Alistipes finegoldii: Alfi_1499
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Entry
Alfi_1499 CDS
T02133
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
afd
Alistipes finegoldii
Pathway
afd03030
DNA replication
afd03410
Base excision repair
afd03420
Nucleotide excision repair
afd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Alfi_1499
03410 Base excision repair
Alfi_1499
03420 Nucleotide excision repair
Alfi_1499
03440 Homologous recombination
Alfi_1499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afd03032
]
Alfi_1499
03400 DNA repair and recombination proteins [BR:
afd03400
]
Alfi_1499
Enzymes [BR:
afd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Alfi_1499
DNA replication proteins [BR:
afd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Alfi_1499
DNA repair and recombination proteins [BR:
afd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Alfi_1499
NER (nucleotide excision repair)
GGR (global genome repair) factors
Alfi_1499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AFL77842
UniProt:
I3YLH4
LinkDB
All DBs
Position
1669202..1672072
Genome browser
AA seq
956 aa
AA seq
DB search
MKKLFLVDAYALIFKYYYAFLGRPMRNRAGMNTSVVFGFVKFLRDIQKRERPDLLGVAFD
PKGGSFRREVFPEYKANRAETPEDILLSVPYVKRVLEAMCIPILEVEGYEADDVIGTLSQ
KGVEAGYEVFMVTPDKDYGQLVRDNCKIYKQKGADGSIEIVDRDSIREKYGIDDPVLVRD
ILALWGDASDNIPGVPGIGEKSACKLVQEWGTVENILDNVSKIKGKQGEKIAAWGDKLRL
AKHLTTICLDVPIPFRPEDLTVCDPHIDELKAVFAELDFKAFMNDLTNLAPPEALPEGPR
QEAQTQLAEMARAKSAAAKRAALVGQGNLFGDPVVEMPAASDVPAAELQAEAMQFKTAQT
TPHDYRLVEDAAQLRDVVDEVGKYEEFCFDTETTGFDIFNDRIVGMSLAVKPFEAWYIPF
KEENTAEYAEIVRPLFENDRIAKIGQNIKFDLMVLRQLGLEIRGRKYDTMILHYLLDPES
RHNMNALAEKYLNYKPIEIETLIGKGSKQLTMDLVNVERVKEYAAEDADVTLRLKHALYP
QIEELGLQHLYFEIEEPMIAVLADIEMAGVRIDSEALAVYSVELSRRLAELEAAIREEAG
ESQLNINSARQLGEVLFGKMRIAEKPKMTKTKQFCTDEDYLQSFAHKHRIVDLILEYRGV
KKLLSTYVEALPQLVNRRTGRIHTSFNQAVTATGRLSSTNPNLQNIPVREEMGRRIRRAF
IPSDEEHLLLSADYSQVELRLMAHLSGDESLIAAFAHGEDIHAATAAKLFNKTLGEVTSE
ERRRAKTANFGIIYGISAFGLSQRLEIPRKEAKEIIDGYFASYPKVQEYMDNVVAKAKEE
GFVSTIFGRRRYLNDIASHNAIARGLAERNAVNAPIQGSAADIMKIAMINVHRRFAAEGI
RSKVILQVHDELVVDMLRSEQERVVAIVTEAMESAAALKVRLVVDYGVGGNWLEAH
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactttttctcgttgacgcctatgcgttgatcttcaagtattactatgctttt
ctgggccgtccgatgcgcaaccgcgcgggcatgaacacctcggtggtgttcggcttcgtc
aagttcctgcgcgacattcagaagcgcgaacggcccgacctgctgggcgtggcgttcgac
cccaagggcggcagtttccgccgcgaggtttttccggagtacaaggccaaccgcgccgag
actcccgaagacatcctgctttcggttccttatgtgaaacgggtgctggaggcgatgtgc
attccgattctggaggtcgaaggctacgaggccgacgacgtgatcggcaccctgtcgcag
aagggcgtcgaagccggttacgaggtcttcatggtgacccccgacaaggactacggccag
ctggtgcgcgacaactgtaagatttacaagcagaaaggcgcggacggaagcatcgagatc
gtggaccgcgattcgatccgcgagaagtacggcatcgacgatccggtccttgtgcgcgac
atcctcgcgttgtggggcgacgcttcggacaacattcccggcgtgccgggcatcggcgag
aagagcgcctgcaaactggtgcaggagtggggaacggtggagaacatcctcgacaacgtg
tcgaagatcaagggcaagcagggcgagaaaatcgccgcgtggggcgataaactgcgtctc
gccaagcacctgaccacgatctgtctcgacgtgccgattcccttccggcctgaggacctt
acggtctgcgatccccatatcgacgaactcaaggccgttttcgcagaactggatttcaag
gcgtttatgaacgacctgacgaacctcgcccctcccgaagccctgcccgaaggtccccgg
caggaggcgcagacgcagctggccgagatggcccgcgccaagtcggcggccgcgaaacgg
gccgcgctggtcggtcagggcaacctcttcggcgacccggtcgtggagatgcctgcggcg
tcggacgttcccgccgccgaattgcaggccgaagcgatgcagttcaagacggcgcagacc
acgcctcacgactacagactcgtggaggacgccgcgcagctgcgcgacgtggtggacgaa
gtcgggaaatacgaagagttctgcttcgacaccgagacgacgggattcgacatcttcaac
gaccgcatcgtcggcatgtcgctggctgtgaagcctttcgaagcgtggtacattcctttc
aaggaggagaatacggcggaatacgccgaaatcgtgcggccgcttttcgaaaacgaccgg
atcgccaagatcggccagaatatcaagttcgacctgatggtcctgcggcagctgggactc
gaaatccggggccgcaagtacgatacgatgatcctgcactacctgctcgatcccgaatcg
cgccacaacatgaacgcccttgcggagaaatacctcaactacaagccgatcgagatcgaa
accctgatcggcaaaggctccaagcagctgacgatggatctggtgaacgtcgagcgcgtc
aaggagtacgccgccgaggacgccgacgtcacgctgcggctcaagcatgcgctctatccg
cagatcgaagagcttggcctgcaacacctctatttcgaaatcgaggagccgatgatcgcc
gtgctggccgacatcgagatggcgggcgtgcggatcgactccgaggcgctggccgtctat
tccgtggagctgagccgcaggctggccgagctggaggccgcgattcgcgaggaggccggc
gaatcgcagctcaacatcaactcggcgcgtcagctgggcgaggtgctgttcggcaaaatg
cgcatcgccgagaagcccaagatgaccaaaaccaagcagttctgcaccgatgaggattac
ctgcagtcttttgcgcacaaacaccgcatcgtcgatctgatcctcgaataccggggtgtc
aagaaactcctttcgacctatgtcgaggcgctgccccagctggtcaaccgccgtacggga
cgcatacacacctctttcaatcaggctgttaccgctacggggcgcctttcgtccacgaat
cccaacctgcagaatatccccgtgcgcgaagagatgggccgccgcatccgcagggcgttc
atcccctccgacgaggagcatctgctgctctcggccgactacagtcaggtcgaactgcgg
ctgatggcgcatctttcgggcgacgaatcgctgatcgcggcctttgcgcacggcgaggac
atccacgccgcgacggccgccaaactgttcaacaaaaccctcggcgaagtgacctccgag
gagcgccgccgcgccaagaccgctaatttcggcatcatctacggcatttcggccttcggc
ctgagccagcggctggagattccccgcaaggaggccaaagagattatcgacggctacttc
gcatcctatcccaaggtgcaggagtatatggacaacgtggttgccaaggccaaggaagag
ggcttcgtctcgacgattttcggccggcgccgctacctcaacgacatcgcttcgcacaac
gccatcgcccgcggccttgccgagcgaaacgccgtgaacgctccgattcaaggctctgcg
gccgacatcatgaagatcgccatgatcaacgtacaccgccgtttcgccgctgaaggcatc
cgctcgaaggtgatcctgcaggtgcatgacgaactggtcgtcgatatgctccgctccgag
caggagcgcgtcgtggccatcgtcaccgaagccatggagtccgccgccgcgctcaaagtc
cgtctggtggtggattacggcgtgggcggcaactggctcgaagcgcattga
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