Aliarcobacter faecis: AFAEC_a0065
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Entry
AFAEC_a0065 CDS
T06664
Name
(GenBank) putative exonuclease SbcCD, C subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
afc
Aliarcobacter faecis
Brite
KEGG Orthology (KO) [BR:
afc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afc03400
]
AFAEC_a0065
DNA repair and recombination proteins [BR:
afc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AFAEC_a0065
Archaeal homologous recombinant proteins
AFAEC_a0065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QKF74510
UniProt:
A0A6M8MUF9
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All DBs
Position
pAFAEC:complement(70885..74475)
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AA seq
1196 aa
AA seq
DB search
MKILKVKSLNINSLKGEFEVDFEKFLKDESLFAITGPTGAGKSTILDVITCALYGRTARL
TNPNELMSRHTGECLCEVEFEVKGKVYRSSWSQKRARKSPEGAFQSAKMELSVVESGKIL
ESLISKVPKYIEDLCGLDFKRFSKSMMLSQGSFDAFLKADINERSTLLENITGTQIYKQI
SQEIYQTYTRKNDEIKLDENLLGNIELLSNEVVSEKTSILNSSKAQKLEFDSKGNELKKV
INWLENLQKLEADNTKYIQEFEQISLEKENKKEEFIKLDLANKALNVQPIYQEKNSLTQI
INQDKEKLEKLQKELIELKQQLELKTNESLKSKDELDKEKVSFDTNSKKLQEVRTLQTKI
ESKLQNIKELDNKISSQNEQKTKLNEDLKVLKINQEKIDNELKTINDYLIKNKDDESLKE
EISLISKNVNDYKDVLKLLKQIEEKIQNNSLDEKTLQDSFTKAKKEFDEIKVLFDSKDKE
YKDLEIQASNFNKKELNNRDRLKSIEKLIISIDEYKRLLESILKEENIISSSKDELKTIK
TNIEEKTKLITEIQTHIQTLNDKREAELLIAKYESDRANLKEGEECFLCGSKEHPFVNHK
ISVNTDETTSIIAQKKQIFDEENRALRTIELNLSKLETKIESSTLELNKLSKNKEDIEQV
FSSLNFVLTDDSKTNLEEEKQLLEDELRNIVKIRDEKEKVLIQRDNLQKELNTKQTFVLQ
NEQELYKLKSSIEQLQNEQIQNISKKQSLEEELSKVYSKYEFIFDEKFEESFRNLVAKKD
SFIKNETSKKELDAKLQSLTIQLKEFDTKIKSIESNLKTDDEQLSKISNETIELQTQSKA
ILDVSDLNIFEKDITSKFNTINERYNSLLKELININSKNESLNTQIKELNQKQINDNIKF
EEITQKFNNALAENSFSSKEEFEKALLSKELREELSMRCKDLEEKYTQVETLKIDTAKKL
SEQKELNLTDKELQTLNEELKELQTSIDELQKSIGSLEKELEINASNMKKHEDKIKELEN
KKEAFKVWIKLNEMIGSASGDKFAKFAQGITLDQLIYLANKHLQILSPRYELQRSSDSSK
LLEIEIIDGFQGDVVRPVSTLSGGESFIVSLSLALGLSALASQKISIDSLFLDEGFGTLD
SDSLELALNALNQLQSSGKMVGVISHVEALKERISLQIRVTPKGDGTSVLNLSNLI
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattaaaagtaaaatcattaaatattaactcactaaaaggtgagtttgaagta
gactttgaaaagtttttaaaagatgaatctttatttgctattactggaccaactggtgct
gggaaaagtacaattttagatgtaattacttgtgctttatatggaagaactgcaagactt
acaaatccaaatgaacttatgagtagacacacaggtgaatgtctatgtgaagttgaattt
gaagtaaaaggaaaagtttatagaagttcttggagtcaaaaaagagctagaaaaagtcct
gaaggagcttttcaaagtgctaaaatggaattgagtgttgttgaatcagggaaaatttta
gaatcacttatttcaaaagtacccaaatatatagaagatttatgtggtcttgattttaaa
agattttctaaatcaatgatgttatctcaaggaagttttgatgcatttttaaaagctgat
ataaatgaacgatcaactttacttgaaaatattactggaacacaaatttataaacaaata
tcacaagaaatatatcaaacttatactagaaaaaatgatgagattaaattagatgaaaat
ttattaggaaatattgaattattgtcaaatgaagttgttagtgaaaagacatcaatttta
aatagttcaaaagctcaaaaacttgaatttgattctaaaggaaatgagctaaaaaaagta
attaattggcttgaaaatttacaaaaattagaagctgataatactaagtatattcaagag
tttgagcaaatcagtcttgaaaaagagaataaaaaagaagagtttataaaattagattta
gcaaataaagctttaaatgttcaaccaatttatcaagaaaagaactctttaactcaaata
ataaatcaagataaagaaaaactagaaaaacttcaaaaagaactaatagagttaaagcag
caattagagttaaaaactaatgaatctttaaaatcaaaagatgaactagataaagaaaaa
gtttcatttgatacaaactctaaaaagcttcaagaagtaagaacactacaaactaaaata
gaatcaaaacttcaaaatatcaaagagttagataataaaataagctctcaaaatgaacaa
aaaactaaactaaatgaagatttgaaagttctaaaaataaatcaagagaagattgataat
gagttaaaaactataaatgattatctaattaaaaataaagatgatgaatcattaaaagaa
gagatatctttaatctcaaaaaatgtaaatgattataaagatgtactaaaacttttaaaa
caaatagaagaaaaaattcaaaataacagtttagatgaaaagactttacaagatagtttt
actaaggcaaaaaaagagtttgatgagataaaagtactatttgattctaaagataaagag
tataaagatttagaaattcaagcttcaaatttcaataaaaaagaattaaataatagggat
agattaaaaagtattgaaaaactaattatttctatagatgaatataaaagattgttggaa
tctattttaaaagaagaaaatatcatatcttcttcaaaagatgaattaaaaactataaaa
acaaatatagaagaaaaaacaaaactaataactgaaattcaaacacatatacaaactcta
aatgataaaagagaagcagaacttttaatagcaaaatacgagagtgatagagcaaatcta
aaagagggtgaagagtgtttcttatgtggttcgaaagaacatccatttgtaaatcataaa
ataagtgtaaatactgatgaaacaacttcaataatcgctcaaaagaagcagatatttgat
gaggaaaacagagctttacgaactattgaattaaacttatcaaaacttgaaactaaaata
gagagttctactttagaattaaataaattatcaaaaaataaagaagatatagaacaagta
tttagttcattgaattttgttttaacagatgattctaaaacaaacttagaagaagaaaag
caacttttagaagatgagttaaggaatatagtaaaaattagagatgaaaaagagaaagtt
ttaattcaaagagataatcttcaaaaagagctaaatactaaacaaacttttgttttacaa
aatgaacaagaactttataaactaaaaagttcaatagaacaattacaaaatgaacaaatt
caaaatatatctaaaaaacaaagtttagaagaagaactttcaaaagtttatagtaaatat
gagttcatatttgatgaaaagtttgaagaaagctttagaaatttagttgcaaaaaaagat
agttttattaaaaatgaaacatcgaaaaaagaacttgatgctaaacttcaaagtttgaca
atacaactaaaagagtttgatacaaaaatcaaatcaatagaatcaaatttaaaaactgat
gatgaacaactttctaaaatctctaatgaaacaatagaattacaaactcaaagtaaagct
attttagatgtatctgatttaaatatctttgaaaaagatataacaagtaaatttaatact
attaatgaaagatataactctttattaaaagagctaataaatataaattcaaaaaatgaa
tcactaaatactcaaataaaagagttaaatcaaaaacaaattaatgataatataaaattt
gaagagataacacaaaaattcaataatgccctagcagaaaatagtttcagttcaaaagaa
gagtttgaaaaagcacttttatcaaaagagttaagagaagagttatctatgaggtgcaaa
gatctagaagaaaaatatactcaagttgaaactttaaaaatagatacagcaaaaaaacta
tctgaacaaaaagagttaaacttaacagataaagaacttcaaactttaaatgaagagtta
aaagagttgcaaacttctattgatgaacttcaaaaatcaataggaagtttagaaaaagag
cttgaaatcaatgcttcaaatatgaaaaaacatgaagataaaatcaaagaattagaaaat
aaaaaagaagcctttaaagtatggataaaactaaatgaaatgataggttcagcaagtggt
gataaatttgcaaaatttgcccaaggtatcactttagaccaactaatctatctagcaaat
aaacatttacaaatattgagtccaagatatgaacttcaaagaagtagtgattcaagtaag
ctactagaaatagaaataatagatggttttcaaggggatgtagtaagacctgtaagtaca
ctttccggtggtgaaagcttcatagtaagtctttcattagcccttggactttctgcactc
gcaagtcaaaagataagtatagattcacttttcttagatgaaggatttggaacactagat
agtgatagtttagagttagcattaaacgcgctaaatcagttacaaagttcaggaaaaatg
gtaggtgtgatttcccatgtggaagcactaaaagagcgaatttcattacagattagggtt
acgcctaaaggagatgggacaagtgttttgaatttgagtaatttaatatag
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