Alistipes finegoldii: Alfi_1389
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Entry
Alfi_1389 CDS
T02133
Name
(GenBank) recombinational DNA repair protein (RecF pathway)
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
afd
Alistipes finegoldii
Pathway
afd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Alfi_1389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afd03400
]
Alfi_1389
DNA repair and recombination proteins [BR:
afd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Alfi_1389
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Alfi_1389
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AFL77734
LinkDB
All DBs
Position
complement(1530717..1531445)
Genome browser
AA seq
242 aa
AA seq
DB search
MKTYKGRGVVLHTLKYGDSSMVVYLLTDAGGRRSYMVQGVRSRNGRGSKLALFQPMFPVE
FEGLESPRQQMHRFKEVRGGFVLQSLPFDVRKSTMALFMAEVLYRLVREYDEPNEALFDF
VWNCVGALDSMDEGVANFHLWFLANLSRFLGFCPGNEYASGDWFDIREGLYTKTRPAHVS
YMNRECACMLRDFLECDVRCLSEIGLNRGQRVEFLNAVLVYFGYHLDAISAVQSVRILRE
VF
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacgtacaaggggcgcggggtagttctccatacgctcaaatacggcgattcatcg
atggtcgtctacctcctgaccgacgccggcggccgccgcagttacatggtgcagggcgtg
cgcagccgcaatggacgcggttcgaagctggcgctgttccagccgatgtttcccgtcgaa
ttcgaggggctggaatcgccgcggcagcagatgcaccgcttcaaggaggtgcggggcgga
ttcgtcttgcagagtctgcctttcgacgtgcgcaaatcgaccatggcgctcttcatggca
gaggttttgtaccgcctcgtcagggagtacgacgaacccaacgaagcgcttttcgacttc
gtgtggaactgcgtcggggcgctcgactcgatggacgagggcgtggccaatttccatttg
tggtttctcgccaacctgagccggtttctggggttttgtcccggcaacgaatacgcctcc
ggcgactggttcgatatccgtgaggggctttatacgaaaacccggcccgcgcacgttagc
tatatgaacagggagtgcgcctgcatgttgcgcgattttctggagtgcgacgtgcgctgt
ctctcggagatcggtctcaaccgcggccagcgggtcgagtttctcaacgccgtgctggtc
tatttcgggtaccacctcgacgccatcagcgccgtgcagtcggtccggattctgcgggag
gttttttag
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integrated database retrieval system
