Alistipes finegoldii: Alfi_1083
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Entry
Alfi_1083 CDS
T02133
Name
(GenBank) TonB-linked outer membrane protein, SusC/RagA family
Organism
afd
Alistipes finegoldii
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Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
CarboxypepD_reg
Plug
CooC_C
Motif
Other DBs
NCBI-ProteinID:
AFL77437
UniProt:
I3YKB9
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Position
1164200..1167316
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AA seq
1038 aa
AA seq
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MKCIKIDNMLRTARLIMLAVLSGGIFAVPCGIYAQSAPRTVSGTVTDAATGEPLIGATVQ
VKGVTIGTTTDLNGMFSINLPANRKTLLFSYVGYEAQEIAVGRENYLNVALKQDANALDE
VVVVGYGQQKKGMLVSSVQSIAPAELRMPSSSLSTGFAGRLAGVIAVQRNGQPGADQADF
WIRGISTFGSATKPLIILDGVAIDANELNGLDPEIIESFSVLKDATATALYGSRGANGVM
IVTTKNGKNLDKPVINFRFETALSTPTSRPETVDAVTYMQMYNESVLTRGTGQIPYTQAK
IDGTRAGSNKYIYPDVDWYDEMFKNLAVNENFNFNIRGGSSRVDYFMSATVRHEEGMLKN
LSRDYFSYNNNYSVWRYAFQNNVNVNLTKSTKVSLKINTQLRDTHGPVKSSENIFGMIMN
GNPADMPITFPDDPTVNHIRWGGKAMVKNPVAEMVTGYKDEFQSVLNANLSLDQNFDFIT
EGLSASALISFKNYSYTQTSRSAGYNSYEISGTHTGDDGLEDYDLEIRGNEQSTTLATSS
STDGDRKIYIQGMINYNRSFGRHDVSAMVVYNQEETALGNPGSLFSSLPKRKQGLAGRLT
YGYDNRYLIEANFGYNGSENFAEGRRFGFFPSVAVGYVVSQEKFWAPIKKAVSYFKLRGS
YGLVGNDSEETRFMYMSDLSLSGAGYTTGADGEYTLSGPVYNRFENKKITWETGEKLNVG
VDLQFYNRLNVMVDLFQEVRSGIFLERGTVPAFLGTATTKVYGNLGKVRNRGLDLSMDYT
HQIGKDFFISAKGTFTFARNRVLEQDEPDYLQYPNLSRVGRSVNSFLLYEAQRLFIDNNE
VKYSPEQLLGGEIMAGDIKYVNQPDANGNYDNTINSNDRIYAGYPEVPEIVYGFGFSAQW
KGLDFSVFFQGTANTSLVMSGFHPFGINNNVKRNVMQFVADDYWSESNPNIYAAYPRLSV
VEYGNNTVASTYWLRDASFLKLKNAEIGYTYKKMRFYISGSNLLTFSKFKLWDPEQGGGS
GLKYPTQRVFNIGIQMTL
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtattaagattgataatatgttgcggactgcgcggttgattatgctcgccgtg
ttgtccggaggtattttcgcggttccttgcggaatatatgcacagtctgctccccgaacg
gtttccggtactgtcaccgatgcggccaccggagaaccgctgatcggagccaccgtacag
gtaaaaggtgtgaccatcggtactacgacggacctgaacggaatgttttcgatcaacctg
ccggcaaaccggaaaacactgcttttctcctatgtcgggtatgaagcccaggagattgcg
gttggccgtgagaattatctcaacgtggcgttgaaacaggacgccaatgcgttggacgaa
gttgtggtggtgggttacggccagcaaaagaaaggcatgctggtgagctcggtacagtcc
atcgctcccgcggaactgcggatgccttcgtcgagtttgtcgaccgggtttgccggacgc
ctggccggtgtgatcgccgtgcagcgcaatggacagcccggtgccgaccaggcggatttc
tggatacgcggtatctccacgttcggttccgcgaccaagccgttgatcatccttgacggt
gtggctatcgacgcgaatgaactgaacgggctggacccggagattatcgagagtttttcg
gtgctcaaggatgctacggcgaccgctctctatggttcgcggggagccaacggcgtgatg
atcgttacgacgaagaacggtaagaatctggataagccggtcattaattttcgcttcgag
acggctctttcgactccgacgagccgcccggaaacggtcgatgcggtgacctacatgcag
atgtacaacgagtcggttctgacgcgcggtacggggcagattccttatacgcaggcgaag
atcgacggtacgcgggccggcagcaacaaatatatctatccggatgtggattggtacgat
gagatgtttaaaaatttggcagtcaacgaaaactttaacttcaatatccgcggcggcagt
tcgagggtcgattacttcatgagcgccaccgtccgtcacgaggaaggtatgttgaagaac
ctgagccgggattacttctcctataacaacaattactcggtttggcgttacgctttccag
aacaatgtcaacgtcaatcttacgaagtctaccaaagtgtcgctgaaaatcaacacccag
ctccgggatacgcacgggccggtgaaaagcagcgaaaacattttcggaatgatcatgaac
ggcaatcccgccgatatgccgataacctttcccgacgatccgacggtaaaccatatccgt
tggggcggcaaagccatggtgaagaatcccgtggctgaaatggttaccggctacaaagac
gagttccagagcgtattgaacgccaatctgagtctggatcagaatttcgatttcatcacc
gaagggctttccgcttcggcgctgatctctttcaagaactattcctatacccagacatcg
cgttcggcaggttataattcctacgaaatttcgggtacgcatacgggcgatgacggattg
gaagactatgatctggagatccgcggcaacgagcaaagtacgacactcgccacctccagc
agtactgacggagaccgcaagatatatatccagggaatgatcaactataaccgcagtttc
ggccgtcatgacgtgagtgctatggtcgtgtataatcaggaggagactgcgctcggaaat
cccggtagtctgttcagttctttgcccaagcgtaaacagggccttgcgggccgtctgacc
tacgggtacgacaaccgttacctcatcgaggccaatttcggatacaacggcagtgagaat
ttcgccgagggacggcgcttcggctttttcccttcggtggccgtgggatacgtggtcagt
caggagaaattttgggcgcctatcaagaaggccgtctcttatttcaaactccgcggttcg
tacggtcttgtgggcaacgacagcgaggagacgcgtttcatgtacatgtcggacctctcc
ctttccggagccggatatacgacgggcgccgacggggagtatacgctgagcggtcccgtt
tacaaccgtttcgagaataagaagatcacttgggaaaccggagaaaaactcaatgtcggt
gtcgatctgcaattttataaccgactgaatgtaatggtcgatctgtttcaggaggtccgg
agcggtattttcctggaacgcggcacagttccggcttttctcggaacggctacgacaaaa
gtgtacggcaatctgggtaaggtgagaaatcgcggtttggatctctcgatggattatacc
catcagatcggcaaggatttcttcatttctgccaaaggaaccttcaccttcgcccgcaac
cgggtgctcgaacaggatgagccggattacctgcagtatcccaatctttcgcgggtcggc
cgttcggtcaattcgttcctgctttatgaggcgcaacgcctgtttatcgacaataacgag
gtgaaatacagtcctgaacaactgctgggcggtgaaatcatggccggcgacatcaaatac
gtcaaccagcccgatgcgaacggcaactacgacaacacgatcaattcgaacgaccgtatt
tatgcagggtatcccgaagtgccggagatcgtctacgggttcgggttttcagcgcagtgg
aaaggactcgatttctcggtcttcttccagggtacggccaatacgtcgctcgtgatgagc
ggattccatccgttcggtatcaataacaatgtcaagcgcaacgtcatgcagttcgtcgcc
gacgattactggagcgaaagcaatccgaatatctatgcggcctatccgcggttgagcgtc
gtggaatacggcaacaacacggttgcctcgacctactggctccgcgacgcgtcgttcctg
aaactgaaaaacgcggagatcggctatacctacaagaaaatgcgtttctacatcagcgga
tcgaacctgctgaccttctcgaaattcaagttgtgggaccccgaacagggcggcggatcg
ggactgaaatatccgacccagcgggttttcaacattggaatccagatgacgttataa
DBGET
integrated database retrieval system
