttagagctaaaaaactctctaaataaaagtgtgaattcaactttaataaaa
gcagataggctaaaaaattattattcaaataatgatattaaaagttactgggtagatgag
aatggcttaaaaaaaatatctttggaatttataaatttagtaaaaaatgatcctgtttat
aagccaaaagtaaatgaactttttaaaataaatgaacttgaaacaaaaatttctaattta
gataaatctctatcttcttataataaggatttattatatattgaattattattgactgaa
atttatgataaatatacaaatttcttattaaaaggttcaattaattgggaagaatttaaa
gaaaaattaaaagagttaaaattaaaagatattgatgctcaatgggatagagtatttata
aaaaaagataataaacagatattaaaagagatgatagatacaaataacatttcagtaatt
acagaaaaagtagatacaaattatccaggtaaaaaagagttaattgaggctatttcaaat
ttagaaaaagttatagaaaatggtgattataaaaaacttcctaaatttaaaactctaaga
gctggagattatggagaaaatgtaaaatctctaagagatagattaattcaaagtaatgat
ttagcaaaagcctgtcaaagcgttgtgaatgttgaaactttagttacaaatagtataaaa
gatgaacaaaatccagatatacaagagataatagaagagaaagtttctaaagagattcct
tgtgaagagtattttgatgaagatttaaaaaatgctgttattaattttcaaaaacagcat
ggtctaatggctgatggaatagttggttattcaacacaaatatttttaaataaaagtgca
aaagataaaataaaacagattagattaaatatagagagaatgagatggcttcctagagat
tttggagaaaaatatctattgataaatattcctgaatataatctaaaaatgattgaagat
aatcaaataaaacttgatatggctgtaattgtaggagatgtaaaattccctactcctgtt
ttctcagataaaatgtcttatgttgtattaaatccaacttggaatatacctacaagtata
gtaaaaaaagaggtaattccaaaattaataaaagatccaaactatctaaatagtaaagaa
attagtgcatttggtaattggagagatgaaagtgaagctattagcaataaagatttaata
gatagtataatattagaaaatccagaggccctagaagggttaagattagctcaagctcca
ggaactcaaaatccacttggaagaatgaagtttatgttcccaaataaacatgctgtatat
ttacatgatactccaaataaatatctatttgcaaatgcaagaagagcttattctcatggt
tgtgtaagactttctaaacctaatgagcttttaaatttactttcagaaaataatcaaaat
atagaccaaaataaagttacagaaatcttaaaagagaataaagaaaaagcaataaattta
aatcaaaaacttccaattcatattatataccttacttcttggattgataaagatggtact
ttgcagtttagagaagatatttataactatgataaattacaaagagagctacttttttaa
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