Aliarcobacter faecis: AFAEC_0951
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Entry
AFAEC_0951 CDS
T06664
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
afc
Aliarcobacter faecis
Brite
KEGG Orthology (KO) [BR:
afc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afc03400
]
AFAEC_0951 (phrB)
Enzymes [BR:
afc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AFAEC_0951 (phrB)
DNA repair and recombination proteins [BR:
afc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AFAEC_0951 (phrB)
Prokaryotic type
AFAEC_0951 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF4250
DUF6115
AAA_31
Motif
Other DBs
NCBI-ProteinID:
QKF73126
LinkDB
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Position
939435..940787
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AA seq
450 aa
AA seq
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MKQILWFRRDLRVVDSEILANAKGEVLPIFIFDKNILEKLSKEDKRVTFIYKSVNELKES
LKKIGLDLAIFFDIPKNVFTKLKQEGFSEILTSIDFDFYAKKRDEEVERILPLRRFLDSF
LIDPKDILKSDKTPYKVFTPFYNSLEPLHQSNSIKEFEISKNIKKVDFDYSFIPTLEDLG
FIEQKLPDFLYKSADELIEDFSKKLNSYQENRDYIYLDAGSKLSVHLRFGLISPKMIFNR
VKKLQVSKKEINFFIRELIWREFYNYILYHFPQSEFENLNKIEVNWSQNDENFKKWCEGK
TGVPIIDAAMRYFNNTGLMHNRLRMIVASYLVKNLLIDWKKGENYFAQKLLDYEKSSNIG
SWQWAASTGVDAVPYFRVFNPYLQSKKFDANAVFIKSILKELKDIPVKLIHIENGVQENI
FLDYPKQIIGISTSRNRAILEFKRANSEKF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaattttatggtttagaagagatttaagagtagttgatagtgagatattggca
aatgcaaaaggtgaagtgctaccaatatttatttttgataaaaatattttagaaaaactc
tcaaaagaagataaaagagttacatttatctataaaagtgttaatgaactaaaagagagt
ttgaaaaagattgggcttgatttagcaatattttttgatatacctaaaaatgtctttaca
aaattaaaacaagaggggtttagtgaaattttaacctctattgattttgacttttatgca
aaaaaaagagatgaagaagtagagaggattttacctcttagaagatttttagattcattt
ttgattgatccaaaagatattttaaaaagtgataaaacaccatataaagtttttacccct
ttttataactctttagaacctttacatcaatcaaattctataaaagagtttgaaatctct
aaaaatataaaaaaagtagattttgattatagctttattccaactttagaagatttggga
tttatagaacaaaaattaccagattttttatataaaagtgcagatgagttgatagaggat
ttttcaaaaaaacttaactcttatcaagaaaatagagattatatatatttagatgcaggt
tcaaagctctcagtacatctaagatttggattaatttcacctaaaatgatttttaataga
gtaaaaaaactacaagtaagtaaaaaagagataaatttttttataagagagcttatttgg
agagagttttataactatattttgtaccatttcccacaaagtgagtttgaaaacttaaat
aagatagaggtaaattggagtcaaaatgatgaaaactttaaaaaatggtgtgaaggaaaa
acaggagttcctataatagatgctgctatgagatattttaataatacaggacttatgcac
aatcgtctaagaatgatagtagcctcatatttagttaaaaatttgttaatagactggaaa
aaaggtgagaactattttgcacaaaaacttttagattatgagaaaagttcaaatattggt
tcttggcaatgggctgcaagtacaggagttgatgcagtaccatattttagagtttttaat
ccctatttacaatcaaaaaaatttgatgctaatgcagtttttataaaaagtattttaaaa
gagttaaaagatattccagtaaaattaatacatatagaaaatggggttcaagaaaatatt
tttttagattacccaaaacagattattggaatctcaacttcaagaaatagggctatttta
gagtttaaaagagcaaatagtgaaaagttttaa
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