Alistipes finegoldii: Alfi_0327
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Entry
Alfi_0327 CDS
T02133
Name
(GenBank) mismatch repair ATPase (MutS family)
KO
K07456
DNA mismatch repair protein MutS2
Organism
afd
Alistipes finegoldii
Pathway
afd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Alfi_0327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afd03400
]
Alfi_0327
DNA repair and recombination proteins [BR:
afd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Alfi_0327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
ApoLp-III
DUF488-N3i
Motif
Other DBs
NCBI-ProteinID:
AFL76729
UniProt:
I3YIB1
LinkDB
All DBs
Position
complement(355436..357925)
Genome browser
AA seq
829 aa
AA seq
DB search
MIYPANFEQKIGFDRLREQVAARCTMRAACARLAGETFSTSAREIARRLTLADEMRLLLD
MEHEFPGGEYPDVDHIVAKLRVEGSFLDVEEVVTLHRALTVVGGIVAFILNREEQYPALH
ARSRGVAAFPEIVQRIDAIVDRFGNVKDNASPGLLEIRRAVREREGQAAKRLQAVLSAAK
NAGIVDADAQISIREGKAVIPVAAANKRKLQGFIHDESATGRTFYVEPVEVVEINNELRE
LEYAERREIVRILSEFTDSVRPDAELIADSGDYLAEIDMLRAKGRWASENGCVKPIVSTD
DRLMLKNARHPLLQQTLRAQGREVVPLDMQLDRRKHILVISGPNAGGKSVCLKTTGIVQY
MFQCGFLVPASEVSELPVFRSIFIDIGDEQSIDDDLSTYSSHLLNMKNMLAGASSATLVL
IDEFGSGTEPVIGGAIAEAILERLLAKGCYGVITTHYANIKYYASNTEGIANGAMMFDVQ
HIRPLFRLETGKPGSSFAVEIARKIGLPEEIIRIAGEKAGSDHINIEKQLREIARDKHYW
EQKRDRIRLTDRKVEELEQTYAEQLAKIKSERQEILKKAKQEAQRLIADANKQIENTIRT
IREAQAEKELTRLARRELDDFRDAVEQADTAEKDAQVAREIERIERRRQRRIERKTQRGE
AQAAAAPEPPKPREVETGSKVRMAGQDMVGVVQSVKGKKVQVAFGQILTTVDKKLLTVVS
NSEFREATRPQTARTVVSVDISARKLNFRDHIDVRGMRAAEALDAVQDFVDDALMVGVGS
VSILHGKGTGALKEEIRRYLRTVPEVESAKDEHADRGGAGITIVTFKMD
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgatttatcctgcaaacttcgagcagaagatcggcttcgaccggcttcgtgaacaggtt
gcggcgcgctgtaccatgcgtgccgcctgtgcgcggctggccggcgagaccttttcgacc
tcggcgcgcgagatcgcccggcggctgacgcttgccgacgagatgcgtctgctgctcgat
atggaacacgaatttcccggcggggagtatcccgacgtcgatcatatcgtcgccaagttg
cgcgtcgaaggctcattcctcgacgtcgaggaagtggtgacgctgcatcgtgcgctgacg
gtcgtcggcggcatcgtcgcgttcattctcaaccgcgaagaacaatatccggcgcttcac
gcccgcagccgcggcgtcgcggcctttcccgaaatcgtgcagcggatcgacgccatcgtc
gatcgtttcggcaacgtgaaggacaacgcttcgcccggtctgctggagatccggcgcgcc
gtccgcgaacgcgagggacaggccgccaaacgtctgcaggccgtgctgtcggccgccaag
aacgccggcatcgtcgatgccgacgcccagatttcgatccgcgaaggcaaagccgtgatt
ccggtcgccgcggccaacaagcgcaaactgcagggcttcatccacgacgagtcggctacc
ggacgcacgttctacgtcgagccggtcgaggtggtggagatcaacaacgaactgcgcgaa
ctggaatacgctgagcggcgcgagattgtccgcatcctctcggagttcaccgattcggtg
cgtcccgatgcggagctgatcgccgattcgggcgattacctcgccgagatcgacatgctg
cgcgccaaagggcgctgggcctcggagaacggctgcgtgaagccgatcgtctcgaccgac
gaccggctgatgctgaaaaacgcccgccatcccttgctgcagcagacgctccgggcgcag
ggccgcgaggtcgtgccgctcgacatgcagctggaccgtcgcaagcatatcctcgtcatt
tcggggcccaacgcgggcggcaagtcggtctgcctgaaaaccacgggcatcgtgcagtat
atgttccagtgcggattcctcgtgccggcgtcggaagtctccgaactgcccgtgttccgg
tcgatcttcatcgacatcggcgacgagcagtcgatcgacgacgatctttcgacctactcg
tcgcacctgctcaacatgaagaacatgctggccggagcctcctccgcgacgctggtgctg
atcgacgaattcgggtcgggtaccgagccggtcatcggcggcgccatcgccgaagccatc
ctcgaacgcctgctggccaaggggtgctacggtgttatcacgacccattacgccaatatc
aagtattatgcgtcgaacaccgaaggcatcgccaacggcgccatgatgttcgacgtgcag
catatccggccgctgttccggctcgaaacgggcaagcccggcagttcgttcgccgtggag
atcgcccgcaagatcggcctgccggaagagattatccgcattgcgggcgagaaggccggc
agcgaccatatcaacatcgaaaagcagctgcgcgaaatcgcccgtgacaaacattactgg
gaacagaaacgcgaccgcatccgcctgacggaccgcaaggtcgaagagctggagcagact
tacgccgagcagttggcgaagatcaaatccgagcggcaggagattctgaaaaaggccaag
caggaggcccagcggttgatcgccgacgccaacaagcagatcgagaatacgatcaggacc
atccgcgaagcgcaggccgaaaaagagctgacgcggctggcgcgccgcgagctggacgac
ttccgcgatgcggtcgagcaggccgatacggccgagaaggacgcgcaggtggcccgtgag
atcgagcgcatcgaacgccgccgccagcggcgcatcgagcgcaaaacccagcgcggcgaa
gcgcaggcggccgccgcccccgaaccgcccaaaccccgcgaggtcgaaaccggttccaag
gtccgcatggccgggcaggatatggtcggcgtggtgcagtcggtcaaggggaagaaagtg
caggtcgccttcggtcagatacttactacggtagacaagaaactgctgaccgtggtgtcg
aacagcgagttccgcgaagcgacgcgcccgcagacggcccgtacggtggtctcggtcgat
atttcggcccgcaaactcaatttcagggaccatatcgacgtgcggggcatgcgcgccgcc
gaagcgctggacgccgtgcaggatttcgtcgatgacgccttgatggtgggcgtggggtcg
gtttcgattctccacggcaagggtacgggggccttgaaagaggagatccgccgctatctg
cgcacggttcctgaggtcgaaagcgccaaggacgagcatgccgaccgcggcggggcgggc
attacgatcgtgacttttaagatggactga
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