Aliarcobacter faecis: AFAEC_0876
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Entry
AFAEC_0876 CDS
T06664
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
afc
Aliarcobacter faecis
Pathway
afc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AFAEC_0876 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afc03400
]
AFAEC_0876 (priA)
Enzymes [BR:
afc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AFAEC_0876 (priA)
DNA repair and recombination proteins [BR:
afc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AFAEC_0876 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
PriA_3primeBD
AAA_19
Ago_PAZ_arc
Zn_ribbon_6
zf-C3HC4_3
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
QKF73051
LinkDB
All DBs
Position
860363..862210
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AA seq
615 aa
AA seq
DB search
MNYYEVAILKSPLENLTYQSEDFIEEGDLVEVILANRKNSNQAVIIKKVEKPEFKCSDIL
KVTDFYYSSFMLEIADFISKYYVCSLGQSLSIFQYFDKNIKYENRKIEFKKEISLSSFQQ
EAKEFLDSKKQSLLFAKTGAGKTEIYIKTIKEILSLDKQAVFLMPEISLTPQMQKRLEEV
FGNSIAIWHSKVGVKKRKEILQNLQNGTIKLIAGARSALFLPYKDLGLIIVDEEHDDSYK
SDQTPRYNAKDLSIFIAKKFDLKLILGSATPSINSFHKIAYFELDKTFYETQKRYIFENL
SQKISQNTLKKIEDTIKNGNQTIVFLPTRANFKHQICFDCGKSVECPFCSVSMSLHKNDL
ALKCHYCGFAQKIPEFCPSCKTGIIKNHRVGTAEIEEILKEEFPKNVIKRFDTDTIKNEK
ILKTTLEEFNENKIDVLVGTQMLSKGHDYHNVKLAVVLGIDSLLNMNSYKAREKALSLLI
QIAGRSGRNGFGEVLIETKNEDFFKHYLEESNYLEFLQSELEFRKDLYPPFVKLARVVLS
STNGLKIKDELSQIVKYLKTIKDIEVVGFGECAIFKIANKYRYEILIRSKNSKELLKALH
SIKSAHILIDMDTIY
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaactattatgaagtagctattttaaaatctcctttagaaaatcttacttatcaaagt
gaagattttatagaagagggagacttagttgaagttattttagcaaatagaaaaaactca
aatcaagctgttattataaaaaaagtagaaaaaccagagtttaaatgtagtgatatttta
aaagtaacagatttctattatagctcttttatgttagaaatagcagattttataagtaag
tattatgtttgttctttggggcaaagtttatctatttttcaatactttgacaaaaatatc
aagtatgaaaatagaaaaatagagtttaaaaaagagataagtttatcaagttttcagcaa
gaagcaaaagagtttttagatagtaaaaaacaatctttactttttgcaaaaactggtgct
ggaaagactgaaatatatataaaaactataaaagagattttaagtttagataaacaagct
gtttttttgatgccagaaatctctcttactcctcaaatgcaaaaaagacttgaagaggtt
tttggaaacagtattgcaatttggcactcaaaagtaggagttaaaaagagaaaagagatt
ttacaaaatcttcaaaatggaacaataaaattaatcgcaggagctagatcagcacttttt
ttaccatacaaagatttagggttaattatagttgatgaagagcatgatgattcatataaa
agtgatcaaactccaagatataatgcaaaagatttgagtatttttatagctaaaaaattt
gatttaaaactcattttaggaagtgcaacaccttctataaatagttttcataagatagca
tattttgaactagataaaactttttatgaaacacaaaaaagatatatttttgaaaactta
agccaaaaaatctcacaaaatacacttaaaaagattgaagatacaataaaaaatggtaat
caaacaatagtttttttaccaacaagagcaaattttaagcatcaaatctgttttgattgt
gggaaaagtgttgagtgcccgttttgtagtgtttctatgagtttacataaaaatgattta
gctttaaagtgtcattattgtggttttgcccaaaaaattccagaattttgcccatcttgt
aaaactgggattattaaaaatcatagggttggaactgcagaaatagaagagattttaaaa
gaagagttccctaaaaatgttataaaaagatttgatacagatacgataaaaaatgaaaaa
attttaaaaacaacacttgaagagtttaatgagaataaaattgatgttttagttggcact
caaatgctttcaaaagggcatgattatcataatgtaaaattagctgttgttttaggaatt
gatagtttactaaatatgaactcttacaaagcaagagaaaaagctctatctttacttatt
caaatagctggtagaagtggaagaaatggttttggagaggtattaatagagacaaaaaat
gaagattttttcaaacactatttagaagagtcaaattatttagagtttttacaaagtgaa
ttagagtttagaaaggatttatatccaccttttgtaaaattggcaagagtggtactctct
tcaacaaatggtttaaaaataaaagatgagttaagccaaattgtaaaatatttaaaaact
ataaaagatattgaagttgtaggttttggagagtgtgcaatttttaaaatagcaaataaa
tataggtatgaaattttgattcgttcaaaaaattcaaaagagcttttaaaagcacttcac
tcaataaaatcagcacatattttaatagatatggatacaatttattaa
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