Aliarcobacter faecis: AFAEC_1020
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Entry
AFAEC_1020 CDS
T06664
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
afc
Aliarcobacter faecis
Pathway
afc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
afc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AFAEC_1020 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afc03021
]
AFAEC_1020 (rpoA)
03400 DNA repair and recombination proteins [BR:
afc03400
]
AFAEC_1020 (rpoA)
Enzymes [BR:
afc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AFAEC_1020 (rpoA)
Transcription machinery [BR:
afc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AFAEC_1020 (rpoA)
DNA repair and recombination proteins [BR:
afc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AFAEC_1020 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QKF73188
LinkDB
All DBs
Position
1005195..1006193
Genome browser
AA seq
332 aa
AA seq
DB search
MKKFAETPFLPTEVEIEAISENEAKISAYPFEDGFAITLAHPLRRLLLSSSVGYAPIAVK
IEGATHEFDSLRGMLEDVAIFVINLKNIKFKINGDKKQVVVEYTFNGPRDIKGEDLINSE
VDVVSKDAHLATINSDCNLTFSVIIQKGIGYMPSEDIRDIVGPDYIPIDAFFTPVKKVVY
DIEKMLVEDNPNFEKAVFRVLTNGQITPIAAFKEAVSVMYSQMSVFNKVFDLSEITVSES
GEESVEIKELVQRIEELNLSARSFNSLDRAGLKYLGELVLMSEVEVKNIKNLGKKSYDEI
AEKLESLGYPVENTLPENVASVLRRKLEQLKA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttgcagaaactccatttttaccaactgaagttgagatagaagctatcagc
gaaaatgaggctaaaatatcagcatacccatttgaagatggttttgcaattactttggca
caccctttaagaagacttcttttgagctcatcagttggatatgctccaattgctgtgaaa
atagagggtgctactcatgagtttgactcattaaggggtatgttagaagatgtagctatt
tttgttattaatttaaaaaacataaagtttaaaattaatggtgataaaaaacaagttgtt
gttgaatatacatttaatggaccaagagatattaagggtgaagatttaattaactctgaa
gttgatgttgtttcaaaagatgcacatttagcaacaattaatagcgattgtaacttaaca
ttctctgttattattcaaaaaggtattggttatatgccttctgaagatattagagatatt
gttgggcctgattatataccaattgatgcattctttacacctgtaaaaaaagtggtttac
gatattgaaaaaatgttagttgaagataatcctaactttgaaaaagctgtatttagagta
ttgacaaatggtcaaattacaccaatagctgcatttaaagaagcagttagtgttatgtat
tctcaaatgtcagtatttaataaagtatttgatttatcagaaataactgtaagtgaatca
ggtgaagagtctgttgagattaaagagttagttcaaagaattgaagaactaaatttaagt
gctagaagtttcaactctttagatagagcgggacttaaatatttaggtgaactagtactt
atgagtgaagttgaagttaaaaatattaaaaatctaggtaaaaaatcttatgatgaaata
gctgaaaaactagagtcattaggatacccagttgaaaatacacttccagagaatgttgct
tctgtattaagaagaaaattagagcaacttaaagcataa
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