Alistipes finegoldii: Alfi_1100
Help
Entry
Alfi_1100 CDS
T02133
Name
(GenBank) RNA polymerase sigma-70 factor, Bacteroides expansion family 1
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
afd
Alistipes finegoldii
Pathway
afd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Alfi_1100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afd03021
]
Alfi_1100
Transcription machinery [BR:
afd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Alfi_1100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_23
Sigma70_ECF
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AFL77453
UniProt:
I3YKD5
LinkDB
All DBs
Position
1190570..1191034
Genome browser
AA seq
154 aa
AA seq
DB search
MFDRYYAPLCRFAAYWLRDRTSAEEIVLDTFTHIWQHAGELRISTSVRAYLFRAVRNRAL
NRLRDKRTDGIPIEGPEPLFTNPEALQLEADEMMLLVAEAVSQLPDRCREVFRKSREEGL
SNAAIADQMRISVKTVEAQITKALRRIRETLLRR
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgaccgttattacgccccgctttgcaggttcgcggcctactggctccgtgaccgc
acctctgccgaagagatcgtattggacacctttacgcacatctggcagcatgccggggaa
ctccgcatctcgacttccgtccgggcctatctgttccgcgccgtgcgcaaccgcgcgctc
aaccggcttcgcgacaaacgcaccgacggcatccccatcgagggacctgagccgctcttc
acgaacccggaagcattgcagctcgaagccgacgaaatgatgctgctggtcgccgaagcc
gtctcgcaactgcccgaccgctgccgcgaagtattccgcaaaagccgcgaagaggggctt
tccaacgccgcgatcgccgaccagatgcggatttcggtcaagaccgtcgaagcgcagatc
accaaagccctgcgacgcatccgcgaaacgctgctgcgcaggtga
DBGET
integrated database retrieval system
