Alistipes finegoldii: Alfi_0392
Help
Entry
Alfi_0392 CDS
T02133
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
afd
Alistipes finegoldii
Pathway
afd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Alfi_0392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afd03400
]
Alfi_0392
Enzymes [BR:
afd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Alfi_0392
DNA repair and recombination proteins [BR:
afd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Alfi_0392
Prokaryotic type
Alfi_0392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFL76788
UniProt:
I3YIH0
LinkDB
All DBs
Position
444645..445307
Genome browser
AA seq
220 aa
AA seq
DB search
MDVKIAPDWKELLAPEFEKPYFADLTQFVRQEYATRRIYPRGSNIFRAFDKCPFDKLKVV
IIGQDPYHGPGQANGLCFSVGDGVPFPPSLQNIFKEVADDTGTPPPATGNLDRWAEQGVL
LLNAVLTVRAHEAASHAGRGWETFTDAVVRAISERKQGVVYMLWGSYAQKKGAIADPQRN
FILKSVHPSPLSVYRGFFGCRHFSRANEYLRSIGKEPIVW
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaagatcgcccccgactggaaagagctgctcgctcccgaattcgaaaaaccc
tacttcgccgacctcacgcagttcgtacggcaggaatacgccacgcggcgcatctatccg
cgcggcagcaacatcttccgcgccttcgacaaatgcccgttcgacaagctgaaagtggtc
atcatcggtcaggacccctaccacggtcccggacaggccaacgggctctgcttctcggta
ggcgacggcgtgccgttcccgccctcgctgcagaatatcttcaaggaggtcgccgacgac
accgggacgccccctcccgcgacgggcaacctcgaccgctgggccgagcagggcgtactg
ctgctgaacgccgtgctgaccgtccgcgcacacgaagcggcgtcgcatgcgggccgcggc
tgggaaaccttcaccgacgccgtggtacgcgcgatctccgaacgcaaacagggcgtcgta
tacatgctttggggcagttacgcccagaaaaagggagctatcgcagacccgcagcggaat
ttcatcctcaagtccgtacacccgtcgccgctctcggtctaccgcggatttttcggctgc
cgccacttctcgcgcgccaacgaatatctccgcagcatcggcaaggagccgatcgtatgg
tga
DBGET
integrated database retrieval system
