Alistipes finegoldii: Alfi_0067
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Entry
Alfi_0067 CDS
T02133
Name
(GenBank) RNA polymerase sigma-70 factor, Bacteroides expansion family 1
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
afd
Alistipes finegoldii
Pathway
afd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Alfi_0067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afd03021
]
Alfi_0067
Transcription machinery [BR:
afd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Alfi_0067
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_ECF
Sigma70_r2
Sigma70_r4
HTH_30
HTH_AsnC-type
POTRA_TamA_1
HTH_23
GerE
HTH_28
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AFL76483
LinkDB
All DBs
Position
complement(78540..79124)
Genome browser
AA seq
194 aa
AA seq
DB search
MPERKKISDTCLLNRLVDGEMKAYEEIFVRYYPTLCTYARMYVKREETAENIVQDLMLWL
WENRTVLCISTSLPKYLFGAVRNNCLTYLGHESIERRVLGNIRNKMCEQFEVPDFDVVEE
LRENIRAAVADLPASYREAFEMSRFQRKTYEEIAAVLEVSPKTVDYRIQQCLKILRVKLK
DYLPLLTMLLVVNE
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacggaaaaagatatccgacacctgcttgctgaaccggttggtcgatggtgag
atgaaggcgtatgaagagattttcgtacgttattatccgactctctgcacctacgcccgc
atgtatgtcaagcgggaggagaccgccgagaatatcgtgcaggacctgatgctgtggctg
tgggaaaaccgcacggtattgtgtatcagcacttcgctcccaaaatatctgttcggcgcc
gtgcgcaataactgcctgacctatctggggcacgagtccatcgagcggcgcgtgctgggc
aatatccgcaataagatgtgcgagcagttcgaagtccccgacttcgacgtcgtcgaggaa
ctgcgcgaaaatatccgggcggccgtggccgatctcccggcctcctaccgtgaagcgttc
gaaatgagccgtttccagcgcaaaacctatgaagaaatcgccgccgtgctggaagtttcg
cccaaaacggtggattaccgcatccagcagtgtctgaaaatccttcgtgtcaaactcaag
gattacctgcctttgctgacgatgctgctggtcgtgaacgaatag
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