Aliarcobacter faecis: AFAEC_1956
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Entry
AFAEC_1956 CDS
T06664
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
afc
Aliarcobacter faecis
Pathway
afc03030
DNA replication
afc03430
Mismatch repair
afc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AFAEC_1956 (dnaX)
03430 Mismatch repair
AFAEC_1956 (dnaX)
03440 Homologous recombination
AFAEC_1956 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afc03032
]
AFAEC_1956 (dnaX)
03400 DNA repair and recombination proteins [BR:
afc03400
]
AFAEC_1956 (dnaX)
Enzymes [BR:
afc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AFAEC_1956 (dnaX)
DNA replication proteins [BR:
afc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AFAEC_1956 (dnaX)
DNA repair and recombination proteins [BR:
afc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AFAEC_1956 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_30
AAA_19
AAA_14
AAA_assoc_2
AAA_5
Sigma54_activ_2
DEAD
AAA_24
TIP49_C
Mg_chelatase
ResIII
AAA_16
APAF1_C
Motif
Other DBs
NCBI-ProteinID:
QKF74107
LinkDB
All DBs
Position
complement(1948894..1950819)
Genome browser
AA seq
641 aa
AA seq
DB search
MIDNNLKDRVLALKYRPRRFEDLIGQSTVSQTLSLALDSSRLSHAYLFSGLRGSGKTSTA
RIMAKALLCEKGPTSKPCEVCENCLSANSGKHLDIIEMDAASNRGIDDIKELIEHTKYKP
SLARFKVFIIDEVHMLTTQAFNALLKTLEEPPGFVKFILATTDALKLPATILSRTQHFRF
NKISQNDVVHHLSHILHEEKIEFDKEALNILARGGQGSLRDTLTLLDQAIIFSKNKVFAQ
SVVEMLGLINPEKMESIFMMILNKGDINDILKELEIYETSQIIDEMTLYLKDKMILKDRR
FDIVVFDRFFRILSDAKHLLAINSDGTFVLILTFMKLMEATKLKSIDDIINQIEKIEAKV
EVVKPVKVVEILKEEINIEDIKEEKIVEKVEEKVDEEKKEEIYQTSTNITSLDILDSIPK
LEFETPFDELPKVAPISQIIQQEIIEKEIVNEDKKEVEIEEFSYSATEDIEYIPFVDESD
ESSDLYTKLTEKVYDRDFELGECFEKNFIYNGFSNNVLQIISYAKDEERKLLYKHFPIIK
AFAQEVYGSNVELDFKKEDATILNDSIKKEQIEENILSDSDIGSMIEDIEIGSGCVADMT
KSSNETLSSRELQINDILNSKMVDKVKELFDIRKITVKSRS
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgattgataataatttaaaagatagagttttagctttaaagtatagaccaagaagattt
gaggatttaataggacaaagtacagtctctcaaactttaagccttgctcttgatagttca
agattatctcatgcctatttattctcaggtcttagaggaagtggaaaaacttcaacagcc
cgaattatggcaaaagctcttttatgtgaaaaaggaccaacttcaaaaccttgtgaagtt
tgtgaaaattgccttagtgcaaatagtggaaaacatcttgatattatagagatggatgct
gctagtaatagaggaattgatgatataaaagagttaattgaacatacaaaatataaacca
agtcttgctagatttaaggtttttattattgatgaagttcatatgcttacaacacaagca
tttaatgctttactaaaaactcttgaagagcctccaggatttgtaaaattcatacttgca
acaacagatgctttaaaactacctgcaacaattttaagtagaactcaacattttagattt
aataaaatttctcaaaatgatgttgttcaccatttaagccatattttacatgaagagaaa
atagagtttgacaaagaggctttaaatatattagcaagaggagggcaaggtagtttaaga
gatactttaactcttcttgaccaagcaataattttttcaaaaaataaagtattcgctcaa
agtgttgttgagatgttaggtttaattaatcctgaaaaaatggaatcaatatttatgatg
attttaaataaaggtgatattaatgatattctaaaagagttggaaatttatgaaacaagt
caaataatagatgagatgactttatatttaaaagataaaatgattttaaaagatagaaga
tttgatattgttgtttttgatagattctttagaattttaagtgacgcaaagcatttatta
gcaataaatagtgatggaacttttgttttaattttaacttttatgaaattaatggaagct
acaaaactaaaatcaatagatgatattataaatcaaattgaaaaaattgaagcaaaagtt
gaagttgtaaaacctgtaaaagtggttgaaatactaaaggaagaaataaatattgaagat
ataaaagaagagaagatagttgaaaaagttgaagaaaaagtagatgaagagaaaaaagag
gagatttatcaaacttcaacaaatataacttctttggatattcttgattcaattcctaaa
ttagaatttgaaacaccttttgacgaactcccaaaagttgctcctatttcacaaattata
caacaagagattattgaaaaagagatagttaatgaggataaaaaagaagttgagattgaa
gagttttcttattctgctactgaagatatagagtatataccttttgttgatgaaagtgat
gaatcaagtgatttgtatacaaaattaactgaaaaagtttatgatagagattttgaattg
ggagagtgttttgaaaaaaactttatttataatggtttttcaaacaatgttttacaaatt
atctcttatgcaaaagatgaagaacgaaaacttttatataaacattttccaataattaaa
gcttttgctcaagaggtttatggttctaatgttgagctagattttaaaaaggaagatgcc
accatattaaatgactctataaaaaaagagcagattgaagaaaatattttaagtgatagt
gatattggttctatgatagaggatattgaaattggttcaggatgtgttgctgatatgaca
aaaagttcaaatgagactttatcatcaagagagttacaaattaatgatattctaaattca
aaaatggtggataaggtaaaagaactttttgatattagaaaaattacagtaaaatcacga
agttaa
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