Alistipes finegoldii: Alfi_1632
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Entry
Alfi_1632 CDS
T02133
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
afd
Alistipes finegoldii
Pathway
afd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Alfi_1632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afd03400
]
Alfi_1632
Enzymes [BR:
afd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Alfi_1632
DNA repair and recombination proteins [BR:
afd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Alfi_1632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA_C
AAA_30
AAA_19
Zn_ribbon_6
nSTAND6
IBR_1
Zn_ribbon_FGT1_1
nSTAND3
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
AFL77965
UniProt:
I3YLU7
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All DBs
Position
1835621..1837876
Genome browser
AA seq
751 aa
AA seq
DB search
MPLYADIVLPLAQPAYTFAVPEGMHVAEGTAVAVQFGPRKFYTGVVWRVHDRRPPFRTIK
SIQRVLYDAPLLSAQQKALWEWIAAYYMCSAGEVMRVALPSLMKPSGDTEEEFAEDEFRP
RTECYVALARELHDEGRLHEVFEKLGRRAPKQYEALLEIASAGDETRISTGEVARRLLRA
DYAVLHALERKGHIVCTERERTVERGGSAFRLPELTAPQREALGSLREQFAEKPAALLHG
VTGSGKTEIYIHLIAETLARGGDVLLLVPEIALTAQLIGRMERIFGSRVTPYHSKLTNRR
RTETYLRLNRSQGGEFVVGVRSSIFLPLRHLQLIIVDEEHDASYKQADPAPRYNARDCAV
VMARLWGGRTLLGSATPSLETWLNAEGGKYGRAVLAERYGDARPPEIFVSDTIRAAKRGE
RHAHFNKLLLDKMEETLGRGEQVMLFQNRRGFSPYVECSQCGWTARCPHCNVTLTYHKGG
ARLVCHYCGYTVPVPAKCPSCEVTEVLPRGFGTEKVEEEIARLFPEARVARLDRDSVTSE
RAFNAIISDFEARKTDILVGTQMITKGFDFGGVSLVGILNADNLLNNPDFRAAERAFQLM
LQVAGRAGRRSDGGEVVIQTSEPGHPVIRQVVAGDFAGMARMQLSEREAFFYPPYARLTS
LTLRHRDVALLRRGVTELAARLRVRFGRRVLGPMTPPVDRIRGEYLAGLLLKIESGASSA
KARALLAAELKAFAENPEFKTITFICNVDPQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgcccctctatgccgacatagtactgccgctggcgcagcccgcctatacgttcgccgtg
cccgaagggatgcacgtggcggaggggacggcggtagccgtgcagttcgggccccgcaaa
ttctatacgggcgtcgtttggcgggtgcatgaccgccgtccgccgttcaggacaatcaaa
tccatacagcgcgtgctgtacgacgcgcccctgctctcggcgcagcaaaaggcgctctgg
gagtggatcgccgcgtactacatgtgttcggcgggcgaggtgatgcgcgtggcgctgccg
tcgctgatgaagccttcgggcgataccgaggaggagttcgccgaagacgagttccgcccc
cgcacggagtgctacgtggcgctggcgcgggagctgcacgacgaagggcgcctgcacgag
gtcttcgagaagctcggacggcgcgcgcccaagcagtacgaagccctgctggagatcgcg
tcggcgggggacgagacccggatttcgacgggcgaggtggcccgccgcctgctgcgggcc
gactatgccgtgctgcatgcgctggagcgcaaggggcatatcgtctgcacggagcgcgaa
cgcaccgtcgagcggggcggctcggcgttccggctgcccgaactgaccgcgccgcagcgc
gaagcgctcggttcgctgcgggagcagttcgccgaaaagcctgcggcgctgctgcacggc
gtgacggggtcggggaagaccgaaatttacatacacctgatcgccgaaacgctggcgcgg
ggcggcgacgtgctgctgctcgtgcccgaaatcgccctgacggcgcagctgatcgggcgc
atggagcgcatcttcggcagccgcgtgaccccctatcattcgaaacttacgaaccgccgc
cgcacggagacctacctgcggctgaaccgctcccaagggggcgagttcgtcgttggcgtg
cggtcgtcgatatttctgccgctcaggcatctgcagctgataatcgtggacgaggagcac
gacgccagctacaagcaggccgatcccgcgccccgctacaacgcccgcgactgcgccgtg
gtgatggcccgcctgtggggcggccgcacgctgctgggaagcgccacgccgtcgctcgaa
acgtggctcaacgccgagggcgggaagtacggccgcgccgtgctggcggagcgttacggc
gacgcccggccgcccgaaatattcgtttcggatacgatccgcgccgccaagcgcggcgag
cggcatgcgcatttcaacaaactgctgctggacaagatggaagagacgctggggcggggc
gagcaggtgatgctgttccagaaccgccgcggattctcgccctacgtcgagtgttctcag
tgcgggtggacggcccgctgtccgcactgcaacgtgacgctgacctaccacaagggcggc
gccagactcgtctgccactactgcggttacacggtcccggtgccggcgaagtgcccttcg
tgcgaggtgacggaggtgctgccgcggggattcggcacggagaaggtcgaggaggagatc
gcccggctcttccccgaagcccgcgtcgcccggctggaccgcgacagcgtgacctccgag
cgggcgttcaacgccataatctccgatttcgaagcccgcaagaccgatattctggtcggg
acgcagatgattacgaagggattcgacttcggcggcgtgtcgctggtggggattctcaat
gccgacaacctgctgaacaaccccgatttcagggctgcggagcgggcctttcagctcatg
ctgcaggtcgccggacgcgccggacgccgctcggacggcggcgaggtggtgattcagacc
tccgagccggggcatcccgtgatccggcaggtcgtggcgggcgatttcgccgggatggcc
cgcatgcagctctccgaacgcgaagcgttcttctatccgccctatgcgcggctgacctcg
ctgacgctgcgccaccgcgacgtcgcgctgctgcgccgcggcgtcacggagctggcggcg
cgcctgcgcgtcaggttcggccgccgcgtgctggggccgatgacgcccccggtggaccgc
atccgcggcgagtatctcgcgggtctgttgctcaagatcgaaagcggcgcttcgtcggcc
aaggcccgcgcactgctggccgccgagctgaaggcgttcgccgaaaatcccgaattcaaa
acgatcaccttcatctgcaatgtcgatcctcagtga
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