Aliarcobacter faecis: AFAEC_1517
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Entry
AFAEC_1517 CDS
T06664
Symbol
truD
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
afc
Aliarcobacter faecis
Brite
KEGG Orthology (KO) [BR:
afc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afc03016
]
AFAEC_1517 (truD)
Enzymes [BR:
afc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AFAEC_1517 (truD)
Transfer RNA biogenesis [BR:
afc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AFAEC_1517 (truD)
Prokaryotic type
AFAEC_1517 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
FERM_F2
Motif
Other DBs
NCBI-ProteinID:
QKF73675
LinkDB
All DBs
Position
complement(1494965..1496038)
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AA seq
357 aa
AA seq
DB search
MKLQRYLNHSSIDVVFKQSKDDFVVNEVPLYEFSGEGEHLILKLRKKDLATWDAIEILAN
YLKCSTREFGYAGLKDKNAMTVQHISVHRKYEEILKEFSHENIKILETTYHNNKIKIGHL
KGNNFFIRLKRVGLVEKRKIEEAFSKIATFGMPNYFGFQRFGIDGENYKKGKAIVEGTLK
ERNRNLKQMFINAYQSYLFNSWLSKRIEISKLIEAFEPKEIYTKLNLPLEEVKRAKKQPH
PFKILTGDLFSHYPFGKIFIIDDLEAESQKFFDKDRVPTGLLSGKRVKKSENFAQEIEKE
FEVDMNEDGARRFAFIFPENLESNYKEDKNHMELSFYLPKGSYATELIAEILHKELS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactacaaagatatttaaaccactcaagcattgatgtggtttttaaacaaagtaaa
gatgattttgtggtaaatgaagtaccactttatgagtttagtggagagggtgaacatctt
attttaaaacttagaaaaaaagatttggcaacttgggatgctattgaaattttggcaaat
tatctaaaatgtagcactagagagtttggatatgcaggattaaaagataaaaatgctatg
actgttcagcatatttcagttcacagaaaatatgaagagattttaaaagagttttcacat
gagaatattaagattttagagacaacttatcataataataagataaaaatagggcattta
aaagggaataacttttttataagacttaaaagagttgggcttgttgaaaaacgaaaaatt
gaagaagcattttctaaaattgctacttttggaatgccaaactattttggatttcaacga
tttggaattgatggagaaaactataaaaaaggaaaagctatagttgaaggaactttaaaa
gagcgaaatcgaaatcttaaacagatgtttataaatgcttatcaaagctatttgtttaac
tcttggctttcaaaaagaatagagatttcaaaattaatagaggcttttgaaccaaaagag
atttatactaaattaaatcttccacttgaggaggtaaaaagagcaaaaaaacaaccccat
ccttttaaaatattaactggagatttatttagtcattatccatttggaaagatatttata
attgatgatttagaggctgaaagccaaaaattctttgataaggatagagttccaacaggg
cttttatctggaaaaagagtaaaaaaatctgaaaattttgcacaagagatagaaaaagag
tttgaagtagatatgaatgaagatggtgctagaaggtttgcttttatttttcctgaaaat
ttagagagtaattataaagaggataaaaatcatatggaacttagtttttatcttccaaaa
ggctcttatgcaacagaacttatagctgaaattttacataaagagttaagttaa
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