Aliarcobacter faecis: AFAEC_1045
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Entry
AFAEC_1045 CDS
T06664
Name
(GenBank) helicase, RecD/TraA family (non-RecBCD)
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
afc
Aliarcobacter faecis
Pathway
afc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AFAEC_1045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afc03400
]
AFAEC_1045
Enzymes [BR:
afc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AFAEC_1045
DNA repair and recombination proteins [BR:
afc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AFAEC_1045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
HHH_RecD2
AAA_19
UvrD_C_2
SH3_13
Viral_helicase1
OB_YrrC
HHH_5
PIF1
Mg_chelatase
PhoH
AAA
AAA_22
Ribosomal_S13
T2SSE
AAA_5
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QKF73213
LinkDB
All DBs
Position
1031108..1033408
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AA seq
766 aa
AA seq
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MTETSEKKYNLSGVLKKVLYKNDETKYIIAVLENNQKICGTYFDADIEKIVGEEIIMSGD
WTTHNKYGVQFEFDTLQIKEHELFFFLTKIVKGFTKKLANEILDKYSEDGLIEILENNPN
ELLNFKGIKEKKLKTILSSWHSFKHLRELGAFLGKFGVTSNLITKIYSTFSEVDNLIEKI
KQNPYILINIKGIGFKRADEIAKSLGIDLKSEFRIRACVNYTLREFCDNNGNSSIDKFHL
YKLLDDSLRFSNEEILYENVLTKMLAKEEIYSTNQNRVALSMLYFAEKNILEFFNRRKDD
KNRKIIEKFDEYLSKKQESLGFSLSDEQKKAVELINSGEKTLFLIGYAGTGKSTSSRAIL
ELLEEIMSYDDIITIALSGIASQRISDTTGYNSSTIQSLLVKHKEKDFFPYKVILLDEAS
MVNSVTFYQIISKISDDTIFIIVGDDGQLPAIGAGNILADSIKFELAPICKLTKIYRQNE
NQAIAIIANDIRKGELPNYKEDYEDFKFVDVSISNYYSIKNSLSQNEFSNIRGENSEYIL
NNILNIASDYIQLYYDFIKEKNIGKALTLFQVITPMKGGVLGVENLNIELQRLFNHTKTK
SLKIKDFEYKLTDKVIHIKNENMKAQTMSMYKSNSTEFMERRVYNGQLGLIIKIDFDEQK
CIVLYPNDDMVVFYDFDNIHNLLNLAYCLTIHKTQGMEYENALIPMTFSHYIMHNTKLLY
TAITRAKKMCFIVGEEEAFKSACKKIEVTIRESIINDLLSKNNKIE
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaactagtgaaaaaaagtataacttaagtggggttttgaaaaaagttctctat
aaaaatgatgaaacaaaatatattattgcagttttagaaaataatcaaaaaatttgtgga
acatatttcgatgctgatattgaaaaaatagtaggtgaagagataataatgagtggagat
tggacaactcataataaatatggggttcaatttgagtttgatactctacaaataaaagag
cacgaactttttttctttcttacaaaaattgtaaaaggatttactaaaaaacttgcaaat
gagattttagataaatatagtgaagatggattgatagagattttagagaataatccaaat
gaactactaaattttaaaggaataaaagagaaaaaattaaaaacaattttaagctcttgg
cactcttttaaacacttaagagaacttggtgcttttttaggaaaatttggtgtaacttca
aatttaattacaaaaatatattcaacttttagtgaagttgataacttaatagaaaaaatt
aaacaaaacccatatattctaataaatataaaaggaataggatttaaaagagctgatgag
atagcaaagtctttaggaattgacttaaaatcagagtttagaataagagcttgtgtaaat
tatactttaagagaattttgtgataacaatggaaactcatctatagataaatttcatctt
tataaattattagatgatagtttgaggttttcaaatgaagagatactttatgaaaatgtt
ttaacaaaaatgttagcaaaagaggagatttatagcacaaatcaaaatagagttgcttta
tcaatgttatattttgcagaaaaaaatattttagagttttttaatagaagaaaagatgat
aaaaatagaaaaattattgaaaaatttgatgaatatttaagtaaaaaacaagaaagtttg
ggtttttctttaagtgatgaacaaaaaaaagcagttgaacttataaactctggagagaaa
actctctttttaataggttatgcaggaacaggaaaatcgacatcaagtagagctatttta
gaacttttggaagagataatgagttatgatgatattataactattgcactatcaggaatt
gcaagtcaaagaataagtgatacaacaggttataattcaagtactattcaaagtctgctt
gtaaaacataaagagaaagattttttcccatataaagttatattacttgatgaagcatct
atggtaaattctgttactttttatcaaattatctcaaaaataagtgatgatacaattttt
ataattgtcggagatgatggccagttaccagctattggagctggaaatatattagctgat
agtataaaatttgaacttgcaccaatatgtaaacttacaaaaatttatagacaaaatgaa
aatcaagcaattgcaataattgcaaatgacattagaaaaggtgaattaccaaattataaa
gaggattatgaggattttaaatttgttgatgtctctatttcaaattattattctattaaa
aactcgttgagtcaaaatgaattttcaaatattagaggtgaaaatagtgaatatatttta
aataatattttaaatatagcaagtgattatattcaactctattatgattttataaaagag
aaaaatattggtaaagctttaactctttttcaagtaattacaccgatgaaaggtggtgtt
ttaggagttgaaaatttaaatatagagttacaaaggctctttaatcatacaaaaacaaag
agtttaaaaataaaagattttgagtataaattaacagataaagtaattcatataaaaaat
gaaaatatgaaagcccaaactatgagtatgtataaatcaaactccactgaatttatggag
agaagagtttataatggacaattaggacttataataaagattgattttgatgagcaaaaa
tgtatagttttatatccaaatgatgatatggttgtattttatgactttgataatattcat
aatcttttaaatttggcatattgtctaacaattcacaaaactcaaggaatggaatatgaa
aatgctctaattcctatgactttttcacactatattatgcataatacaaaacttttatat
acagcaattacaagagctaaaaaaatgtgttttattgttggagaagaggaagcctttaaa
agtgcttgtaaaaaaatagaagtaacaataagagaatcaattataaatgatttgttaagt
aaaaataataaaattgagtaa
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