Alistipes finegoldii: Alfi_0524
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Entry
Alfi_0524 CDS
T02133
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
afd
Alistipes finegoldii
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afd03400
]
Alfi_0524
DNA repair and recombination proteins [BR:
afd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Alfi_0524
Archaeal homologous recombinant proteins
Alfi_0524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_29
AAA_21
AAA_27
Trm112p
Motif
Other DBs
NCBI-ProteinID:
AFL76918
UniProt:
I3YIV0
LinkDB
All DBs
Position
599892..601877
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AA seq
661 aa
AA seq
DB search
MKTVIIKEIRLLNFKGLRNLTVEFDPALTEIYGRNGIGKTSIFDGFTWLLFGKNSEDRKQ
FGIKTYDEAGNIIPKLPHEVSAVLLVDGEVVTLCRRFNEKWTKKRGSAVEEFVGHEEERL
YNNVPCSVKEWNEKIAAICPEQVFKFITNPLYFTSQSVDTQRSMLFRMAGGITDEEIAAG
NADFAALLASLTGKTMEEYKKEIAAKKRRLKTEIEAIPERIDERRRDVPEAEDWAALEEE
LRQKQEALAKVEEQINDASKAYAAANEERLATVRKISDLKNERLALELKIKDEVQALYRS
DKAKQRAAAEDLERAKRDKAAAERDLANARREVEVCTDRRAELIKQWQSINARKLVFDEN
EFICPTCKRRFEIEEIESRQQEITENFNRRNAADLEENNRRGKENKLRMEEVNQYISEIE
EKIAEQVSIISEIEMSGILTAKLIEPDATPTIAANTEYIALGEQIAELEKEVSQPIAATE
DDFLREGRDSLTVGIDALKSRLMKREQIEKNNQRIAELEKSLRMQSEELAQLEGIEFTMA
AFSKARTEAIESKINGLFDFVKFRLFETQINGGEVETCEAMVNGVPFSDANTAGQFNAGI
DIINAICRFEGISAPIFADGSESVNTLHPTQSQVIRLFVSLDDKLVIKHNGNPAQPKSLF
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggtaatcattaaagaaatcaggctcctcaatttcaagggactgcgtaatctg
acggtcgagttcgaccccgcgctcacggagatttacgggcgcaacggcatcggcaaaact
tcgatcttcgacgggttcacatggctcctgttcggcaagaacagcgaggacagaaaacag
ttcggcatcaagacctacgacgaggccggaaacatcatcccgaaactcccgcacgaggta
tcggccgtcctgctggtcgatggcgaggtcgtaaccctctgccgtcggttcaatgaaaaa
tggacgaagaaacgcggctcggcggtcgaggagttcgtcggacatgaagaggaacgcctc
tacaacaacgtaccctgctcggtcaaggagtggaacgagaagatcgccgccatctgtccc
gaacaggtattcaagttcatcaccaatcccctctacttcacatcgcagtcggtagatacg
cagcggtcgatgctcttccgtatggccggaggtatcaccgacgaggagatagccgccgga
aatgccgattttgcggccctccttgcctcgctcacgggtaagacgatggaggaatacaag
aaagagatcgccgcgaaaaaacgccgtctgaaaaccgaaatcgaggccatccccgaacgt
atcgacgaacgccgccgcgatgtgccggaggcggaggattgggcggccctcgaagaagaa
ctccgccaaaaacaagaggcactcgcaaaggtcgaggaacagattaacgacgcatcgaaa
gcctatgccgccgcgaatgaggaacggcttgcaacggtgcgcaaaatcagcgacctgaaa
aacgaacggctggccctcgaactcaaaatcaaggacgaagtacaggccctctaccgttcc
gacaaggccaagcagcgggccgctgccgaggatttggagcgggcgaagcgcgacaaagcc
gccgccgagcgcgacctcgccaatgcccgccgagaggtagaggtatgcaccgatcgccgc
gccgagcttatcaagcaatggcaatcaatcaatgcccgcaagctcgtattcgatgagaac
gagtttatttgcccgacctgcaagcgccgtttcgagatcgaggagatcgagagccgccag
caggagattaccgagaacttcaatcgccggaatgccgccgacctcgaagagaacaatcgt
cgcggcaaggagaacaaactccgcatggaggaggtgaatcaatatatcagcgaaatcgag
gaaaagatcgccgagcaggtatctatcatctccgaaatcgaaatgagcggcatcctcacg
gcaaaactcatcgaacccgacgccaccccgaccatcgcggccaacaccgagtatatagca
ctcggagaacagatcgcagaactcgaaaaggaagtttcgcagcccatagccgccacagag
gatgattttttacgcgagggacgcgattctcttaccgtcggaatcgacgcgctcaaatcg
cggctgatgaagcgcgaacagatcgagaagaataaccagcgcatcgccgaactcgaaaag
tctctccggatgcagtcggaagaactcgcgcagttggagggtatcgagttcacgatggca
gctttctcgaaagcccgcacggaggccatcgaaagcaagatcaacgggctgttcgacttc
gtgaagttccgcctcttcgagacacagatcaacggaggtgaagtggaaacgtgcgaagca
atggtgaacggcgtgccgttctccgatgccaataccgcagggcaattcaacgcgggtatc
gacatcatcaacgcgatatgccgtttcgagggcatttccgccccgattttcgccgatggt
tcggaaagcgtcaataccctgcatccgacacaatcgcaggttatccgcctgttcgtatcg
ctcgacgacaagctcgtcatcaagcacaacggaaatccggctcaaccgaagagccttttc
gactaa
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