Alistipes finegoldii: Alfi_1650
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Entry
Alfi_1650 CDS
T02133
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
afd
Alistipes finegoldii
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afd03016
]
Alfi_1650
Enzymes [BR:
afd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Alfi_1650
Transfer RNA biogenesis [BR:
afd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Alfi_1650
Prokaryotic type
Alfi_1650
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AFL77983
UniProt:
I3YLW5
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All DBs
Position
complement(1861642..1862358)
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AA seq
238 aa
AA seq
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MKEPIDLRGLNFEEGYIAVLDKPLRWTSTDVVRKIKFTLRRLGYRKIKVGHAGTLDPLAT
GILLVCIGRATKMVDALQAEEKEYVADVMLGATTPSYDLEHPVDRTFPTEHITREKVLAA
LSSLTGERLQEPPVYSAKKIDGTRAYELARAGEEVTMRKATVNIYELELLEYDLPRIRIR
VRCSKGTYIRSLAHEIGQALESGAHLTSLRRTRSGGFTLEKAFEFEEFLKKLEELETK
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaccgatcgacctgcggggtctcaacttcgaagagggttatatcgccgtactg
gacaagcccctgcgctggacctcgaccgatgtggtccgcaaaatcaaattcacgctgcgc
cgcctcggctaccggaaaatcaaggtgggccacgccggcacgctcgatccgctcgccacc
ggcatcctgctggtctgcatcggccgcgccaccaagatggtcgatgcgctgcaggccgag
gagaaggagtacgtcgccgacgtgatgctgggcgccacgacccccagctacgacctcgaa
caccccgtcgaccgcaccttccccaccgaacatatcacgcgcgaaaaggtcctcgcagcc
ctctcttcgctcacgggcgagcggcttcaggagcctcccgtctactcggccaagaagatc
gacggcacgcgcgcctacgagctggcccgcgccggcgaggaggtcacgatgcgcaaggcg
acggtcaacatctacgaactggaactgctggagtacgaccttccccgcatccgcatccgc
gtgcggtgcagcaaaggcacctacatccgctcgctggcccacgaaatcggacaggcgctc
gaaagcggcgcccacctgacgtcgctgcgccgcacccgcagcggcggctttacgctcgaa
aaagcctttgaattcgaagaatttctcaaaaagttggaggaacttgaaacaaaatag
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