KEGG   Aliarcobacter faecis: AFAEC_0853
Entry
AFAEC_0853        CDS       T06664                                 
Symbol
tssI1
Name
(GenBank) type VI secretion system, syringe needle protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
afc  Aliarcobacter faecis
Pathway
afc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:afc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AFAEC_0853 (tssI1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:afc02044]
    AFAEC_0853 (tssI1)
Secretion system [BR:afc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AFAEC_0853 (tssI1)
SSDB
Motif
Pfam: Gp5_trimer_C Phage_GPD Phage_base_V DUF6484 Synaptobrevin
Other DBs
NCBI-ProteinID: QKF73028
LinkDB
Position
complement(831917..834448)
AA seq 843 aa
MQNLNFLKDQIKDIKDTIMNNQKEIQEIKGRLKLLNYKSNDLYGNTDGNYSIYNLEGKSG
VNKVYEYEITFISNERIEVEDIVDTDVEIVLEDLVNLKSCKTIFGKIYKASEDSIVSNKY
MYKIEVVHPIYYLGLNNKYEIYHSLSATDIINKIVTRYRALLNISLEIRVDNIKYPIKDY
TTQYNQSDLEFILMLCEEEGYSLIFKEDDNSSFKIVLCELNDYVEKIDSKILCTYNHKIE
FKASKHIEDYYDKNNPSQEYKIEKTKVVTSSKIKDNASSKQLRNDIEKESFRDKLNLLNE
SLYEDLNRYTNIDTNKEYSQSNIIEAVSNELIVKDSLNALIVSEKENKEEDVIIIEVNYK
AYFPNALEEYSKLNDIKDINSNMQYSVEFKAIPKDIIYKPKVTIKKPKIYGVQTAIVSSQ
DVNNSPINQNQNSIDVDEEGRVRVLFHFERNKTTSCYLRVSNLSSGNNYGSQFIPRVNSE
VIVSFVNGNPDCPIIIGTLYNGENKIPYPLPANKTKSYIRTYTTPQYENEEGYNEILFED
KQGNEELNIKAQKDMNTLILNDETKIVKHNQSNLIENDKKEDVNNNSNLNVKSDYTINVN
KNLIQTVEEEKITTVNKDYNIYANKDFNILVKDNLNIFVEENITTTIKNILHTYVEKNKQ
DKFLQNLYLEILEDYGLEISNSLHITSNHVKYEAKEELDLDAYNEVVLRCGNHSLSINSS
GVHFHTSNYNSNSPYSGVVANEVGVEGEVINLRLNNEEDEFISKYIKDSGKVKLNADTTL
KEGRNVQTTLFILDNNKNILAKETLLATVKNTKISKDFDIESLIKSHNIDFKDIDKIYGE
IEW
NT seq 2532 nt   +upstreamnt  +downstreamnt
atgcaaaatctaaattttctaaaagatcaaataaaagatatcaaagatacgataatgaat
aatcaaaaagagattcaagagataaaaggaaggttaaaacttttaaactataaaagtaat
gatttatatgggaatacagatgggaattattcaatctataatttagaagggaaaagtgga
gtaaataaagtatatgaatatgagataacctttataagtaatgaaagaatagaagtagaa
gatatagtagatacagatgtagagatagttttagaggatttagtaaatttaaaatcttgt
aaaacaatctttggaaagatttataaagctagtgaagatagtatagtatcaaataaatat
atgtataaaatagaagtggtacatccaatatactatttgggattaaataataaatatgag
atatatcatagtctaagtgcaacagatattataaataaaatagtaacaagatatagagcc
ttattaaatatttcattagagataagagtagataatataaaatatccaataaaagattat
acaacccaatataatcaaagtgatttagagtttatcttaatgctttgtgaagaagaggga
tactctttaatatttaaagaagatgataatagtagctttaaaatagtattgtgtgaatta
aatgattatgtagagaaaatagatagtaagatattgtgtacatataatcataaaatagag
tttaaagcaagtaaacatatagaagattactatgataagaataatccaagccaagagtat
aaaatagagaaaacaaaggtagtaactagtagtaagataaaagataatgcaagtagtaaa
caattaagaaatgatatagaaaaagagagctttagagataaactaaacttgttaaatgaa
agcttgtatgaagatttaaatagatacacaaatatagatacaaataaagagtatagtcaa
tcaaatataatagaagcagtttcaaatgaattaatagtaaaagatagtttaaatgcctta
atagtaagtgaaaaagagaataaagaagaagatgtaataataatagaagtaaactataaa
gcatactttccaaatgccttagaagagtattcaaaactaaatgatataaaagatataaac
tcaaatatgcaatatagtgtagagtttaaagcaatcccaaaagatataatatataaaccc
aaagttacaataaaaaaaccaaagatatatggagtacaaacagcaatagtaagctctcaa
gatgtaaataactcaccaataaaccaaaatcaaaatagtatagatgtagatgaagaagga
agagtaagagttctgtttcattttgaaagaaataaaacaacctcttgttacttaagagta
tcaaatctatctagtggaaataattatggctcacaatttattccaagagtaaatagtgaa
gtaatagtaagctttgtaaatggtaacccagattgcccaataataataggaactttgtat
aatggtgagaataaaataccttacccactcccagctaataaaacaaaaagctatataaga
acatatacaactcctcaatatgaaaatgaggaaggatataatgaaatactctttgaagat
aaacaaggaaatgaagagttaaatataaaagctcaaaaagatatgaatactctaatacta
aatgatgagacaaaaatagttaaacataatcaaagtaatctaatagagaatgataaaaaa
gaagatgtaaataataactcaaacttaaatgtaaaatcagactatacaataaatgtaaat
aaaaacctaatacaaactgtagaagaagagaaaataacaactgtaaataaagattataat
atctatgctaataaagattttaatattttagtaaaagataatctaaatatctttgtagaa
gaaaatataacaactacaataaaaaatatactacatacttatgtagaaaaaaataaacaa
gataagtttttgcaaaacctatacctagagatattagaagattatggattggaaataagt
aatagtcttcatataacatcaaatcatgttaaatacgaagcaaaagaagaactagaccta
gatgcttataatgaagtggtattaagatgtggaaaccattcactttcaataaatagtagt
ggagtacattttcatacttcaaactacaatagtaatagtccttatagtggggtggtggct
aatgaggttggagttgaaggagaagttataaatttaagattgaataatgaagaagatgaa
tttatttcaaaatatattaaagatagtggtaaagtaaaattaaatgcagatactacatta
aaagaaggaagaaatgtacaaactactttatttatattagacaataataaaaatatatta
gcaaaagagactcttttggcaactgtaaaaaatacaaaaattagtaaagattttgatata
gaatctcttataaaatcacataatattgactttaaagatatagataaaatttatggagaa
atagaatggtaa

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